RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 ADAMTSL5Q6ZMM2 481 aa11.31□□□□□ -0.6
LRRC28-213ENST00000559399 PUSL1Q8N0Z8 303 aaKnown RBP11.31□□□□□ -0.6
LRRC28-213ENST00000559399 TMEM167AQ8TBQ9 72 aa11.31□□□□□ -0.6
LRRC28-213ENST00000559399 FYTTD1Q96QD9 318 aaKnown RBP11.31□□□□□ -0.6
LRRC28-213ENST00000559399 PLEKHA3Q9HB20 300 aa11.31□□□□□ -0.6
LRRC28-213ENST00000559399 SLC2A8Q9NY64 477 aa11.31□□□□□ -0.6
LRRC28-213ENST00000559399 FBXL7Q9UJT9 491 aa11.31□□□□□ -0.6
LRRC28-213ENST00000559399 GGCTO75223 188 aaKnown RBP11.3□□□□□ -0.6
LRRC28-213ENST00000559399 TPPPO94811 219 aa11.3□□□□□ -0.6
LRRC28-213ENST00000559399 DHFRP00374 187 aa11.3□□□□□ -0.6
LRRC28-213ENST00000559399 HRASP01112 189 aa11.3□□□□□ -0.6
LRRC28-213ENST00000559399 IL6RP08887 468 aaPredicted RBP11.3□□□□□ -0.6
LRRC28-213ENST00000559399 KIR2DS2P43631 304 aa11.3□□□□□ -0.6
LRRC28-213ENST00000559399 SCAND1P57086 179 aa11.3□□□□□ -0.6
LRRC28-213ENST00000559399 ARPC4P59998 168 aa11.3□□□□□ -0.6
LRRC28-213ENST00000559399 C19orf35Q6ZS72 473 aa11.3□□□□□ -0.6
LRRC28-213ENST00000559399 MFSD4AQ8N468 514 aa11.3□□□□□ -0.6
LRRC28-213ENST00000559399 OR13F1Q8NGS4 319 aa11.3□□□□□ -0.6
LRRC28-213ENST00000559399 NEURL2Q9BR09 285 aa11.3□□□□□ -0.6
LRRC28-213ENST00000559399 Q9H521 79 aa11.3□□□□□ -0.6
LRRC28-213ENST00000559399 SLC2A9Q9NRM0 540 aa11.3□□□□□ -0.6
LRRC28-213ENST00000559399 ETV7Q9Y603 341 aa11.3□□□□□ -0.6
LRRC28-213ENST00000559399 CEPT1Q9Y6K0 416 aa11.3□□□□□ -0.6
LRRC28-213ENST00000559399 C2orf70A6NJV1 201 aa11.29□□□□□ -0.6
LRRC28-213ENST00000559399 HLA-AP01891 365 aaKnown RBP11.29□□□□□ -0.6
LRRC28-213ENST00000559399 ZNF735P0CB33 412 aa11.29□□□□□ -0.6
LRRC28-213ENST00000559399 SDC2P34741 201 aa11.29□□□□□ -0.6
LRRC28-213ENST00000559399 BRWD1-AS2P59051 145 aa11.29□□□□□ -0.6
LRRC28-213ENST00000559399 RPL8P62917 257 aaKnown RBP11.29□□□□□ -0.6
LRRC28-213ENST00000559399 MXD1Q05195 221 aa11.29□□□□□ -0.6
LRRC28-213ENST00000559399 MSMO1Q15800 293 aa11.29□□□□□ -0.6
LRRC28-213ENST00000559399 SSX9Q7RTT3 188 aa11.29□□□□□ -0.6
LRRC28-213ENST00000559399 BEST4Q8NFU0 473 aa11.29□□□□□ -0.6
LRRC28-213ENST00000559399 SECTM1Q8WVN6 248 aa11.29□□□□□ -0.6
LRRC28-213ENST00000559399 GAR1Q9NY12 217 aaKnown RBP11.29□□□□□ -0.6
LRRC28-213ENST00000559399 DMRT1Q9Y5R6 373 aa11.29□□□□□ -0.6
LRRC28-213ENST00000559399 DNAH7Q8WXX0 4024 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 TRAV18A0A075B6X5 111 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 A0A1B0GW64 132 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 E7EUB6 86 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 LGALS9O00182 355 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 TNFSF12O43508 249 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 OR2C1O95371 312 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 CRYGCP07315 174 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 FOLR2P14207 255 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 AREGP15514 252 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 HLA-GP17693 338 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 PSMB6P28072 239 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 FCGR2CP31995 323 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 GUCA2BQ16661 112 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 DEFB114Q30KQ6 69 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 ZNF773Q6PK81 442 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 LINC00322Q6ZN03 302 aaPredicted RBP11.28□□□□□ -0.6
LRRC28-213ENST00000559399 HOGA1Q86XE5 327 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 OR4A5Q8NH83 315 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 SLC25A38Q96DW6 304 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 CCDC140Q96MF4 163 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 FANCD2OSQ96PS1 177 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 GPHA2Q96T91 129 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 AIFM2Q9BRQ8 373 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 YTHDF1Q9BYJ9 559 aaKnown RBP11.28□□□□□ -0.6
LRRC28-213ENST00000559399 RETNQ9HD89 108 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 ZC4H2Q9NQZ6 224 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 CCL28Q9NRJ3 127 aa11.28□□□□□ -0.6
LRRC28-213ENST00000559399 TECRQ9NZ01 308 aaKnown RBP11.28□□□□□ -0.6
LRRC28-213ENST00000559399 DYNC2H1Q8NCM8 4307 aaKnown RBP11.28□□□□□ -0.6
LRRC28-213ENST00000559399 TENM2Q9NT68 2774 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 A0A0A6YYH2 397 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 A6NJ64 397 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 ZNF785A8K8V0 405 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 NDUFB8O95169 186 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 ATP6V1G2O95670 118 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 PPYP01298 95 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 IGHV3-23P01764 117 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 CD7P09564 240 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 CLEC2LP0C7M8 214 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 DEFA4P12838 97 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 HIST1H1BP16401 226 aaKnown RBP11.27□□□□□ -0.61
LRRC28-213ENST00000559399 CTRB1P17538 263 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 ARL3P36405 182 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 TIMM50Q3ZCQ8 353 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 IDNKQ5T6J7 187 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 CTRB2Q6GPI1 263 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 OR4A47Q6IF82 309 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 CLEC19AQ6UXS0 136 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 GPHB5Q86YW7 130 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 SPAG16Q8N0X2 631 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 GVQW1Q8N7I0 195 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 ZBTB34Q8NCN2 500 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 OR5H6Q8NGV6 325 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 EEF1AKMT3Q96AZ1 226 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 HIPK2Q9H2X6 1198 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 HRASLSQ9HDD0 168 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 BET1LQ9NYM9 111 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 S4R3C0 116 aa11.27□□□□□ -0.61
LRRC28-213ENST00000559399 LOC100506127A0A0U1RQW1 187 aa11.26□□□□□ -0.61
LRRC28-213ENST00000559399 RBFOX2O43251 390 aaKnown RBP eCLIP11.26□□□□□ -0.61
LRRC28-213ENST00000559399 PTHLHP12272 177 aa11.26□□□□□ -0.61
LRRC28-213ENST00000559399 EDN2P20800 178 aa11.26□□□□□ -0.61
LRRC28-213ENST00000559399 CATR1Q13166 79 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms