RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 TFF1P04155 84 aa13.74□□□□□ -0.21
TPM1-228ENST00000560975 GDF1P27539 372 aa13.74□□□□□ -0.21
TPM1-228ENST00000560975 TSPOP30536 169 aa13.74□□□□□ -0.21
TPM1-228ENST00000560975 NIT1Q86X76 327 aa13.74□□□□□ -0.21
TPM1-228ENST00000560975 PLPPR2Q96GM1 343 aa13.74□□□□□ -0.21
TPM1-228ENST00000560975 GNB1LQ9BYB4 327 aa13.74□□□□□ -0.21
TPM1-228ENST00000560975 COX11Q9Y6N1 276 aa13.74□□□□□ -0.21
TPM1-228ENST00000560975 NBEAQ8NFP9 2946 aa13.74□□□□□ -0.21
TPM1-228ENST00000560975 TRAV9-1A0A075B6T8 112 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 LOC105371242A0A075B767 164 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 J3QT63 122 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 CDIPTO14735 213 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 ZNF324O75467 553 aaPredicted RBP13.73□□□□□ -0.21
TPM1-228ENST00000560975 GCHFRP30047 84 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 ASPHD1Q5U4P2 390 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 TUSC5Q8IXB3 177 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 ZNF738Q8NE65 137 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 GALMQ96C23 342 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 SEPSECSQ9HD40 501 aaKnown RBP13.73□□□□□ -0.21
TPM1-228ENST00000560975 RNF24Q9Y225 148 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 C12orf77C9JDV5 145 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 OR9G9P0C7N8 305 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 LTBRP36941 435 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 GGTLC1Q9BX51 225 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 FAM234AQ9H0X4 552 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 MPC1Q9Y5U8 109 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 PRRX1P54821 245 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 LTC4SQ16873 150 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 TMEM136Q6ZRR5 245 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 WDR86Q86TI4 376 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 TCTEX1D1Q8N7M0 179 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 OR4C5Q8NGB2 326 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 BORCS7Q96B45 105 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 POM121L2Q96KW2 1035 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 HEYLQ9NQ87 328 aaPredicted RBP13.73□□□□□ -0.21
TPM1-228ENST00000560975 MBNL3Q9NUK0 354 aaKnown RBP13.73□□□□□ -0.21
TPM1-228ENST00000560975 BET1LQ9NYM9 111 aa13.73□□□□□ -0.21
TPM1-228ENST00000560975 LOC102723996A0A087X1L8 192 aa13.72□□□□□ -0.21
TPM1-228ENST00000560975 CA2P00918 260 aa13.72□□□□□ -0.21
TPM1-228ENST00000560975 OPRK1P41145 380 aa13.72□□□□□ -0.21
TPM1-228ENST00000560975 AESQ08117 197 aa13.72□□□□□ -0.21
TPM1-228ENST00000560975 TMEM249Q2WGJ8 235 aa13.72□□□□□ -0.21
TPM1-228ENST00000560975 KMT2EQ8IZD2 1858 aa13.72□□□□□ -0.21
TPM1-228ENST00000560975 KLHDC1Q8N7A1 406 aa13.72□□□□□ -0.21
TPM1-228ENST00000560975 SCCPDHQ8NBX0 429 aa13.72□□□□□ -0.21
TPM1-228ENST00000560975 RFESDQ8TAC1 157 aa13.72□□□□□ -0.21
TPM1-228ENST00000560975 NINJ1Q92982 152 aa13.72□□□□□ -0.21
TPM1-228ENST00000560975 DOCK10Q96BY6 2186 aa13.72□□□□□ -0.21
TPM1-228ENST00000560975 ITGB1BP1O14713 200 aa13.72□□□□□ -0.21
TPM1-228ENST00000560975 ACTL6BO94805 426 aa13.72□□□□□ -0.21
TPM1-228ENST00000560975 OTX2P32243 289 aa13.72□□□□□ -0.21
TPM1-228ENST00000560975 CENPWQ5EE01 88 aa13.72□□□□□ -0.21
TPM1-228ENST00000560975 DCAF12Q5T6F0 453 aa13.72□□□□□ -0.21
TPM1-228ENST00000560975 PQLC2Q6ZP29 291 aa13.72□□□□□ -0.21
TPM1-228ENST00000560975 VKORC1L1Q8N0U8 176 aa13.72□□□□□ -0.21
TPM1-228ENST00000560975 ABHD12Q8N2K0 398 aa13.72□□□□□ -0.21
TPM1-228ENST00000560975 TPRX1Q8N7U7 411 aa13.72□□□□□ -0.21
TPM1-228ENST00000560975 TXNDC17Q9BRA2 123 aa13.72□□□□□ -0.21
TPM1-228ENST00000560975 PSPNO60542 156 aa13.71□□□□□ -0.21
TPM1-228ENST00000560975 CGAP01215 116 aa13.71□□□□□ -0.21
TPM1-228ENST00000560975 HBZP02008 142 aa13.71□□□□□ -0.21
TPM1-228ENST00000560975 CDKN1BP46527 198 aa13.71□□□□□ -0.21
TPM1-228ENST00000560975 PLP2Q04941 152 aa13.71□□□□□ -0.21
TPM1-228ENST00000560975 FBLN7Q53RD9 439 aa13.71□□□□□ -0.21
TPM1-228ENST00000560975 FBXO46Q6PJ61 603 aaPredicted RBP13.71□□□□□ -0.21
TPM1-228ENST00000560975 OR4P4Q8NGL7 312 aa13.71□□□□□ -0.21
TPM1-228ENST00000560975 MRGPRDQ8TDS7 321 aa13.71□□□□□ -0.21
TPM1-228ENST00000560975 TSKUQ8WUA8 353 aa13.71□□□□□ -0.21
TPM1-228ENST00000560975 PHF7Q9BWX1 381 aaPredicted RBP13.71□□□□□ -0.21
TPM1-228ENST00000560975 CLEC7AQ9BXN2 247 aa13.71□□□□□ -0.21
TPM1-228ENST00000560975 PKIBQ9C010 78 aa13.71□□□□□ -0.21
TPM1-228ENST00000560975 SLC35D1Q9NTN3 355 aa13.71□□□□□ -0.21
TPM1-228ENST00000560975 SERTAD4Q9NUC0 356 aa13.71□□□□□ -0.21
TPM1-228ENST00000560975 TP73-AS1Q9UF72 201 aa13.71□□□□□ -0.21
TPM1-228ENST00000560975 PINLYPA6NC86 204 aa13.71□□□□□ -0.22
TPM1-228ENST00000560975 M0QZ24 198 aa13.71□□□□□ -0.22
TPM1-228ENST00000560975 BMPR1BO00238 502 aa13.71□□□□□ -0.22
TPM1-228ENST00000560975 GRPP07492 148 aa13.71□□□□□ -0.22
TPM1-228ENST00000560975 GNG4P50150 75 aa13.71□□□□□ -0.22
TPM1-228ENST00000560975 STUMQ69YW2 141 aa13.71□□□□□ -0.22
TPM1-228ENST00000560975 CHODLQ9H9P2 273 aa13.71□□□□□ -0.22
TPM1-228ENST00000560975 TRBV9A0A0B4J1U6 114 aa13.7□□□□□ -0.22
TPM1-228ENST00000560975 MT-CO3P00414 261 aa13.7□□□□□ -0.22
TPM1-228ENST00000560975 CRYBB3P26998 211 aa13.7□□□□□ -0.22
TPM1-228ENST00000560975 OR10J3Q5JRS4 329 aa13.7□□□□□ -0.22
TPM1-228ENST00000560975 DNAJC13O75165 2243 aa13.7□□□□□ -0.22
TPM1-228ENST00000560975 TNRC6BQ9UPQ9 1833 aaKnown RBP13.7□□□□□ -0.22
TPM1-228ENST00000560975 SS18L1O75177 396 aaPredicted RBP13.7□□□□□ -0.22
TPM1-228ENST00000560975 CX3CL1P78423 397 aa13.7□□□□□ -0.22
TPM1-228ENST00000560975 EIF4EBP1Q13541 118 aaPredicted RBP13.7□□□□□ -0.22
TPM1-228ENST00000560975 Q56UQ5 140 aa13.7□□□□□ -0.22
TPM1-228ENST00000560975 ALKBH2Q6NS38 261 aa13.7□□□□□ -0.22
TPM1-228ENST00000560975 ZBTB34Q8NCN2 500 aa13.7□□□□□ -0.22
TPM1-228ENST00000560975 PSG11Q9UQ72 335 aa13.7□□□□□ -0.22
TPM1-228ENST00000560975 COL6A3P12111 3177 aa13.7□□□□□ -0.22
TPM1-228ENST00000560975 FAM166BA8MTA8 275 aa13.69□□□□□ -0.22
TPM1-228ENST00000560975 TOMM40O96008 361 aa13.69□□□□□ -0.22
TPM1-228ENST00000560975 CLDN18P56856 261 aa13.69□□□□□ -0.22
TPM1-228ENST00000560975 RELBQ01201 579 aa13.69□□□□□ -0.22
TPM1-228ENST00000560975 VAMP3Q15836 100 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms