RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 PPP1CCP36873 323 aaKnown RBP3.57□□□□□ -1.84
SMG1-206ENST00000562668 SRP14P37108 136 aaKnown RBP3.57□□□□□ -1.84
SMG1-206ENST00000562668 DYNLT3P51808 116 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 RIPPLY3P57055 190 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 TAS2R20P59543 309 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 UBA52P62987 128 aaKnown RBP3.57□□□□□ -1.84
SMG1-206ENST00000562668 SLC9A3R2Q15599 337 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 FAM189A2Q15884 450 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 AANATQ16613 207 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 LTC4SQ16873 150 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 IGSF11Q5DX21 431 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 TPTE2P1Q5T6R2 138 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 MINOS1Q5TGZ0 78 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 OR52W1Q6IF63 320 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 CCBE1Q6UXH8 406 aaPredicted RBP3.57□□□□□ -1.84
SMG1-206ENST00000562668 MOB1BQ7L9L4 216 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 TRAPPC6BQ86SZ2 158 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 HOGA1Q86XE5 327 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 LAX1Q8IWV1 398 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 GVQW1Q8N7I0 195 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 OR13D1Q8NGV5 346 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 NEK7Q8TDX7 302 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 GPX8Q8TED1 209 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 RBMXL1Q96E39 390 aaKnown RBP3.57□□□□□ -1.84
SMG1-206ENST00000562668 C5orf30Q96GV9 206 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 YPEL2Q96QA6 119 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 ABHD1Q96SE0 405 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 CMSS1Q9BQ75 279 aaKnown RBP3.57□□□□□ -1.84
SMG1-206ENST00000562668 IFI27L2Q9H2X8 130 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 RPS10P5Q9NQ39 176 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 OR1A1Q9P1Q5 309 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 RSL24D1Q9UHA3 163 aaKnown RBP3.57□□□□□ -1.84
SMG1-206ENST00000562668 JPT1Q9UK76 154 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 TRAPPC2LQ9UL33 140 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 MINOS1-NBL1R4GNA1 71 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 AGRNO00468 2067 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 hCG_1809904A0A1W2PP81 198 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 A0A1W2PPE2 198 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 A0A1W2PR64 198 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 A0A1W2PRV1 198 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 A6NDX4 124 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 FABP7O15540 132 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 TCF21O43680 179 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 CHST1O43916 411 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 TPPPO94811 219 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 IGHV3-7P01780 117 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 ARG1P05089 322 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 NFYBP25208 207 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 HTR1DP28221 377 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 ZNF816Q0VGE8 651 aaPredicted RBP3.56□□□□□ -1.84
SMG1-206ENST00000562668 EIF4EBP1Q13541 118 aaPredicted RBP3.56□□□□□ -1.84
SMG1-206ENST00000562668 EBI3Q14213 229 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 ARL6IP1Q15041 203 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 ZNF660Q6AZW8 331 aaPredicted RBP3.56□□□□□ -1.84
SMG1-206ENST00000562668 CNIH2Q6PI25 160 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 ZNF833PQ6ZTB9 187 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 H1FOOQ8IZA3 346 aaPredicted RBP3.56□□□□□ -1.84
SMG1-206ENST00000562668 TMEM86BQ8N661 226 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 Q8N6K4 173 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 OR4A4PQ8NGN8 299 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 AP3S1Q92572 193 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 DGCR14Q96DF8 476 aaKnown RBP3.56□□□□□ -1.84
SMG1-206ENST00000562668 MALSU1Q96EH3 234 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 S100A16Q96FQ6 103 aaKnown RBP3.56□□□□□ -1.84
SMG1-206ENST00000562668 CHIAQ9BZP6 476 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 OR2S2Q9NQN1 319 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 DIABLOQ9NR28 239 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 NDUFA13Q9P0J0 144 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 DPM3Q9P2X0 92 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 EXTL2Q9UBQ6 330 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 ANXA10Q9UJ72 324 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 MGAT4AQ9UM21 535 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 POMT1Q9Y6A1 747 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 V9GYH0 126 aa3.56□□□□□ -1.84
SMG1-206ENST00000562668 IGLV7-46A0A075B6I9 117 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 IGKV1D-13A0A0B4J2D9 117 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 MEIS3P1A6NDR6 274 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 LEUTXA8MZ59 168 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 OOSP1A8MZH6 123 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 ZNF736B4DX44 427 aaPredicted RBP3.55□□□□□ -1.84
SMG1-206ENST00000562668 CTDSPLO15194 276 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 LANCL1O43813 399 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 FBP1P09467 338 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 FRMD6-AS1P0C7T7 363 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 SAA2P0DJI9 122 aaPredicted RBP3.55□□□□□ -1.84
SMG1-206ENST00000562668 IGKV1-13P0DP09 117 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 ETV6P41212 452 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 KIR2DS4P43632 304 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 OR3A3P47888 321 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 GNG10P50151 68 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 RAB13P51153 203 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 PRRX1P54821 245 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 GNG2P59768 71 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 PITPNAQ00169 270 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 GAGE2BQ13066 116 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 BAMBIQ13145 260 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 UBE2V1Q13404 147 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 MADCAM1Q13477 382 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 ARFRP1Q13795 201 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 KIR2DS1Q14954 304 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms