RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 OR51E2Q9H255 320 aa9.83□□□□□ -0.84
TPM1-220ENST00000559556 KLK9Q9UKQ9 250 aa9.83□□□□□ -0.84
TPM1-220ENST00000559556 ELF5Q9UKW6 265 aaPredicted RBP9.83□□□□□ -0.84
TPM1-220ENST00000559556 RBMX2Q9Y388 322 aaKnown RBP9.83□□□□□ -0.84
TPM1-220ENST00000559556 OR2W1Q9Y3N9 320 aa9.83□□□□□ -0.84
TPM1-220ENST00000559556 A0A1B0GW64 132 aa9.82□□□□□ -0.84
TPM1-220ENST00000559556 TMEM213A2RRL7 107 aa9.82□□□□□ -0.84
TPM1-220ENST00000559556 HMX3A6NHT5 357 aa9.82□□□□□ -0.84
TPM1-220ENST00000559556 OR2C1O95371 312 aa9.82□□□□□ -0.84
TPM1-220ENST00000559556 IL6RP08887 468 aaPredicted RBP9.82□□□□□ -0.84
TPM1-220ENST00000559556 ZNF735P0CB33 412 aa9.82□□□□□ -0.84
TPM1-220ENST00000559556 RAB3BP20337 219 aa9.82□□□□□ -0.84
TPM1-220ENST00000559556 CBLN1P23435 193 aa9.82□□□□□ -0.84
TPM1-220ENST00000559556 MAS1LP35410 378 aa9.82□□□□□ -0.84
TPM1-220ENST00000559556 MAP2K4P45985 399 aa9.82□□□□□ -0.84
TPM1-220ENST00000559556 RPL27AP46776 148 aaKnown RBP9.82□□□□□ -0.84
TPM1-220ENST00000559556 EIF4EBP1Q13541 118 aaPredicted RBP9.82□□□□□ -0.84
TPM1-220ENST00000559556 OR2B11Q5JQS5 317 aa9.82□□□□□ -0.84
TPM1-220ENST00000559556 C19orf35Q6ZS72 473 aa9.82□□□□□ -0.84
TPM1-220ENST00000559556 SLC16A13Q7RTY0 426 aa9.82□□□□□ -0.84
TPM1-220ENST00000559556 TMEM61Q8N0U2 210 aa9.82□□□□□ -0.84
TPM1-220ENST00000559556 VKORC1L1Q8N0U8 176 aa9.82□□□□□ -0.84
TPM1-220ENST00000559556 PUSL1Q8N0Z8 303 aaKnown RBP9.82□□□□□ -0.84
TPM1-220ENST00000559556 OR4S2Q8NH73 311 aa9.82□□□□□ -0.84
TPM1-220ENST00000559556 VSTM2AQ8TAG5 236 aa9.82□□□□□ -0.84
TPM1-220ENST00000559556 CACNG8Q8WXS5 425 aa9.82□□□□□ -0.84
TPM1-220ENST00000559556 FANCD2OSQ96PS1 177 aa9.82□□□□□ -0.84
TPM1-220ENST00000559556 DCUN1D5Q9BTE7 237 aa9.82□□□□□ -0.84
TPM1-220ENST00000559556 CCDC90BQ9GZT6 254 aa9.82□□□□□ -0.84
TPM1-220ENST00000559556 SLC2A9Q9NRM0 540 aa9.82□□□□□ -0.84
TPM1-220ENST00000559556 NDUFB11Q9NX14 153 aa9.82□□□□□ -0.84
TPM1-220ENST00000559556 FBXL7Q9UJT9 491 aa9.82□□□□□ -0.84
TPM1-220ENST00000559556 IGKV1D-13A0A0B4J2D9 117 aa9.81□□□□□ -0.84
TPM1-220ENST00000559556 E7EUB6 86 aa9.81□□□□□ -0.84
TPM1-220ENST00000559556 CRYGCP07315 174 aa9.81□□□□□ -0.84
TPM1-220ENST00000559556 CTXN2P0C2S0 81 aa9.81□□□□□ -0.84
TPM1-220ENST00000559556 IGKV1-13P0DP09 117 aa9.81□□□□□ -0.84
TPM1-220ENST00000559556 NFYAP23511 347 aaPredicted RBP9.81□□□□□ -0.84
TPM1-220ENST00000559556 MYL9P24844 172 aa9.81□□□□□ -0.84
TPM1-220ENST00000559556 ARL3P36405 182 aa9.81□□□□□ -0.84
TPM1-220ENST00000559556 ZNF367Q7RTV3 350 aa9.81□□□□□ -0.84
TPM1-220ENST00000559556 NR2C2APQ86WQ0 139 aa9.81□□□□□ -0.84
TPM1-220ENST00000559556 FYTTD1Q96QD9 318 aaKnown RBP9.81□□□□□ -0.84
TPM1-220ENST00000559556 OR2A7Q96R45 310 aa9.81□□□□□ -0.84
TPM1-220ENST00000559556 HSD17B10Q99714 261 aaKnown RBP9.81□□□□□ -0.84
TPM1-220ENST00000559556 MLXQ9UH92 298 aa9.81□□□□□ -0.84
TPM1-220ENST00000559556 DPPA5A6NC42 116 aa9.8□□□□□ -0.84
TPM1-220ENST00000559556 J3QRK9 145 aa9.8□□□□□ -0.84
TPM1-220ENST00000559556 TNFAIP8O95379 198 aa9.8□□□□□ -0.84
TPM1-220ENST00000559556 DHFRP00374 187 aa9.8□□□□□ -0.84
TPM1-220ENST00000559556 CTRB1P17538 263 aa9.8□□□□□ -0.84
TPM1-220ENST00000559556 BRWD1-AS2P59051 145 aa9.8□□□□□ -0.84
TPM1-220ENST00000559556 HACD4Q5VWC8 232 aa9.8□□□□□ -0.84
TPM1-220ENST00000559556 ZNF57Q68EA5 555 aaPredicted RBP9.8□□□□□ -0.84
TPM1-220ENST00000559556 CTRB2Q6GPI1 263 aa9.8□□□□□ -0.84
TPM1-220ENST00000559556 CLEC19AQ6UXS0 136 aa9.8□□□□□ -0.84
TPM1-220ENST00000559556 LINC00476Q8WZB0 136 aa9.8□□□□□ -0.84
TPM1-220ENST00000559556 OVOL2Q9BRP0 275 aa9.8□□□□□ -0.84
TPM1-220ENST00000559556 GGTLC1Q9BX51 225 aa9.8□□□□□ -0.84
TPM1-220ENST00000559556 ATG5Q9H1Y0 275 aa9.8□□□□□ -0.84
TPM1-220ENST00000559556 DCSTAMPQ9H295 470 aa9.8□□□□□ -0.84
TPM1-220ENST00000559556 TRDV1A0A1B0GX56 115 aa9.79□□□□□ -0.84
TPM1-220ENST00000559556 MRPS14O60783 128 aaKnown RBP9.79□□□□□ -0.84
TPM1-220ENST00000559556 NDUFB8O95169 186 aa9.79□□□□□ -0.84
TPM1-220ENST00000559556 IGHV3-23P01764 117 aa9.79□□□□□ -0.84
TPM1-220ENST00000559556 AREGP15514 252 aa9.79□□□□□ -0.84
TPM1-220ENST00000559556 GALP22466 123 aa9.79□□□□□ -0.84
TPM1-220ENST00000559556 PSMB6P28072 239 aa9.79□□□□□ -0.84
TPM1-220ENST00000559556 CDNFQ49AH0 187 aa9.79□□□□□ -0.84
TPM1-220ENST00000559556 FAM106AQ4KMX7 169 aa9.79□□□□□ -0.84
TPM1-220ENST00000559556 OR4A47Q6IF82 309 aa9.79□□□□□ -0.84
TPM1-220ENST00000559556 CNIH2Q6PI25 160 aa9.79□□□□□ -0.84
TPM1-220ENST00000559556 OR52B4Q8NGK2 314 aa9.79□□□□□ -0.84
TPM1-220ENST00000559556 NUDCD2Q8WVJ2 157 aa9.79□□□□□ -0.84
TPM1-220ENST00000559556 TCTEX1D2Q8WW35 142 aa9.79□□□□□ -0.84
TPM1-220ENST00000559556 EEF1AKMT3Q96AZ1 226 aa9.79□□□□□ -0.84
TPM1-220ENST00000559556 ST6GALNAC5Q9BVH7 336 aa9.79□□□□□ -0.84
TPM1-220ENST00000559556 S4R3C0 116 aa9.79□□□□□ -0.84
TPM1-220ENST00000559556 IGLV11-55A0A075B6I3 123 aa9.78□□□□□ -0.84
TPM1-220ENST00000559556 TRBV7-1A0A0A6YYK4 115 aa9.78□□□□□ -0.84
TPM1-220ENST00000559556 TMEM235A6NFC5 223 aa9.78□□□□□ -0.84
TPM1-220ENST00000559556 MFSD2BA6NFX1 497 aa9.78□□□□□ -0.84
TPM1-220ENST00000559556 CGB1A6NKQ9 187 aa9.78□□□□□ -0.84
TPM1-220ENST00000559556 HRASP01112 189 aa9.78□□□□□ -0.84
TPM1-220ENST00000559556 HIST1H1BP16401 226 aaKnown RBP9.78□□□□□ -0.84
TPM1-220ENST00000559556 GABARAPL2P60520 117 aa9.78□□□□□ -0.84
TPM1-220ENST00000559556 RPL8P62917 257 aaKnown RBP9.78□□□□□ -0.84
TPM1-220ENST00000559556 ANKRD55Q3KP44 614 aa9.78□□□□□ -0.84
TPM1-220ENST00000559556 KCTD21Q4G0X4 260 aa9.78□□□□□ -0.84
TPM1-220ENST00000559556 ZNF66Q6ZN08 573 aa9.78□□□□□ -0.84
TPM1-220ENST00000559556 UXS1Q8NBZ7 420 aa9.78□□□□□ -0.84
TPM1-220ENST00000559556 BET1LQ9NYM9 111 aa9.78□□□□□ -0.84
TPM1-220ENST00000559556 TAS2R8Q9NYW2 309 aa9.78□□□□□ -0.84
TPM1-220ENST00000559556 SPATA2Q9UM82 520 aa9.78□□□□□ -0.84
TPM1-220ENST00000559556 SELENOKQ9Y6D0 94 aa9.78□□□□□ -0.84
TPM1-220ENST00000559556 LOC102724200A0A096LPH7 203 aaPredicted RBP9.77□□□□□ -0.85
TPM1-220ENST00000559556 TRAV25A0A0B4J276 109 aa9.77□□□□□ -0.85
TPM1-220ENST00000559556 ZNF320A2RRD8 509 aa9.77□□□□□ -0.85
TPM1-220ENST00000559556 SSX5O60225 188 aa9.77□□□□□ -0.85
TPM1-220ENST00000559556 SCGNO76038 276 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms