RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 WDR89Q96FK6 387 aaPredicted RBP12.57□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 CNBD2Q96M20 576 aa12.57□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 CCDC140Q96MF4 163 aa12.57□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 SRD5A3Q9H8P0 318 aa12.57□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 SELENOKQ9Y6D0 94 aa12.57□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 TMEM235A6NFC5 223 aa12.56□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 NPIPB5A8MRT5 1133 aa12.56□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 LGALS9O00182 355 aa12.56□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 GGCTO75223 188 aaKnown RBP12.56□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 OR2C1O95371 312 aa12.56□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 IGHV3-23P01764 117 aa12.56□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 CTXN2P0C2S0 81 aa12.56□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 GALP22466 123 aa12.56□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 GUCA2BQ16661 112 aa12.56□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 PUSL1Q8N0Z8 303 aaKnown RBP12.56□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 OR4S2Q8NH73 311 aa12.56□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 TMEM167AQ8TBQ9 72 aa12.56□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 CACNG8Q8WXS5 425 aa12.56□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 FANCD2OSQ96PS1 177 aa12.56□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 OR2A7Q96R45 310 aa12.56□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 DCSTAMPQ9H295 470 aa12.56□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 FBXL7Q9UJT9 491 aa12.56□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 SPATA2Q9UM82 520 aa12.56□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 S4R3C0 116 aa12.56□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 OR11H12B2RN74 326 aa12.55□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 SSX5O60225 188 aa12.55□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 SLC22A5O76082 557 aa12.55□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 ZNF735P0CB33 412 aa12.55□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 AREGP15514 252 aa12.55□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 RPL27AP46776 148 aaKnown RBP12.55□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 FAM209BQ5JX69 171 aa12.55□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 CNIH2Q6PI25 160 aa12.55□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 IZUMO2Q6UXV1 221 aa12.55□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 VSTM2AQ8TAG5 236 aa12.55□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 TCTEX1D2Q8WW35 142 aa12.55□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 FYTTD1Q96QD9 318 aaKnown RBP12.55□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 GPHA2Q96T91 129 aa12.55□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 HSD17B10Q99714 261 aaKnown RBP12.55□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 SLC2A9Q9NRM0 540 aa12.55□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 TAS2R8Q9NYW2 309 aa12.55□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 TECRQ9NZ01 308 aaKnown RBP12.55□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 ANXA10Q9UJ72 324 aa12.55□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 BLOC1S6Q9UL45 172 aa12.55□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 NOTOA8MTQ0 251 aa12.54□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 NDUFB8O95169 186 aa12.54□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 CRYGCP07315 174 aa12.54□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 MYOD1P15172 320 aa12.54□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 CBLN1P23435 193 aa12.54□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 CLEC19AQ6UXS0 136 aa12.54□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 GPHB5Q86YW7 130 aa12.54□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 MFSD4AQ8N468 514 aa12.54□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 TMEM213A2RRL7 107 aa12.53□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 DPPA5A6NC42 116 aa12.53□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 CGB1A6NKQ9 187 aa12.53□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 JTBO76095 146 aa12.53□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 PSMB6P28072 239 aa12.53□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 MAS1LP35410 378 aa12.53□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 ARL3P36405 182 aa12.53□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 KLK9Q2XQG4 91 aa12.53□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 TMEM61Q8N0U2 210 aa12.53□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 IL17DQ8TAD2 202 aa12.53□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 TXNL4BQ9NX01 149 aaKnown RBP12.53□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 MLXQ9UH92 298 aa12.53□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 KLK9Q9UKQ9 250 aa12.53□□□□□ -0.4
VPS9D1-AS1-201ENST00000562298 A8MWP6 167 aa12.52□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 REG1AP05451 166 aa12.52□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 CTRB1P17538 263 aa12.52□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 FGF9P31371 208 aaPredicted RBP12.52□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 GNG2P59768 71 aa12.52□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 UBE2UQ5VVX9 321 aa12.52□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 CTRB2Q6GPI1 263 aa12.52□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 SSX9Q7RTT3 188 aa12.52□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 LGALS14Q8TCE9 139 aa12.52□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 DAPK2Q9UIK4 370 aa12.52□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 MFSD2BA6NFX1 497 aa12.51□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 TNFSF12O43508 249 aa12.51□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 PTHLHP12272 177 aa12.51□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 HSPA13P48723 471 aa12.51□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 RPL8P62917 257 aaKnown RBP12.51□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 ZNF66Q6ZN08 573 aa12.51□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 VCX3BQ9H321 246 aa12.51□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 IGLV11-55A0A075B6I3 123 aa12.5□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 ZNF320A2RRD8 509 aa12.5□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 SCGNO76038 276 aa12.5□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 HRASP01112 189 aa12.5□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 HLA-GP17693 338 aa12.5□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 GABARAPL2P60520 117 aa12.5□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 TIMM50Q3ZCQ8 353 aa12.5□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 ZNF57Q68EA5 555 aaPredicted RBP12.5□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 OR4A47Q6IF82 309 aa12.5□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 SFXN4Q6P4A7 337 aa12.5□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 UNQ9165/PRO28630Q6UXU0 137 aa12.5□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 SLC16A13Q7RTY0 426 aa12.5□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 UXS1Q8NBZ7 420 aa12.5□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 EEF1AKMT3Q96AZ1 226 aa12.5□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 CCL28Q9NRJ3 127 aa12.5□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 BET1LQ9NYM9 111 aa12.5□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 RRP15Q9Y3B9 282 aaKnown RBP12.5□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 SCAF4O95104 1147 aaKnown RBP12.49□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 DHFRP00374 187 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms