RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 DNAH1Q9P2D7 4330 aa8.79□□□□□ -1
USP3-220ENST00000561381 CSMD3Q7Z407 3707 aa8.78□□□□□ -1
USP3-220ENST00000561381 RBMY1BA6NDE4 496 aaKnown RBP8.78□□□□□ -1
USP3-220ENST00000561381 RBMY1EA6NEQ0 496 aaKnown RBP8.78□□□□□ -1
USP3-220ENST00000561381 SSX5O60225 188 aa8.78□□□□□ -1
USP3-220ENST00000561381 OR2C1O95371 312 aa8.78□□□□□ -1
USP3-220ENST00000561381 IGHV3-23P01764 117 aa8.78□□□□□ -1
USP3-220ENST00000561381 IL6RP08887 468 aaPredicted RBP8.78□□□□□ -1
USP3-220ENST00000561381 RBMY1DP0C7P1 496 aaKnown RBP8.78□□□□□ -1
USP3-220ENST00000561381 EIF4EBP1Q13541 118 aaPredicted RBP8.78□□□□□ -1
USP3-220ENST00000561381 DEFB114Q30KQ6 69 aa8.78□□□□□ -1
USP3-220ENST00000561381 DEFB125Q8N687 156 aa8.78□□□□□ -1
USP3-220ENST00000561381 NECAP1Q8NC96 275 aa8.78□□□□□ -1
USP3-220ENST00000561381 OR2K2Q8NGT1 345 aa8.78□□□□□ -1
USP3-220ENST00000561381 NEURL2Q9BR09 285 aa8.78□□□□□ -1
USP3-220ENST00000561381 CENPOQ9BU64 300 aa8.78□□□□□ -1
USP3-220ENST00000561381 OR51E2Q9H255 320 aa8.78□□□□□ -1
USP3-220ENST00000561381 SPATA2Q9UM82 520 aa8.78□□□□□ -1
USP3-220ENST00000561381 PRELID3BQ9Y3B1 194 aa8.78□□□□□ -1
USP3-220ENST00000561381 CEPT1Q9Y6K0 416 aa8.78□□□□□ -1
USP3-220ENST00000561381 S4R3C0 116 aa8.78□□□□□ -1
USP3-220ENST00000561381 HYDINQ4G0P3 5121 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 C2orf70A6NJV1 201 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 NOTOA8MTQ0 251 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 AIREO43918 545 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 CREBL2O60519 120 aaPredicted RBP8.77□□□□□ -1.01
USP3-220ENST00000561381 KBTBD11O94819 623 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 NDUFB8O95169 186 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 IFNA6P05013 189 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 CTXN2P0C2S0 81 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 PTHLHP12272 177 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 MYOD1P15172 320 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 AREGP15514 252 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 CD36P16671 472 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 GALP22466 123 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 CNIH2Q6PI25 160 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 PUSL1Q8N0Z8 303 aaKnown RBP8.77□□□□□ -1.01
USP3-220ENST00000561381 DYNLRB2Q8TF09 96 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 TCTEX1D2Q8WW35 142 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 CACNG8Q8WXS5 425 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 CCDC140Q96MF4 163 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 FANCD2OSQ96PS1 177 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 FYTTD1Q96QD9 318 aaKnown RBP8.77□□□□□ -1.01
USP3-220ENST00000561381 OR2A7Q96R45 310 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 DCSTAMPQ9H295 470 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 TXNL4BQ9NX01 149 aaKnown RBP8.77□□□□□ -1.01
USP3-220ENST00000561381 TAS2R8Q9NYW2 309 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 DAPK2Q9UIK4 370 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 FBXL7Q9UJT9 491 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 BLOC1S6Q9UL45 172 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 ZNF257Q9Y2Q1 563 aa8.77□□□□□ -1.01
USP3-220ENST00000561381 MRPS7Q9Y2R9 242 aaKnown RBP8.77□□□□□ -1.01
USP3-220ENST00000561381 TPPPO94811 219 aa8.76□□□□□ -1.01
USP3-220ENST00000561381 FOLR2P14207 255 aa8.76□□□□□ -1.01
USP3-220ENST00000561381 PSMB9P28065 219 aa8.76□□□□□ -1.01
USP3-220ENST00000561381 KIR2DS2P43631 304 aa8.76□□□□□ -1.01
USP3-220ENST00000561381 RPL27AP46776 148 aaKnown RBP8.76□□□□□ -1.01
USP3-220ENST00000561381 HSPA13P48723 471 aa8.76□□□□□ -1.01
USP3-220ENST00000561381 GNG2P59768 71 aa8.76□□□□□ -1.01
USP3-220ENST00000561381 ARL6IP1Q15041 203 aa8.76□□□□□ -1.01
USP3-220ENST00000561381 GUCA2BQ16661 112 aa8.76□□□□□ -1.01
USP3-220ENST00000561381 SSX9Q7RTT3 188 aa8.76□□□□□ -1.01
USP3-220ENST00000561381 MFSD4AQ8N468 514 aa8.76□□□□□ -1.01
USP3-220ENST00000561381 OR4S2Q8NH73 311 aa8.76□□□□□ -1.01
USP3-220ENST00000561381 TMEM167AQ8TBQ9 72 aa8.76□□□□□ -1.01
USP3-220ENST00000561381 LGALS14Q8TCE9 139 aa8.76□□□□□ -1.01
USP3-220ENST00000561381 WDR89Q96FK6 387 aaPredicted RBP8.76□□□□□ -1.01
USP3-220ENST00000561381 HSD17B10Q99714 261 aaKnown RBP8.76□□□□□ -1.01
USP3-220ENST00000561381 VCX3BQ9H321 246 aa8.76□□□□□ -1.01
USP3-220ENST00000561381 SRD5A3Q9H8P0 318 aa8.76□□□□□ -1.01
USP3-220ENST00000561381 SLC2A9Q9NRM0 540 aa8.76□□□□□ -1.01
USP3-220ENST00000561381 ANXA10Q9UJ72 324 aa8.76□□□□□ -1.01
USP3-220ENST00000561381 BIRC6Q9NR09 4857 aa8.76□□□□□ -1.01
USP3-220ENST00000561381 LYSTQ99698 3801 aa8.76□□□□□ -1.01
USP3-220ENST00000561381 ERICH4A6NGS2 130 aa8.75□□□□□ -1.01
USP3-220ENST00000561381 CGB1A6NKQ9 187 aa8.75□□□□□ -1.01
USP3-220ENST00000561381 NPIPB5A8MRT5 1133 aa8.75□□□□□ -1.01
USP3-220ENST00000561381 TNFSF12O43508 249 aa8.75□□□□□ -1.01
USP3-220ENST00000561381 GGCTO75223 188 aaKnown RBP8.75□□□□□ -1.01
USP3-220ENST00000561381 SLC22A5O76082 557 aa8.75□□□□□ -1.01
USP3-220ENST00000561381 REG1AP05451 166 aa8.75□□□□□ -1.01
USP3-220ENST00000561381 CLEC2LP0C7M8 214 aa8.75□□□□□ -1.01
USP3-220ENST00000561381 ZNF735P0CB33 412 aa8.75□□□□□ -1.01
USP3-220ENST00000561381 FGF9P31371 208 aaPredicted RBP8.75□□□□□ -1.01
USP3-220ENST00000561381 UBE2UQ5VVX9 321 aa8.75□□□□□ -1.01
USP3-220ENST00000561381 CLEC19AQ6UXS0 136 aa8.75□□□□□ -1.01
USP3-220ENST00000561381 SLC25A42Q86VD7 318 aa8.75□□□□□ -1.01
USP3-220ENST00000561381 LAX1Q8IWV1 398 aa8.75□□□□□ -1.01
USP3-220ENST00000561381 SPARTQ8N0X7 666 aa8.75□□□□□ -1.01
USP3-220ENST00000561381 RNF167Q9H6Y7 350 aa8.75□□□□□ -1.01
USP3-220ENST00000561381 ZC4H2Q9NQZ6 224 aa8.75□□□□□ -1.01
USP3-220ENST00000561381 CCL28Q9NRJ3 127 aa8.75□□□□□ -1.01
USP3-220ENST00000561381 SLC2A8Q9NY64 477 aa8.75□□□□□ -1.01
USP3-220ENST00000561381 RRP15Q9Y3B9 282 aaKnown RBP8.75□□□□□ -1.01
USP3-220ENST00000561381 DPPA5A6NC42 116 aa8.74□□□□□ -1.01
USP3-220ENST00000561381 OR11H12B2RN74 326 aa8.74□□□□□ -1.01
USP3-220ENST00000561381 LGALS9O00182 355 aa8.74□□□□□ -1.01
USP3-220ENST00000561381 FCER2P06734 321 aa8.74□□□□□ -1.01
USP3-220ENST00000561381 CRYGCP07315 174 aa8.74□□□□□ -1.01
USP3-220ENST00000561381 CBLN1P23435 193 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms