RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 C9orf135Q5VTT2 229 aa15.65■□□□□ 0.1
RAB40C-206ENST00000561781 WDR82Q6UXN9 313 aa15.65■□□□□ 0.1
RAB40C-206ENST00000561781 AP1S3Q96PC3 154 aa15.65■□□□□ 0.1
RAB40C-206ENST00000561781 SSBP4Q9BWG4 385 aaPredicted RBP15.65■□□□□ 0.1
RAB40C-206ENST00000561781 HES4Q9HCC6 221 aa15.65■□□□□ 0.1
RAB40C-206ENST00000561781 NPVFQ9HCQ7 196 aa15.65■□□□□ 0.1
RAB40C-206ENST00000561781 NCOA6Q14686 2063 aaPredicted RBP15.65■□□□□ 0.1
RAB40C-206ENST00000561781 HLA-DQA1P01909 254 aa15.65■□□□□ 0.1
RAB40C-206ENST00000561781 SERPINE2P07093 398 aa15.65■□□□□ 0.1
RAB40C-206ENST00000561781 OR10J4P0C629 311 aa15.65■□□□□ 0.1
RAB40C-206ENST00000561781 F2RP25116 425 aa15.65■□□□□ 0.1
RAB40C-206ENST00000561781 HIST1H1AQ02539 215 aaPredicted RBP15.65■□□□□ 0.1
RAB40C-206ENST00000561781 TRIP6Q15654 476 aaKnown RBP15.65■□□□□ 0.1
RAB40C-206ENST00000561781 OSR2Q8N2R0 312 aa15.65■□□□□ 0.1
RAB40C-206ENST00000561781 ST6GALNAC6Q969X2 333 aa15.65■□□□□ 0.1
RAB40C-206ENST00000561781 ZNF442Q9H7R0 627 aa15.65■□□□□ 0.1
RAB40C-206ENST00000561781 CACNG5Q9UF02 275 aa15.65■□□□□ 0.1
RAB40C-206ENST00000561781 UNC13CQ8NB66 2214 aa15.64■□□□□ 0.09
RAB40C-206ENST00000561781 IGKV1-12A0A0C4DH73 117 aa15.64■□□□□ 0.09
RAB40C-206ENST00000561781 SPAARA0A1B0GVQ0 90 aa15.64■□□□□ 0.09
RAB40C-206ENST00000561781 IGKV1D-12P01611 117 aa15.64■□□□□ 0.09
RAB40C-206ENST00000561781 CX3CL1P78423 397 aa15.64■□□□□ 0.09
RAB40C-206ENST00000561781 SMAGPQ0VAQ4 97 aa15.64■□□□□ 0.09
RAB40C-206ENST00000561781 EBLN2Q6P2I7 272 aa15.64■□□□□ 0.09
RAB40C-206ENST00000561781 OR8I2Q8N0Y5 310 aa15.64■□□□□ 0.09
RAB40C-206ENST00000561781 FAM222BQ8WU58 562 aa15.64■□□□□ 0.09
RAB40C-206ENST00000561781 LSM10Q969L4 123 aaKnown RBP15.64■□□□□ 0.09
RAB40C-206ENST00000561781 CCL28Q9NRJ3 127 aa15.64■□□□□ 0.09
RAB40C-206ENST00000561781 TRAV26-1A0A087WT03 109 aa15.64■□□□□ 0.09
RAB40C-206ENST00000561781 FAM231BA6NCW3 169 aa15.64■□□□□ 0.09
RAB40C-206ENST00000561781 TMEM150CB9EJG8 249 aa15.64■□□□□ 0.09
RAB40C-206ENST00000561781 BMPR1BO00238 502 aa15.64■□□□□ 0.09
RAB40C-206ENST00000561781 PDCD6O75340 191 aa15.64■□□□□ 0.09
RAB40C-206ENST00000561781 HSBP1O75506 76 aa15.64■□□□□ 0.09
RAB40C-206ENST00000561781 PGLYRP1O75594 196 aaPredicted RBP15.64■□□□□ 0.09
RAB40C-206ENST00000561781 GATA2P23769 480 aaPredicted RBP15.64■□□□□ 0.09
RAB40C-206ENST00000561781 FOXL2P58012 376 aa15.64■□□□□ 0.09
RAB40C-206ENST00000561781 Q6ZRM9 215 aa15.64■□□□□ 0.09
RAB40C-206ENST00000561781 RDH5Q92781 318 aa15.64■□□□□ 0.09
RAB40C-206ENST00000561781 TMEM147Q9BVK8 224 aa15.64■□□□□ 0.09
RAB40C-206ENST00000561781 GTSF1LQ9H1H1 148 aa15.64■□□□□ 0.09
RAB40C-206ENST00000561781 CEACAM3P40198 252 aa15.63■□□□□ 0.09
RAB40C-206ENST00000561781 REG1BP48304 166 aa15.63■□□□□ 0.09
RAB40C-206ENST00000561781 PRSS12P56730 875 aa15.63■□□□□ 0.09
RAB40C-206ENST00000561781 PLP1P60201 277 aa15.63■□□□□ 0.09
RAB40C-206ENST00000561781 CKS1BP61024 79 aa15.63■□□□□ 0.09
RAB40C-206ENST00000561781 SEC11AP67812 179 aa15.63■□□□□ 0.09
RAB40C-206ENST00000561781 Q6ZS49 121 aa15.63■□□□□ 0.09
RAB40C-206ENST00000561781 ST8SIA1Q92185 356 aa15.63■□□□□ 0.09
RAB40C-206ENST00000561781 AKAP13Q12802 2813 aa15.63■□□□□ 0.09
RAB40C-206ENST00000561781 ZNF816-ZNF321PA0A0X1KG74 233 aa15.63■□□□□ 0.09
RAB40C-206ENST00000561781 K7EP34 96 aa15.63■□□□□ 0.09
RAB40C-206ENST00000561781 M0R2Z0 102 aa15.63■□□□□ 0.09
RAB40C-206ENST00000561781 CRYBB3P26998 211 aa15.63■□□□□ 0.09
RAB40C-206ENST00000561781 RSPO1Q2MKA7 263 aaPredicted RBP15.63■□□□□ 0.09
RAB40C-206ENST00000561781 LY96Q9Y6Y9 160 aa15.63■□□□□ 0.09
RAB40C-206ENST00000561781 ZNF883P0CG24 379 aa15.62■□□□□ 0.09
RAB40C-206ENST00000561781 PSG7Q13046 419 aa15.62■□□□□ 0.09
RAB40C-206ENST00000561781 TMEM14EPQ6UXP3 125 aa15.62■□□□□ 0.09
RAB40C-206ENST00000561781 Q6ZSR3 168 aa15.62■□□□□ 0.09
RAB40C-206ENST00000561781 DUSP23Q9BVJ7 150 aa15.62■□□□□ 0.09
RAB40C-206ENST00000561781 OR4C46A6NHA9 309 aa15.62■□□□□ 0.09
RAB40C-206ENST00000561781 C2orf70A6NJV1 201 aa15.62■□□□□ 0.09
RAB40C-206ENST00000561781 SSTR5P35346 364 aa15.62■□□□□ 0.09
RAB40C-206ENST00000561781 C17orf82Q86X59 251 aaPredicted RBP15.62■□□□□ 0.09
RAB40C-206ENST00000561781 OR2AE1Q8NHA4 323 aa15.62■□□□□ 0.09
RAB40C-206ENST00000561781 RAB1CQ92928 201 aa15.62■□□□□ 0.09
RAB40C-206ENST00000561781 OR2V2Q96R30 315 aa15.62■□□□□ 0.09
RAB40C-206ENST00000561781 FNDC4Q9H6D8 234 aaPredicted RBP15.62■□□□□ 0.09
RAB40C-206ENST00000561781 EFNA2O43921 213 aa15.61■□□□□ 0.09
RAB40C-206ENST00000561781 TMEM70Q9BUB7 260 aa15.61■□□□□ 0.09
RAB40C-206ENST00000561781 KIR2DS5A0A0G2JLQ3 304 aa15.6■□□□□ 0.09
RAB40C-206ENST00000561781 A0A0G2JNG1 304 aa15.6■□□□□ 0.09
RAB40C-206ENST00000561781 KIR2DS3K7RE56 304 aa15.6■□□□□ 0.09
RAB40C-206ENST00000561781 TUSC2O75896 110 aa15.6■□□□□ 0.09
RAB40C-206ENST00000561781 AMY1AP04745 511 aa15.6■□□□□ 0.09
RAB40C-206ENST00000561781 SCTP09683 121 aa15.6■□□□□ 0.09
RAB40C-206ENST00000561781 KIR2DS5Q14953 304 aa15.6■□□□□ 0.09
RAB40C-206ENST00000561781 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.6■□□□□ 0.09
RAB40C-206ENST00000561781 PLCXD3Q63HM9 321 aa15.6■□□□□ 0.09
RAB40C-206ENST00000561781 C1RLQ9NZP8 487 aa15.6■□□□□ 0.09
RAB40C-206ENST00000561781 TP73-AS1Q9UF72 201 aa15.6■□□□□ 0.09
RAB40C-206ENST00000561781 ARL2-SNX15V9GYD0 113 aa15.6■□□□□ 0.09
RAB40C-206ENST00000561781 V9GYV3 84 aa15.6■□□□□ 0.09
RAB40C-206ENST00000561781 K7EN84 100 aa15.6■□□□□ 0.09
RAB40C-206ENST00000561781 OR7C1O76099 320 aaPredicted RBP15.6■□□□□ 0.09
RAB40C-206ENST00000561781 FASLGP48023 281 aa15.6■□□□□ 0.09
RAB40C-206ENST00000561781 GFERP55789 205 aa15.6■□□□□ 0.09
RAB40C-206ENST00000561781 CFHR1Q03591 330 aa15.6■□□□□ 0.09
RAB40C-206ENST00000561781 ZDHHC23Q8IYP9 409 aa15.6■□□□□ 0.09
RAB40C-206ENST00000561781 OR5A1Q8NGJ0 315 aa15.6■□□□□ 0.09
RAB40C-206ENST00000561781 C18orf32Q8TCD1 76 aa15.6■□□□□ 0.09
RAB40C-206ENST00000561781 BORCS8Q96FH0 119 aa15.6■□□□□ 0.09
RAB40C-206ENST00000561781 NPCDR1Q9BY65 106 aa15.6■□□□□ 0.09
RAB40C-206ENST00000561781 A0A1W2PQM1 296 aa15.59■□□□□ 0.09
RAB40C-206ENST00000561781 C9orf118A6NHY6 69 aa15.59■□□□□ 0.09
RAB40C-206ENST00000561781 M0R135 149 aa15.59■□□□□ 0.09
RAB40C-206ENST00000561781 PTGDSP41222 190 aa15.59■□□□□ 0.09
RAB40C-206ENST00000561781 TNXAQ16473 311 aa15.59■□□□□ 0.09
RAB40C-206ENST00000561781 SRSF7Q16629 238 aaKnown RBP eCLIP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms