RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 NABP2Q9BQ15 211 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 SPATA25Q9BR10 227 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 ZNF251Q9BRH9 671 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 MRPL20Q9BYC9 149 aaKnown RBP4.47□□□□□ -1.69
USP3-215ENST00000559771 SLC2A8Q9NY64 477 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 KLK11Q9UBX7 282 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 ZMAT5Q9UDW3 170 aaKnown RBP4.47□□□□□ -1.69
USP3-215ENST00000559771 WSB1Q9Y6I7 421 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 TMEM272A0A1B0GTI8 110 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 HMSDA8MTL9 139 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 FCN1O00602 326 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 TXNL1O43396 289 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 PROP1O75360 226 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 NDUFA3O95167 84 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 HLA-DRB1P01911 266 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 CSTBP04080 98 aaKnown RBP4.46□□□□□ -1.7
USP3-215ENST00000559771 CD74P04233 296 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 OR8U8P0C7N1 319 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 FRMD6-AS1P0C7T7 363 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 GTF2F2P13984 249 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 IL3RAP26951 378 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 BLVRBP30043 206 aaPredicted RBP4.46□□□□□ -1.7
USP3-215ENST00000559771 PPP1CCP36873 323 aaKnown RBP4.46□□□□□ -1.7
USP3-215ENST00000559771 OR3A3P47888 321 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 RAB9AP51151 201 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 INSL3P51460 131 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 CCR6P51684 374 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 CRIP2P52943 208 aaPredicted RBP4.46□□□□□ -1.7
USP3-215ENST00000559771 CLDN12P56749 244 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 FGL1Q08830 312 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 ZNF616Q08AN1 781 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 ACTBL2Q562R1 376 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 LAMTOR1Q6IAA8 161 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 STEAP1BQ6NZ63 245 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 GLIPR1L1Q6UWM5 242 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 ZNF833PQ6ZTB9 187 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 OVCH2Q7RTZ1 564 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 Q8N1Y9 231 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 PRR18Q8N4B5 295 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 NPBQ8NG41 125 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 MRPL30Q8TCC3 161 aaKnown RBP4.46□□□□□ -1.7
USP3-215ENST00000559771 FAM46BQ96A09 425 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 CPNE2Q96FN4 548 aaPredicted RBP4.46□□□□□ -1.7
USP3-215ENST00000559771 CCDC140Q96MF4 163 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 RCHY1Q96PM5 261 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 PRRT1Q99946 306 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 ATG5Q9H1Y0 275 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 IFI27L2Q9H2X8 130 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 BANF2Q9H503 90 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 AUNIPQ9H7T9 357 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 TAF9BQ9HBM6 251 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 MGAT4AQ9UM21 535 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 VSIG4Q9Y279 399 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 MRPS28Q9Y2Q9 187 aaKnown RBP4.46□□□□□ -1.7
USP3-215ENST00000559771 HSPB11Q9Y547 144 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 SMAD5-AS1Q9Y6J3 95 aa4.46□□□□□ -1.7
USP3-215ENST00000559771 TRAV18A0A075B6X5 111 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 IGHV4OR15-8A0A075B7B6 117 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 A0A087WW49 117 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 SAA2-SAA4A0A096LPE2 208 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 TRAV41A0A0B4J266 112 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 DISC1C4P0D8 188 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 MCRIP1C9JLW8 97 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 OVOL1O14753 267 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 ARPC1BO15143 372 aaKnown RBP4.45□□□□□ -1.7
USP3-215ENST00000559771 NBR2O15453 112 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 CA11O75493 328 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 SAA2P0DJI9 122 aaPredicted RBP4.45□□□□□ -1.7
USP3-215ENST00000559771 CT45A6P0DMU7 189 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 CT45A5P0DMU8 189 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 CT45A7P0DMV0 189 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 GP9P14770 177 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 MGMTP16455 207 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 HLA-GP17693 338 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 CBX5P45973 191 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 VEGFCP49767 419 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 UBE2MP61081 183 aaKnown RBP4.45□□□□□ -1.7
USP3-215ENST00000559771 SSBP2P81877 361 aaPredicted RBP4.45□□□□□ -1.7
USP3-215ENST00000559771 QRFPP83859 136 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 MMDQ15546 238 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 HMGN3Q15651 99 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 C5orf64Q2M2E5 130 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 TMEM30BQ3MIR4 351 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 TM4SF20Q53R12 229 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 LY6G6FQ5SQ64 297 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 ACSM6Q6P461 480 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 TEX261Q6UWH6 196 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 ZNF429Q86V71 674 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 JAGN1Q8N5M9 183 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 OR4C16Q8NGL9 310 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 OR2T35Q8NGX2 323 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 KCNG3Q8TAE7 436 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 NEK7Q8TDX7 302 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 MRPS24Q96EL2 167 aaKnown RBP4.45□□□□□ -1.7
USP3-215ENST00000559771 SCGB3A2Q96PL1 93 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 SULT4A1Q9BR01 284 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 TM2D3Q9BRN9 247 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 GINS4Q9BRT9 223 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 ABHD14AQ9BUJ0 271 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 TOLLIPQ9H0E2 274 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms