RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 GGTLC1Q9BX51 225 aa6.89□□□□□ -1.31
HDDC3-204ENST00000559834 WFDC10AQ9H1F0 79 aa6.89□□□□□ -1.31
HDDC3-204ENST00000559834 ATG5Q9H1Y0 275 aa6.89□□□□□ -1.31
HDDC3-204ENST00000559834 DCSTAMPQ9H295 470 aa6.89□□□□□ -1.31
HDDC3-204ENST00000559834 DMRT1Q9Y5R6 373 aa6.89□□□□□ -1.31
HDDC3-204ENST00000559834 TRBV7-1A0A0A6YYK4 115 aa6.88□□□□□ -1.31
HDDC3-204ENST00000559834 TRAV25A0A0B4J276 109 aa6.88□□□□□ -1.31
HDDC3-204ENST00000559834 KBTBD11O94819 623 aa6.88□□□□□ -1.31
HDDC3-204ENST00000559834 NDUFB8O95169 186 aa6.88□□□□□ -1.31
HDDC3-204ENST00000559834 CLEC3BP05452 202 aa6.88□□□□□ -1.31
HDDC3-204ENST00000559834 CRYGCP07315 174 aa6.88□□□□□ -1.31
HDDC3-204ENST00000559834 IL6RP08887 468 aaPredicted RBP6.88□□□□□ -1.31
HDDC3-204ENST00000559834 ZNF735P0CB33 412 aa6.88□□□□□ -1.31
HDDC3-204ENST00000559834 RAB3BP20337 219 aa6.88□□□□□ -1.31
HDDC3-204ENST00000559834 NFYAP23511 347 aaPredicted RBP6.88□□□□□ -1.31
HDDC3-204ENST00000559834 PSMB6P28072 239 aa6.88□□□□□ -1.31
HDDC3-204ENST00000559834 CNIH2Q6PI25 160 aa6.88□□□□□ -1.31
HDDC3-204ENST00000559834 RBPMS2Q6ZRY4 209 aaKnown RBP6.88□□□□□ -1.31
HDDC3-204ENST00000559834 SLC38A6Q8IZM9 456 aa6.88□□□□□ -1.31
HDDC3-204ENST00000559834 TMEM61Q8N0U2 210 aa6.88□□□□□ -1.31
HDDC3-204ENST00000559834 VKORC1L1Q8N0U8 176 aa6.88□□□□□ -1.31
HDDC3-204ENST00000559834 TCTEX1D2Q8WW35 142 aa6.88□□□□□ -1.31
HDDC3-204ENST00000559834 CXorf58Q96LI9 332 aa6.88□□□□□ -1.31
HDDC3-204ENST00000559834 OVOL2Q9BRP0 275 aa6.88□□□□□ -1.31
HDDC3-204ENST00000559834 THYN1Q9P016 225 aa6.88□□□□□ -1.31
HDDC3-204ENST00000559834 RYR2Q92736 4967 aa6.87□□□□□ -1.31
HDDC3-204ENST00000559834 IGKV1D-8A0A087WSZ0 117 aa6.87□□□□□ -1.31
HDDC3-204ENST00000559834 TMEM213A2RRL7 107 aa6.87□□□□□ -1.31
HDDC3-204ENST00000559834 CXorf65A6NEN9 183 aa6.87□□□□□ -1.31
HDDC3-204ENST00000559834 NUPR2A6NF83 97 aa6.87□□□□□ -1.31
HDDC3-204ENST00000559834 A8MWP6 167 aa6.87□□□□□ -1.31
HDDC3-204ENST00000559834 TEX22C9J3V5 150 aa6.87□□□□□ -1.31
HDDC3-204ENST00000559834 SCGNO76038 276 aa6.87□□□□□ -1.31
HDDC3-204ENST00000559834 SCAF4O95104 1147 aaKnown RBP6.87□□□□□ -1.31
HDDC3-204ENST00000559834 LY6G6CO95867 125 aa6.87□□□□□ -1.31
HDDC3-204ENST00000559834 IGHV3-23P01764 117 aa6.87□□□□□ -1.31
HDDC3-204ENST00000559834 GALP22466 123 aa6.87□□□□□ -1.31
HDDC3-204ENST00000559834 CRHBPP24387 322 aa6.87□□□□□ -1.31
HDDC3-204ENST00000559834 OR10A3P58181 314 aa6.87□□□□□ -1.31
HDDC3-204ENST00000559834 RPL30P62888 115 aaKnown RBP6.87□□□□□ -1.31
HDDC3-204ENST00000559834 RPL8P62917 257 aaKnown RBP6.87□□□□□ -1.31
HDDC3-204ENST00000559834 KLK9Q2XQG4 91 aa6.87□□□□□ -1.31
HDDC3-204ENST00000559834 TM4SF20Q53R12 229 aa6.87□□□□□ -1.31
HDDC3-204ENST00000559834 OR2B11Q5JQS5 317 aa6.87□□□□□ -1.31
HDDC3-204ENST00000559834 HACD4Q5VWC8 232 aa6.87□□□□□ -1.31
HDDC3-204ENST00000559834 ZNF66Q6ZN08 573 aa6.87□□□□□ -1.31
HDDC3-204ENST00000559834 PUSL1Q8N0Z8 303 aaKnown RBP6.87□□□□□ -1.31
HDDC3-204ENST00000559834 MFSD4AQ8N468 514 aa6.87□□□□□ -1.31
HDDC3-204ENST00000559834 OR4A5Q8NH83 315 aa6.87□□□□□ -1.31
HDDC3-204ENST00000559834 CCDC140Q96MF4 163 aa6.87□□□□□ -1.31
HDDC3-204ENST00000559834 FANCD2OSQ96PS1 177 aa6.87□□□□□ -1.31
HDDC3-204ENST00000559834 MRPL27Q9P0M9 148 aaKnown RBP6.87□□□□□ -1.31
HDDC3-204ENST00000559834 KLK9Q9UKQ9 250 aa6.87□□□□□ -1.31
HDDC3-204ENST00000559834 SPATA2Q9UM82 520 aa6.87□□□□□ -1.31
HDDC3-204ENST00000559834 TRDV1A0A1B0GX56 115 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 UBE2CO00762 179 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 CYB5BO43169 146 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 C8orf88P0DMB2 117 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 MYOD1P15172 320 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 AREGP15514 252 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 CTRB1P17538 263 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 EDN2P20800 178 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 BMI1P35226 326 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 APOC4P55056 127 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 ELLP55199 621 aaPredicted RBP6.86□□□□□ -1.31
HDDC3-204ENST00000559834 GNG2P59768 71 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 ZNF585BQ52M93 769 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 CTRB2Q6GPI1 263 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 PLET1Q6UQ28 207 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 Q6ZWC4 215 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 ZNF367Q7RTV3 350 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 WFDC3Q8IUB2 231 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 OR2C3Q8N628 320 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 ZBTB34Q8NCN2 500 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 OR1L6Q8NGR2 347 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 CACNG8Q8WXS5 425 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 LINC00476Q8WZB0 136 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 HRASLSQ9HDD0 168 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 MLXQ9UH92 298 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 TP53TG1Q9Y2A0 90 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 KLK5Q9Y337 293 aaPredicted RBP6.86□□□□□ -1.31
HDDC3-204ENST00000559834 UFC1Q9Y3C8 167 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 S4R3C0 116 aa6.86□□□□□ -1.31
HDDC3-204ENST00000559834 DYNC2H1Q8NCM8 4307 aaKnown RBP6.86□□□□□ -1.31
HDDC3-204ENST00000559834 IGLV11-55A0A075B6I3 123 aa6.85□□□□□ -1.31
HDDC3-204ENST00000559834 IGKV1D-13A0A0B4J2D9 117 aa6.85□□□□□ -1.31
HDDC3-204ENST00000559834 E7EUB6 86 aa6.85□□□□□ -1.31
HDDC3-204ENST00000559834 SPRY2O43597 315 aa6.85□□□□□ -1.31
HDDC3-204ENST00000559834 IGLV2-14P01704 120 aa6.85□□□□□ -1.31
HDDC3-204ENST00000559834 IGKV1-13P0DP09 117 aa6.85□□□□□ -1.31
HDDC3-204ENST00000559834 HLA-GP17693 338 aa6.85□□□□□ -1.31
HDDC3-204ENST00000559834 TBCEQ15813 527 aaPredicted RBP6.85□□□□□ -1.31
HDDC3-204ENST00000559834 LAMTOR1Q6IAA8 161 aa6.85□□□□□ -1.31
HDDC3-204ENST00000559834 CEMP1Q6PRD7 247 aaPredicted RBP6.85□□□□□ -1.31
HDDC3-204ENST00000559834 BTNL8Q6UX41 500 aa6.85□□□□□ -1.31
HDDC3-204ENST00000559834 IZUMO2Q6UXV1 221 aa6.85□□□□□ -1.31
HDDC3-204ENST00000559834 SSX9Q7RTT3 188 aa6.85□□□□□ -1.31
HDDC3-204ENST00000559834 TMEM217Q8N7C4 229 aa6.85□□□□□ -1.31
HDDC3-204ENST00000559834 SPAG8Q99932 426 aaPredicted RBP6.85□□□□□ -1.31
HDDC3-204ENST00000559834 SRSF8Q9BRL6 282 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms