RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 TCF23Q7RTU1 214 aa11.26□□□□□ -0.61
CSPG4P11-201ENST00000560634 Q5BKY6 102 aa11.26□□□□□ -0.61
CSPG4P11-201ENST00000560634 A0A1B0GW15 77 aa11.26□□□□□ -0.61
CSPG4P11-201ENST00000560634 FAM131CQ96AQ9 280 aa11.26□□□□□ -0.61
CSPG4P11-201ENST00000560634 F11RQ9Y624 299 aaKnown RBP11.26□□□□□ -0.61
CSPG4P11-201ENST00000560634 FAM181BA6NEQ2 426 aa11.25□□□□□ -0.61
CSPG4P11-201ENST00000560634 KLF4O43474 513 aa11.25□□□□□ -0.61
CSPG4P11-201ENST00000560634 PRSS53Q2L4Q9 553 aa11.25□□□□□ -0.61
CSPG4P11-201ENST00000560634 KCNS1Q96KK3 526 aa11.25□□□□□ -0.61
CSPG4P11-201ENST00000560634 NBEAP1P0C6P0 100 aa11.25□□□□□ -0.61
CSPG4P11-201ENST00000560634 FHITP49789 147 aa11.25□□□□□ -0.61
CSPG4P11-201ENST00000560634 KLK15Q9H2R5 256 aa11.25□□□□□ -0.61
CSPG4P11-201ENST00000560634 IL36BQ9NZH7 164 aa11.25□□□□□ -0.61
CSPG4P11-201ENST00000560634 CBLN1P23435 193 aa11.25□□□□□ -0.61
CSPG4P11-201ENST00000560634 UCP1P25874 307 aa11.25□□□□□ -0.61
CSPG4P11-201ENST00000560634 ARF6P62330 175 aa11.25□□□□□ -0.61
CSPG4P11-201ENST00000560634 ZNF56Q15929 161 aa11.25□□□□□ -0.61
CSPG4P11-201ENST00000560634 Q6AWC8 147 aa11.25□□□□□ -0.61
CSPG4P11-201ENST00000560634 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.25□□□□□ -0.61
CSPG4P11-201ENST00000560634 OR5P3Q8WZ94 311 aa11.25□□□□□ -0.61
CSPG4P11-201ENST00000560634 TMEM54Q969K7 222 aa11.25□□□□□ -0.61
CSPG4P11-201ENST00000560634 GPHA2Q96T91 129 aa11.25□□□□□ -0.61
CSPG4P11-201ENST00000560634 C1QTNF9BB2RNN3 333 aa11.25□□□□□ -0.61
CSPG4P11-201ENST00000560634 ZIC3O60481 467 aa11.25□□□□□ -0.61
CSPG4P11-201ENST00000560634 FOXL2P58012 376 aa11.25□□□□□ -0.61
CSPG4P11-201ENST00000560634 JKAMPQ9P055 326 aa11.25□□□□□ -0.61
CSPG4P11-201ENST00000560634 ABCA3Q99758 1704 aa11.25□□□□□ -0.61
CSPG4P11-201ENST00000560634 LOC105371242A0A075B767 164 aa11.24□□□□□ -0.61
CSPG4P11-201ENST00000560634 RRHO14718 337 aa11.24□□□□□ -0.61
CSPG4P11-201ENST00000560634 IL6RP08887 468 aaPredicted RBP11.24□□□□□ -0.61
CSPG4P11-201ENST00000560634 ASPHD2Q6ICH7 369 aa11.24□□□□□ -0.61
CSPG4P11-201ENST00000560634 TM2D1Q9BX74 207 aa11.24□□□□□ -0.61
CSPG4P11-201ENST00000560634 A0A1B0GV90 55 aa11.24□□□□□ -0.61
CSPG4P11-201ENST00000560634 WDYHV1Q96HA8 205 aa11.24□□□□□ -0.61
CSPG4P11-201ENST00000560634 SSBP3Q9BWW4 388 aaPredicted RBP11.24□□□□□ -0.61
CSPG4P11-201ENST00000560634 VCX2Q9H322 139 aa11.24□□□□□ -0.61
CSPG4P11-201ENST00000560634 THSD7AQ9UPZ6 1657 aa11.24□□□□□ -0.61
CSPG4P11-201ENST00000560634 ATG2BQ96BY7 2078 aa11.24□□□□□ -0.61
CSPG4P11-201ENST00000560634 STPG1Q5TH74 334 aa11.24□□□□□ -0.61
CSPG4P11-201ENST00000560634 LAIR2Q6ISS4 152 aa11.24□□□□□ -0.61
CSPG4P11-201ENST00000560634 SLC25A45Q8N413 288 aa11.24□□□□□ -0.61
CSPG4P11-201ENST00000560634 IFI27L2Q9H2X8 130 aa11.24□□□□□ -0.61
CSPG4P11-201ENST00000560634 DOCK1Q14185 1865 aa11.24□□□□□ -0.61
CSPG4P11-201ENST00000560634 IGHV3OR16-12A0A075B7B8 117 aa11.24□□□□□ -0.61
CSPG4P11-201ENST00000560634 A0A087WWC5 75 aa11.24□□□□□ -0.61
CSPG4P11-201ENST00000560634 SUMO2P61956 95 aaKnown RBP11.24□□□□□ -0.61
CSPG4P11-201ENST00000560634 CTAG1AP78358 180 aa11.24□□□□□ -0.61
CSPG4P11-201ENST00000560634 LINC00305Q7Z4B0 112 aa11.24□□□□□ -0.61
CSPG4P11-201ENST00000560634 NPCDR1Q9BY65 106 aa11.24□□□□□ -0.61
CSPG4P11-201ENST00000560634 SNRNP200O75643 2136 aaKnown RBP11.24□□□□□ -0.61
CSPG4P11-201ENST00000560634 BCORQ6W2J9 1755 aa11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 NKX2-8O15522 239 aa11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 EFNB1P98172 346 aa11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 ECM29Q5VYK3 1845 aa11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 A0A1B0GUT8 65 aa11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 B9A039 149 aa11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 C9orf172C9J069 976 aa11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 FOXH1O75593 365 aa11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 THY1P04216 161 aa11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 GLRXP35754 106 aa11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 PIMREGQ9BSJ6 248 aa11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 CFHR5Q9BXR6 569 aa11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 RNASE1P07998 156 aaKnown RBP11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 FTH1P19P0C7X4 201 aa11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 COX6A1P12074 109 aa11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 COX6B1P14854 86 aa11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 LRTM2Q8N967 370 aa11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 C19orf67A6NJJ6 358 aa11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 IGKV3-11P04433 115 aa11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 KLRB1Q12918 225 aa11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 TBR1Q16650 682 aa11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 FAM74A4Q5TZK3 123 aa11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 ATOH7Q8N100 152 aa11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 CACNG8Q8WXS5 425 aa11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 AKIRIN1Q9H9L7 192 aaPredicted RBP11.23□□□□□ -0.61
CSPG4P11-201ENST00000560634 IGHV1-69-2A0A0G2JMI3 117 aa11.22□□□□□ -0.61
CSPG4P11-201ENST00000560634 SRP19P09132 144 aaKnown RBP11.22□□□□□ -0.61
CSPG4P11-201ENST00000560634 ICAM4Q14773 271 aa11.22□□□□□ -0.61
CSPG4P11-201ENST00000560634 PCOLCEQ15113 449 aa11.22□□□□□ -0.61
CSPG4P11-201ENST00000560634 SAP25Q8TEE9 199 aa11.22□□□□□ -0.61
CSPG4P11-201ENST00000560634 MRAP2Q96G30 205 aa11.22□□□□□ -0.61
CSPG4P11-201ENST00000560634 TMEM160Q9NX00 188 aa11.22□□□□□ -0.61
CSPG4P11-201ENST00000560634 EP300Q09472 2414 aaPredicted RBP11.22□□□□□ -0.61
CSPG4P11-201ENST00000560634 TRAV8-6A0A0B4J262 113 aa11.22□□□□□ -0.61
CSPG4P11-201ENST00000560634 A8MXK9 166 aa11.22□□□□□ -0.61
CSPG4P11-201ENST00000560634 TM4SF5O14894 197 aa11.22□□□□□ -0.61
CSPG4P11-201ENST00000560634 CEACAM4O75871 244 aa11.22□□□□□ -0.61
CSPG4P11-201ENST00000560634 NRN1LQ496H8 165 aa11.22□□□□□ -0.61
CSPG4P11-201ENST00000560634 TMEM170BQ5T4T1 132 aa11.22□□□□□ -0.61
CSPG4P11-201ENST00000560634 ZNF600Q6ZNG1 722 aa11.22□□□□□ -0.61
CSPG4P11-201ENST00000560634 Q6ZT83 130 aa11.22□□□□□ -0.61
CSPG4P11-201ENST00000560634 SGK494Q96LW2 274 aa11.22□□□□□ -0.61
CSPG4P11-201ENST00000560634 TRIP11Q15643 1979 aa11.22□□□□□ -0.61
CSPG4P11-201ENST00000560634 FOXI3A8MTJ6 420 aaPredicted RBP11.22□□□□□ -0.61
CSPG4P11-201ENST00000560634 FOXA3P55318 350 aaPredicted RBP11.22□□□□□ -0.61
CSPG4P11-201ENST00000560634 MESP2Q0VG99 397 aa11.22□□□□□ -0.61
CSPG4P11-201ENST00000560634 GCSAMLQ5JQS6 135 aa11.22□□□□□ -0.61
CSPG4P11-201ENST00000560634 DNASE2BQ8WZ79 361 aa11.22□□□□□ -0.61
CSPG4P11-201ENST00000560634 SCARF2Q96GP6 870 aaPredicted RBP11.22□□□□□ -0.61
CSPG4P11-201ENST00000560634 ALKBH7Q9BT30 221 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms