RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 FGFRL1Q8N441 504 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 CLDND2Q8NHS1 167 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 RNF141Q8WVD5 230 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 NUDCD2Q8WVJ2 157 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 PTX4Q96A99 478 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 SDSLQ96GA7 329 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 C20orf144Q9BQM9 153 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 POLR3KQ9Y2Y1 108 aaPredicted RBP9.64□□□□□ -0.87
HERC1-214ENST00000561400 ETV7Q9Y603 341 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 CREBBPQ92793 2442 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 KIAA2026Q5HYC2 2103 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 SIRPB1O00241 398 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 SH2D1BO14796 132 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 SOCS1O15524 211 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 PSPNO60542 156 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 FBXO24O75426 580 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 WNT2P09544 360 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 OR5G3P0C626 314 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 SLC25A16P16260 332 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 ZBTB25P24278 435 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 LMO1P25800 156 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 NPY4RP50391 375 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 LMO4P61968 165 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 RHOGP84095 191 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 OR4A47Q6IF82 309 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 RTN4RL2Q86UN3 420 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 GPR146Q96CH1 333 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 ZNF665Q9H7R5 613 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 KAAG1Q9UBP8 84 aa9.64□□□□□ -0.87
HERC1-214ENST00000561400 TRAV24A0A0B4J272 114 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 UBE2QL1A1L167 161 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 DEGS1O15121 323 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 ZNF737O75373 536 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 OR2F2O95006 317 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 TRGC1P0CF51 173 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 ELK1P19419 428 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 TMEM50BP56557 158 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 CKS1BP61024 79 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 OR2F1Q13607 317 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 MPV17LQ2QL34 196 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 ZNF841Q6ZN19 808 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 CMTM4Q8IZR5 234 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 ZNF471Q9BX82 626 aaPredicted RBP9.63□□□□□ -0.87
HERC1-214ENST00000561400 ATG5Q9H1Y0 275 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 PATZ1Q9HBE1 687 aaKnown RBP9.63□□□□□ -0.87
HERC1-214ENST00000561400 PLEKHJ1Q9NW61 149 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 RFNGQ9Y644 331 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 FOXI3A8MTJ6 420 aaPredicted RBP9.63□□□□□ -0.87
HERC1-214ENST00000561400 RNF223E7ERA6 249 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 RAB27BO00194 218 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 SLC33A1O00400 549 aaPredicted RBP9.63□□□□□ -0.87
HERC1-214ENST00000561400 OR2C1O95371 312 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 IL5P05113 134 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 CHRM2P08172 466 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 IL13RA1P78552 427 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 SSBP2P81877 361 aaPredicted RBP9.63□□□□□ -0.87
HERC1-214ENST00000561400 SLC36A1Q7Z2H8 476 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 LINC00596Q86U02 117 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 CHST6Q9GZX3 395 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 OR6C3Q9NZP0 311 aa9.63□□□□□ -0.87
HERC1-214ENST00000561400 WNK2Q9Y3S1 2297 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 FAM90A10PA6NDY2 464 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 FAM90A18PA6NE21 464 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 FAM90A16PA6NEW6 464 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 FAM90A20PA6NIJ5 464 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 FAM90A8PA6NJQ4 464 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 FAM90A7PA6NKC0 464 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 FAM90A22PA8MWA6 464 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 FAM90A12PA8MX19 464 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 FAM90A5PA8MXJ8 464 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 FAM90A23PA8MXZ1 464 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 HSPB6O14558 160 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 SIVA1O15304 175 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 EIF4EP06730 217 aaKnown RBP9.62□□□□□ -0.87
HERC1-214ENST00000561400 FAM90A15PP0C7V4 464 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 FAM90A13PP0C7W8 464 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 FAM90A14PP0C7W9 464 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 FAM90A24PP0C7X0 464 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 OR13C7P0DN81 318 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 USF1P22415 310 aaPredicted RBP9.62□□□□□ -0.87
HERC1-214ENST00000561400 BLVRBP30043 206 aaPredicted RBP9.62□□□□□ -0.87
HERC1-214ENST00000561400 UCP3P55916 312 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 H2BFSP57053 126 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 ACOT7LQ6ZUV0 252 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 MAPK1IP1LQ8NDC0 245 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 NEIL1Q96FI4 390 aaPredicted RBP9.62□□□□□ -0.87
HERC1-214ENST00000561400 ACANP16112 2415 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 TRAV34A0A0B4J273 112 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 K7N7A8 449 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 TSPAN15O95858 294 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 SCGB1D1O95968 90 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 CD74P04233 296 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 CHATP28329 748 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 ELLP55199 621 aaPredicted RBP9.62□□□□□ -0.87
HERC1-214ENST00000561400 PAX2Q02962 417 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 PRSS8Q16651 343 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 UBE2NLQ5JXB2 153 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 TMEM268Q5VZI3 342 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 C6orf201Q7Z4U5 140 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 ZNF546Q86UE3 836 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms