RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 MAS1LP35410 378 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 C7orf69Q9H7B7 122 aa11.49□□□□□ -0.57
TRAF3-208ENST00000560371 RAMP1O60894 148 aa11.48□□□□□ -0.57
TRAF3-208ENST00000560371 CHAC2Q8WUX2 184 aa11.48□□□□□ -0.57
TRAF3-208ENST00000560371 RAX2Q96IS3 184 aa11.48□□□□□ -0.57
TRAF3-208ENST00000560371 NPIPB11E5RHQ5 1161 aa11.48□□□□□ -0.57
TRAF3-208ENST00000560371 HLA-DRB5Q30154 266 aa11.48□□□□□ -0.57
TRAF3-208ENST00000560371 OR5P3Q8WZ94 311 aa11.48□□□□□ -0.57
TRAF3-208ENST00000560371 DUX5Q96PT3 197 aa11.48□□□□□ -0.57
TRAF3-208ENST00000560371 NRIP2Q9BQI9 281 aa11.48□□□□□ -0.57
TRAF3-208ENST00000560371 IL36RNQ9UBH0 155 aa11.48□□□□□ -0.57
TRAF3-208ENST00000560371 RLFQ13129 1914 aa11.48□□□□□ -0.57
TRAF3-208ENST00000560371 FBLL1A6NHQ2 334 aaKnown RBP11.48□□□□□ -0.57
TRAF3-208ENST00000560371 NPIPB6E9PJ23 425 aa11.48□□□□□ -0.57
TRAF3-208ENST00000560371 ST6GAL2Q96JF0 529 aa11.48□□□□□ -0.57
TRAF3-208ENST00000560371 DNAJC4Q9NNZ3 241 aa11.48□□□□□ -0.57
TRAF3-208ENST00000560371 FREM1Q5H8C1 2179 aa11.48□□□□□ -0.57
TRAF3-208ENST00000560371 SNURFLB1AK76 121 aa11.48□□□□□ -0.57
TRAF3-208ENST00000560371 S1PR2O95136 353 aa11.48□□□□□ -0.57
TRAF3-208ENST00000560371 UMODP07911 640 aa11.48□□□□□ -0.57
TRAF3-208ENST00000560371 Q96M66 194 aa11.48□□□□□ -0.57
TRAF3-208ENST00000560371 MFAP2P55001 183 aa11.48□□□□□ -0.57
TRAF3-208ENST00000560371 ZNF79Q15937 498 aa11.48□□□□□ -0.57
TRAF3-208ENST00000560371 AWAT1Q58HT5 328 aa11.48□□□□□ -0.57
TRAF3-208ENST00000560371 OR5AU1Q8NGC0 362 aa11.48□□□□□ -0.57
TRAF3-208ENST00000560371 LYRM2Q9NU23 88 aaPredicted RBP11.48□□□□□ -0.57
TRAF3-208ENST00000560371 DPM3Q9P2X0 92 aa11.48□□□□□ -0.57
TRAF3-208ENST00000560371 LSM10Q969L4 123 aaKnown RBP11.48□□□□□ -0.57
TRAF3-208ENST00000560371 SGK494Q96LW2 274 aa11.48□□□□□ -0.57
TRAF3-208ENST00000560371 A0A0B4J293 547 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 MRPL14Q6P1L8 145 aaKnown RBP11.47□□□□□ -0.57
TRAF3-208ENST00000560371 ZNF256Q9Y2P7 627 aaPredicted RBP11.47□□□□□ -0.57
TRAF3-208ENST00000560371 MALRD1Q5VYJ5 2156 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 TMEM262E9PQX1 116 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 PQLC2Q6ZP29 291 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 TMEM189A5PLL7 270 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 ZNF708P17019 499 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 IER3P46695 156 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 MRPS18CQ9Y3D5 142 aaKnown RBP11.47□□□□□ -0.57
TRAF3-208ENST00000560371 RAB9AP51151 201 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 UNQ9370/PRO34162Q6UXP9 181 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 TMEM252Q8N6L7 170 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 OR51G1Q8NGK1 321 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 ZNF502Q8TBZ5 544 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 ZNF418Q8TF45 676 aaPredicted RBP11.47□□□□□ -0.57
TRAF3-208ENST00000560371 HSPB7Q9UBY9 170 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 SIAH2O43255 324 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 TRGV3P03979 118 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 TNFRSF9Q07011 255 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 TMEM191AQ9H0A3 160 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 G6PC2Q9NQR9 355 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 TNFSF18Q9UNG2 199 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 KMT2EQ8IZD2 1858 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 IGHV3-35A0A0C4DH35 117 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 PGPA6NDG6 321 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 TM4SF5O14894 197 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 APCSP02743 223 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 IGHV1-2P23083 117 aa11.47□□□□□ -0.57
TRAF3-208ENST00000560371 IGHV2OR16-5A0A0B4J2B6 119 aa11.46□□□□□ -0.57
TRAF3-208ENST00000560371 IGHV3-48P01763 117 aa11.46□□□□□ -0.57
TRAF3-208ENST00000560371 TSPOP30536 169 aa11.46□□□□□ -0.57
TRAF3-208ENST00000560371 RUNX1Q01196 453 aa11.46□□□□□ -0.57
TRAF3-208ENST00000560371 ACP7Q6ZNF0 438 aa11.46□□□□□ -0.57
TRAF3-208ENST00000560371 AQP3Q92482 292 aa11.46□□□□□ -0.57
TRAF3-208ENST00000560371 KIF26AQ9ULI4 1882 aaPredicted RBP11.46□□□□□ -0.57
TRAF3-208ENST00000560371 FAM90A26D6RGX4 464 aa11.46□□□□□ -0.57
TRAF3-208ENST00000560371 ISOC2Q96AB3 205 aa11.46□□□□□ -0.57
TRAF3-208ENST00000560371 LINC01590Q5TEZ4 76 aa11.46□□□□□ -0.58
TRAF3-208ENST00000560371 C9orf106Q8NAJ2 232 aa11.46□□□□□ -0.58
TRAF3-208ENST00000560371 PPP1R3EQ9H7J1 279 aa11.46□□□□□ -0.58
TRAF3-208ENST00000560371 WDYHV1Q96HA8 205 aa11.46□□□□□ -0.58
TRAF3-208ENST00000560371 TMEM218A2RU14 115 aa11.46□□□□□ -0.58
TRAF3-208ENST00000560371 TRBV5-7A0A0A0MS05 114 aa11.45□□□□□ -0.58
TRAF3-208ENST00000560371 NUTF2P61970 127 aaKnown RBP11.45□□□□□ -0.58
TRAF3-208ENST00000560371 ZNF345Q14585 488 aa11.45□□□□□ -0.58
TRAF3-208ENST00000560371 MRPL13Q9BYD1 178 aaKnown RBP11.45□□□□□ -0.58
TRAF3-208ENST00000560371 H3BQ15 152 aa11.45□□□□□ -0.58
TRAF3-208ENST00000560371 STAG3L2P0CL84 134 aa11.45□□□□□ -0.58
TRAF3-208ENST00000560371 FAM53AQ6NSI3 398 aaPredicted RBP11.45□□□□□ -0.58
TRAF3-208ENST00000560371 GPR132Q9UNW8 380 aa11.45□□□□□ -0.58
TRAF3-208ENST00000560371 NLRC5Q86WI3 1866 aa11.45□□□□□ -0.58
TRAF3-208ENST00000560371 CACNA1AO00555 2505 aa11.45□□□□□ -0.58
TRAF3-208ENST00000560371 IGLV3-12A0A075B6K2 115 aa11.45□□□□□ -0.58
TRAF3-208ENST00000560371 A0A0G2JLM5 398 aa11.45□□□□□ -0.58
TRAF3-208ENST00000560371 BTF3P20290 206 aaKnown RBP11.45□□□□□ -0.58
TRAF3-208ENST00000560371 YAE1D1Q9NRH1 226 aa11.45□□□□□ -0.58
TRAF3-208ENST00000560371 C17orf100A8MU93 164 aa11.45□□□□□ -0.58
TRAF3-208ENST00000560371 SGMS2Q8NHU3 365 aa11.45□□□□□ -0.58
TRAF3-208ENST00000560371 ELOVL1Q9BW60 279 aa11.45□□□□□ -0.58
TRAF3-208ENST00000560371 PPP1R17O96001 155 aa11.45□□□□□ -0.58
TRAF3-208ENST00000560371 GPX1P07203 203 aa11.45□□□□□ -0.58
TRAF3-208ENST00000560371 ZFP36L1Q07352 338 aaKnown RBP11.45□□□□□ -0.58
TRAF3-208ENST00000560371 IGKV3-20P01619 116 aa11.45□□□□□ -0.58
TRAF3-208ENST00000560371 NRN1LQ496H8 165 aa11.45□□□□□ -0.58
TRAF3-208ENST00000560371 TAF15Q92804 592 aaKnown RBP eCLIP11.45□□□□□ -0.58
TRAF3-208ENST00000560371 PSG7Q13046 419 aa11.44□□□□□ -0.58
TRAF3-208ENST00000560371 TBX15Q96SF7 602 aa11.44□□□□□ -0.58
TRAF3-208ENST00000560371 TCF19Q9Y242 345 aa11.44□□□□□ -0.58
TRAF3-208ENST00000560371 CKS2P33552 79 aa11.44□□□□□ -0.58
TRAF3-208ENST00000560371 MEOX2P50222 304 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms