RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 IBTKQ9P2D0 1353 aaPredicted RBP1.71□□□□□ -2.14
SHCBP1-202ENST00000563219 TRAV8-1A0A0A6YYK1 113 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 LINC00862A6NCI5 91 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 PPP5D1E7EU14 171 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 G3V2T6 193 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 H3BSA7 217 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 M0R381 172 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 SLC17A3O00476 420 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 KPNA4O00629 521 aaPredicted RBP1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 PDE6DO43924 150 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 TPST1O60507 370 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 BANF1O75531 89 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 OR2J2O76002 312 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 SOGA1O94964 1423 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 IFNA1P01562 189 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 IFNGP01579 166 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 C8orf88P0DMB2 117 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 RNASE2P10153 161 aaKnown RBP1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 HIST1H1EP10412 219 aaKnown RBP1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 IFI30P13284 250 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 CDK2P24941 298 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 AKR1C3P42330 323 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 EIF2B2P49770 351 aaKnown RBP1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 AKR1D1P51857 326 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 HLA-DRB3P79483 266 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 IHHQ14623 411 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 SMIM21Q3B7S5 101 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 LIN52Q52LA3 116 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 TNFAIP8L3Q5GJ75 292 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 LPCAT3Q6P1A2 487 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 TNFAIP8L2Q6P589 184 aaPredicted RBP1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 WDR59Q6PJI9 974 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 GRINAQ7Z429 371 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 LINC00304Q8N9R0 145 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 OR5C1Q8NGR4 320 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 OR10A6Q8NH74 314 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 CD200R1Q8TD46 325 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 C1orf54Q8WWF1 131 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 ASB17Q8WXJ9 295 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 IMP4Q96G21 291 aaKnown RBP1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 PPP3R2Q96LZ3 170 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 OR8B2Q96RD0 313 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 PDCD10Q9BUL8 212 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 ABCG5Q9H222 651 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 OR51I1Q9H343 314 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 VPS29Q9UBQ0 182 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 LSM5Q9Y4Y9 91 aaKnown RBP1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 NISCHQ9Y2I1 1504 aa1.7□□□□□ -2.14
SHCBP1-202ENST00000563219 ZNF518AQ6AHZ1 1483 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 NLRC5Q86WI3 1866 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 CEP152O94986 1710 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 TRPM3Q9HCF6 1732 aaPredicted RBP1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 CHD5Q8TDI0 1954 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 PLCH2O75038 1416 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 TAF1LQ8IZX4 1826 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 IGHV3OR15-7A0A075B7D8 119 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 TEX50A0A1B0GTY4 177 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 C5orf49A4QMS7 147 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 OR6C6A6NF89 314 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 SMIM9A6NGZ8 99 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 CLDN24A6NM45 220 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 A8MWP6 167 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 K7EP13 123 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 GPR31O00270 319 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 DLEU1O43261 78 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 GSTZ1O43708 216 aaPredicted RBP1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 SYNGR2O43760 224 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 S1PR2O95136 353 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 FAM107AO95990 144 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 SOD1P00441 154 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 OPN1SWP03999 348 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 HLA-DQB2P05538 268 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 SERPINA7P05543 415 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 BPGMP07738 259 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 IL3P08700 152 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 CST2P09228 141 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 TSPAN19P0C672 248 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 ESDP10768 282 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 ALOX5APP20292 161 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 RPL35P42766 123 aaKnown RBP1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 CA7P43166 264 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 MAP2K4P45985 399 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 PSMD8P48556 350 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 RBP2P50120 134 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 FABP5Q01469 135 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 EDDM3AQ14507 147 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 FAM229BQ4G0N7 80 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 RNASE10Q5GAN6 216 aaKnown RBP1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 C9orf64Q5T6V5 341 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 HIST2H3PS2Q5TEC6 136 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 FAM78BQ5VT40 261 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 TMEM42Q69YG0 159 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 SMARCD3Q6STE5 483 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 CTAGE3PQ8IX95 158 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 LRRC18Q8N456 261 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 ZNF283Q8N7M2 679 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 OR1M1Q8NGA1 313 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 OR9Q1Q8NGQ5 310 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 OR51H1Q8NH63 302 aa1.69□□□□□ -2.14
SHCBP1-202ENST00000563219 OR13C6PQ8NH95 151 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms