RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 ZNF124Q15973 351 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 OR2B11Q5JQS5 317 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 AVPI1Q5T686 147 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 WDR25Q64LD2 544 aaPredicted RBP5.32□□□□□ -1.56
CAPN3-210ENST00000561817 ALKAL2Q6UX46 152 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 ZNF833PQ6ZTB9 187 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 FOXRED2Q8IWF2 684 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 ZNF383Q8NA42 475 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 TMEM116Q8NCL8 245 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 CD300LFQ8TDQ1 290 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 TCTEX1D2Q8WW35 142 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 PHYHIPLQ96FC7 376 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 TPPP3Q9BW30 176 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 MAGT1Q9H0U3 335 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 GAL3ST2Q9H3Q3 398 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 UBTD1Q9HAC8 227 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 LYRM2Q9NU23 88 aaPredicted RBP5.32□□□□□ -1.56
CAPN3-210ENST00000561817 FBXL17Q9UF56 701 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 COL12A1Q99715 3063 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 A0A087WWL8 130 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 FAM24AA6NFZ4 105 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 LEUTXA8MZ59 168 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 C22orf46C9J442 243 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 FAM90A26D6RGX4 464 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 F8WDY8 70 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 TOR1AO14656 332 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 TAAR5O14804 337 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 FGF16O43320 207 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 CHST1O43916 411 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 SSSCA1O60232 199 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 SPDEFO95238 335 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 RBP4P02753 201 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 FAM157CP0CG43 387 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 IGHV1-8P0DP01 117 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 NFYBP25208 207 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 G6PCP35575 357 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 CDKN1AP38936 164 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 KIR2DS2P43631 304 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 THBS3P49746 956 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 MFAP4P55083 255 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 RPL11P62913 178 aaKnown RBP5.31□□□□□ -1.56
CAPN3-210ENST00000561817 EWSR1Q01844 656 aaKnown RBP eCLIP5.31□□□□□ -1.56
CAPN3-210ENST00000561817 NHLH2Q02577 135 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 COTL1Q14019 142 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 POU2AF1Q16633 256 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 PDLIM3Q53GG5 364 aaPredicted RBP5.31□□□□□ -1.56
CAPN3-210ENST00000561817 RPL7L1Q6DKI1 246 aaKnown RBP5.31□□□□□ -1.56
CAPN3-210ENST00000561817 THOC7Q6I9Y2 204 aaKnown RBP5.31□□□□□ -1.56
CAPN3-210ENST00000561817 CLEC9AQ6UXN8 241 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 ZNF600Q6ZNG1 722 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 HAPLN4Q86UW8 402 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 BAP18Q8IXM2 172 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 TMEM252Q8N6L7 170 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 PCNPQ8WW12 178 aaKnown RBP5.31□□□□□ -1.56
CAPN3-210ENST00000561817 H1FXQ92522 213 aaKnown RBP5.31□□□□□ -1.56
CAPN3-210ENST00000561817 ZNF471Q9BX82 626 aaPredicted RBP5.31□□□□□ -1.56
CAPN3-210ENST00000561817 REG4Q9BYZ8 158 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 PATZ1Q9HBE1 687 aaKnown RBP5.31□□□□□ -1.56
CAPN3-210ENST00000561817 BARX1Q9HBU1 254 aaPredicted RBP5.31□□□□□ -1.56
CAPN3-210ENST00000561817 MED9Q9NWA0 146 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 HSPB7Q9UBY9 170 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 MIOXQ9UGB7 285 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 LAMP3Q9UQV4 416 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 HECTD1Q9ULT8 2610 aa5.31□□□□□ -1.56
CAPN3-210ENST00000561817 USP9YO00507 2555 aaPredicted RBP5.3□□□□□ -1.56
CAPN3-210ENST00000561817 SH2D7A6NKC9 451 aaPredicted RBP5.3□□□□□ -1.56
CAPN3-210ENST00000561817 MARCH11A6NNE9 402 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 J3QR06 171 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 PPIHO43447 177 aaKnown RBP5.3□□□□□ -1.56
CAPN3-210ENST00000561817 SYNGR2O43760 224 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 FCGR3BO75015 233 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 HPRT1P00492 218 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 KRASP01116 189 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 IGLV1-47P01700 117 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 OR9G9P0C7N8 305 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 NUP62P37198 522 aaPredicted RBP5.3□□□□□ -1.56
CAPN3-210ENST00000561817 GNG10P50151 68 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 ARHGDIBP52566 201 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 EFNA4P52798 201 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 AKR1C2P52895 323 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 TAS2R30P59541 319 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 PAX2Q02962 417 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 TNFRSF9Q07011 255 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 ARL16Q0P5N6 197 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 FAM74A1Q5RGS3 127 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 FAM71F2Q6NXP2 309 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 LYG1Q8N1E2 194 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 STPG2Q8N412 459 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 Q8N7P7 452 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 UBAC2Q8NBM4 344 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 OR5AN1Q8NGI8 311 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 NRGNQ92686 78 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 RAB1CQ92928 201 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 R3HDM4Q96D70 268 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 RBMXL1Q96E39 390 aaKnown RBP5.3□□□□□ -1.56
CAPN3-210ENST00000561817 ADTRPQ96IZ2 230 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 SMIM8Q96KF7 97 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 CXorf58Q96LI9 332 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 RAB40CQ96S21 281 aa5.3□□□□□ -1.56
CAPN3-210ENST00000561817 GINS3Q9BRX5 216 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms