RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 SPANXN5Q5MJ07 72 aa9.6□□□□□ -0.87
PCAT1-202ENST00000561978 BTNL3Q6UXE8 466 aa9.6□□□□□ -0.87
PCAT1-202ENST00000561978 NRGNQ92686 78 aa9.6□□□□□ -0.87
PCAT1-202ENST00000561978 RBMXL1Q96E39 390 aaKnown RBP9.6□□□□□ -0.87
PCAT1-202ENST00000561978 SLC35B3Q9H1N7 401 aa9.6□□□□□ -0.87
PCAT1-202ENST00000561978 RBKSQ9H477 322 aa9.6□□□□□ -0.87
PCAT1-202ENST00000561978 TRGV10A0A0A0MS01 117 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 A0A1W2PN81 502 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 CYSRT1A8MQ03 144 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 RBFOX2O43251 390 aaKnown RBP eCLIP9.59□□□□□ -0.87
PCAT1-202ENST00000561978 HPRT1P00492 218 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 DUTP33316 252 aaKnown RBP9.59□□□□□ -0.87
PCAT1-202ENST00000561978 CHRNA7P36544 502 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 PPT1P50897 306 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 BSPH1Q075Z2 132 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 OR2B11Q5JQS5 317 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 STUMQ69YW2 141 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 TMEM14EPQ6UXP3 125 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 ZNF525Q8N782 197 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 DCTN5Q9BTE1 182 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 SCRT1Q9BWW7 348 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 ZNF665Q9H7R5 613 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 SEPSECSQ9HD40 501 aaKnown RBP9.59□□□□□ -0.87
PCAT1-202ENST00000561978 BIN3Q9NQY0 253 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 CALYQ9NYX4 217 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 KIAA1456Q9P272 454 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 AKAP9Q99996 3911 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 DSCAMO60469 2012 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 DPRXA6NFQ7 191 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 C9JQL5 133 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 PLAUP00749 431 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 CD55P08174 381 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 CGB3P0DN86 165 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 CGB7P0DN87 165 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 LOXL3P58215 753 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 BRWD1-AS2P59051 145 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 LTC4SQ16873 150 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 LRRC75BQ2VPJ9 315 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 SPRNQ5BIV9 151 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 FAM53AQ6NSI3 398 aaPredicted RBP9.59□□□□□ -0.87
PCAT1-202ENST00000561978 ADAM5Q6NVV9 412 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.59□□□□□ -0.87
PCAT1-202ENST00000561978 PINX1Q96BK5 328 aaKnown RBP9.59□□□□□ -0.87
PCAT1-202ENST00000561978 ESRP2Q9H6T0 727 aaKnown RBP9.59□□□□□ -0.87
PCAT1-202ENST00000561978 SLC35D1Q9NTN3 355 aa9.59□□□□□ -0.87
PCAT1-202ENST00000561978 TRAV1-1A0A0B4J248 108 aa9.58□□□□□ -0.88
PCAT1-202ENST00000561978 KBTBD11-OT1A0A1B0GTJ5 212 aa9.58□□□□□ -0.88
PCAT1-202ENST00000561978 RBFOX3A6NFN3 312 aa9.58□□□□□ -0.88
PCAT1-202ENST00000561978 LINC00473A8K010 186 aa9.58□□□□□ -0.88
PCAT1-202ENST00000561978 RBMXL2O75526 392 aaKnown RBP9.58□□□□□ -0.88
PCAT1-202ENST00000561978 LOXP28300 417 aaPredicted RBP9.58□□□□□ -0.88
PCAT1-202ENST00000561978 NPBWR1P48145 328 aa9.58□□□□□ -0.88
PCAT1-202ENST00000561978 RUNX1Q01196 453 aa9.58□□□□□ -0.88
PCAT1-202ENST00000561978 TEX36Q5VZQ5 186 aa9.58□□□□□ -0.88
PCAT1-202ENST00000561978 EGLN1Q9GZT9 426 aa9.58□□□□□ -0.88
PCAT1-202ENST00000561978 CLN8Q9UBY8 286 aa9.58□□□□□ -0.88
PCAT1-202ENST00000561978 FBXO7Q9Y3I1 522 aa9.58□□□□□ -0.88
PCAT1-202ENST00000561978 B9A039 149 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 PPIHO43447 177 aaKnown RBP9.57□□□□□ -0.88
PCAT1-202ENST00000561978 WIPF1O43516 503 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 OR4A8P0C604 315 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 NDUFB7P17568 137 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 SLC38A11Q08AI6 406 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 NCMAPQ5T1S8 102 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 CYB5R2Q6BCY4 276 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 SPSB3Q6PJ21 355 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 ZNF788Q6ZQV5 615 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 SFT2D1Q8WV19 159 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 CORO2AQ92828 525 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 R3HDM4Q96D70 268 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 S1PR3Q99500 378 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 C2orf88Q9BSF0 95 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 SPXQ9BT56 116 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 WDR61Q9GZS3 305 aaKnown RBP9.57□□□□□ -0.88
PCAT1-202ENST00000561978 GFOD1Q9NXC2 390 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 RNF24Q9Y225 148 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 TIMM9Q9Y5J7 89 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 PUS1Q9Y606 427 aaKnown RBP eCLIP9.57□□□□□ -0.88
PCAT1-202ENST00000561978 C17orf100A8MU93 164 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 H7C2Y5 167 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 M0R1X1 148 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 FCGR3BO75015 233 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 CYB5R3P00387 301 aaPredicted RBP9.57□□□□□ -0.88
PCAT1-202ENST00000561978 HNF1AP20823 631 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 ERVK-16P61578 105 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 ARL16Q0P5N6 197 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 ADIPOQQ15848 244 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 NCR3LG1Q68D85 454 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 TMEM88Q6PEY1 159 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 C1orf87Q8N0U7 546 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 OR10P1Q8NGE3 313 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 NEUROG1Q92886 237 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 CLUHP3Q96NS8 147 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 GAFA1Q96PS6 74 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 CLCC1Q96S66 551 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 ABHD14AQ9BUJ0 271 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 LINC00574Q9H8X3 128 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 SMCO4Q9NRQ5 59 aa9.57□□□□□ -0.88
PCAT1-202ENST00000561978 TRAV38-1A0A0B4J264 116 aa9.56□□□□□ -0.88
PCAT1-202ENST00000561978 NKX6-3A6NJ46 265 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms