RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 OR8S1Q8NH09 359 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 ANGPTL6Q8NI99 470 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 GIMAP1Q8WWP7 306 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 DUS3LQ96G46 650 aaKnown RBP2.4□□□□□ -2.03
HERC1-215ENST00000561436 OR5B12Q96R08 314 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 CGREF1Q99674 301 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 PITX2Q99697 317 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 SIKE1Q9BRV8 207 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 ADAT1Q9BUB4 502 aaKnown RBP2.4□□□□□ -2.03
HERC1-215ENST00000561436 RTL8AQ9BWD3 113 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 CHID1Q9BWS9 393 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 SLC25A2Q9BXI2 301 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 PTTG3PQ9NZH4 202 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 KLK12Q9UKR0 248 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 POLR1DQ9Y2S0 133 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 F11RQ9Y624 299 aaKnown RBP2.4□□□□□ -2.03
HERC1-215ENST00000561436 DSCAMO60469 2012 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 MAP1AP78559 2803 aaPredicted RBP2.39□□□□□ -2.03
HERC1-215ENST00000561436 IGLV1-36A0A0B4J1U3 117 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 TRBV9A0A0B4J1U6 114 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 IGHV3-74A0A0B4J1X5 117 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 PLAC8L1A1L4L8 177 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 SMIM23A6NLE4 172 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 OR2AT4A6NND4 320 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 BBIP1A8MTZ0 92 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 C17orf98A8MV24 154 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 ODF3BA8MYP8 253 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 F5H5K5 113 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 KPNA4O00629 521 aaPredicted RBP2.39□□□□□ -2.03
HERC1-215ENST00000561436 MED6O75586 246 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 OR2F2O95006 317 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 GABARAPO95166 117 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 TSPAN13O95857 204 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 IGLV2-23P01705 113 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 IGHV1-8P0DP01 117 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 ANXA8P13928 327 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 CTLA4P16410 223 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 ZNF823P16415 610 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 KDELR2P33947 212 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 CEACAM3P40198 252 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 CEACAM6P40199 344 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 ERFP50548 548 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 GZMMP51124 257 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 RAB9AP51151 201 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 RPL31P62899 125 aaKnown RBP2.39□□□□□ -2.03
HERC1-215ENST00000561436 SLC35B1P78383 322 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 LIPEQ05469 1076 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 KRR1Q13601 381 aaKnown RBP2.39□□□□□ -2.03
HERC1-215ENST00000561436 KIR2DS1Q14954 304 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 MESTQ5EB52 335 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 FAM201AQ5SY85 155 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 WDR82Q6UXN9 313 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 Q6ZSR3 168 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 ARPINQ7Z6K5 226 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 FUNDC1Q8IVP5 155 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 NKAIN4Q8IVV8 208 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 LINC00471Q8N535 108 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 FAM86B1Q8N7N1 296 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 OR5A2Q8NGI9 324 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 OR2T4Q8NH00 348 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 OR8U1Q8NH10 309 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 PFN4Q8NHR9 129 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 ZNF596Q8TC21 504 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 LRRC29Q8WV35 223 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 SRSF12Q8WXF0 261 aaKnown RBP2.39□□□□□ -2.03
HERC1-215ENST00000561436 TAMM41Q96BW9 452 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 SEH1LQ96EE3 360 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 PPP1R36Q96LQ0 422 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 CCL13Q99616 98 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 WFDC6Q9BQY6 131 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 SYT4Q9H2B2 425 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 VCXQ9H320 206 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 OR51M1Q9H341 326 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 GEMIN7Q9H840 131 aaKnown RBP2.39□□□□□ -2.03
HERC1-215ENST00000561436 SIRT7Q9NRC8 400 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 MRPL22Q9NWU5 206 aaKnown RBP2.39□□□□□ -2.03
HERC1-215ENST00000561436 NKIRAS1Q9NYS0 192 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 ENPP5Q9UJA9 477 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 SIGLEC7Q9Y286 467 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 SIGLEC9Q9Y336 463 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 LHFPL6Q9Y693 200 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 CCDC88CQ9P219 2028 aa2.39□□□□□ -2.03
HERC1-215ENST00000561436 HEATR5BQ9P2D3 2071 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 A0A096LNJ9 63 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 hADV38S2A0JD32 116 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 FUOMA2VDF0 154 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 ZNF878C9JN71 531 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 C11orf94C9JXX5 98 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 CCRL2O00421 344 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 CXCR6O00574 342 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 CDIPTO14735 213 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 NUPL2O15504 423 aaKnown RBP2.38□□□□□ -2.03
HERC1-215ENST00000561436 FGF16O43320 207 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 CHST1O43916 411 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 FCN3O75636 299 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 ZNF728P0DKX0 622 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 HTR1DP28221 377 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 MAS1LP35410 378 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 OMPP47874 163 aa2.38□□□□□ -2.03
HERC1-215ENST00000561436 ESRRGP62508 458 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms