RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 PRR20EP86478 221 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 PRR20CP86479 221 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 PRR20DP86480 221 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 PRR20BP86481 221 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 PRR20AP86496 221 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 OR4A47Q6IF82 309 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 DHRS11Q6UWP2 260 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 SSX9Q7RTT3 188 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 SNX29P2Q8IUI4 249 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 OR51H1Q8NH63 302 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 AP3S1Q92572 193 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 BORCS5Q969J3 196 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 OR2A7Q96R45 310 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 PRR25Q96S07 402 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 SPIN2AQ99865 258 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 SPIN2BQ9BPZ2 258 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 BET1LQ9NYM9 111 aa8.42□□□□□ -1.06
SPG11-216ENST00000559347 A0A1B0GW64 132 aa8.41□□□□□ -1.06
SPG11-216ENST00000559347 HPRT1P00492 218 aa8.41□□□□□ -1.06
SPG11-216ENST00000559347 RLN1P04808 185 aa8.41□□□□□ -1.06
SPG11-216ENST00000559347 ZNF182P17025 639 aaPredicted RBP8.41□□□□□ -1.06
SPG11-216ENST00000559347 HLA-DMAP28067 261 aa8.41□□□□□ -1.06
SPG11-216ENST00000559347 GNRHRP30968 328 aa8.41□□□□□ -1.06
SPG11-216ENST00000559347 RCVRNP35243 200 aa8.41□□□□□ -1.06
SPG11-216ENST00000559347 MAS1LP35410 378 aa8.41□□□□□ -1.06
SPG11-216ENST00000559347 ECI1P42126 302 aa8.41□□□□□ -1.06
SPG11-216ENST00000559347 RPL27AP46776 148 aaKnown RBP8.41□□□□□ -1.06
SPG11-216ENST00000559347 TAS2R31P59538 309 aa8.41□□□□□ -1.06
SPG11-216ENST00000559347 ZNF45Q02386 682 aa8.41□□□□□ -1.06
SPG11-216ENST00000559347 DCTN2Q13561 401 aaKnown RBP8.41□□□□□ -1.06
SPG11-216ENST00000559347 POU2AF1Q16633 256 aa8.41□□□□□ -1.06
SPG11-216ENST00000559347 AADACL3Q5VUY0 350 aa8.41□□□□□ -1.06
SPG11-216ENST00000559347 ZNF343Q6P1L6 599 aa8.41□□□□□ -1.06
SPG11-216ENST00000559347 ACSM6Q6P461 480 aa8.41□□□□□ -1.06
SPG11-216ENST00000559347 MZT2AQ6P582 158 aa8.41□□□□□ -1.06
SPG11-216ENST00000559347 GPR141Q7Z602 305 aa8.41□□□□□ -1.06
SPG11-216ENST00000559347 ZNF429Q86V71 674 aa8.41□□□□□ -1.06
SPG11-216ENST00000559347 LYSMD2Q8IV50 215 aa8.41□□□□□ -1.06
SPG11-216ENST00000559347 USMG5Q96IX5 58 aa8.41□□□□□ -1.06
SPG11-216ENST00000559347 COMMD9Q9P000 198 aa8.41□□□□□ -1.06
SPG11-216ENST00000559347 ZNF256Q9Y2P7 627 aaPredicted RBP8.41□□□□□ -1.06
SPG11-216ENST00000559347 SORL1Q92673 2214 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 TRBV9A0A0B4J1U6 114 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 ANKRD34BA5PLL1 514 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 HMX3A6NHT5 357 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 FAM223BA6NKX1 122 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 FAM25AB3EWG3 89 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 FAM25CB3EWG5 89 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 FAM25GB3EWG6 89 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 E7EUB6 86 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 S1PR2O95136 353 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 TRBV12-3P01733 135 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 PRH1P02810 166 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 IL6RP08887 468 aaPredicted RBP8.4□□□□□ -1.06
SPG11-216ENST00000559347 ZNF735P0CB33 412 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 NQO2P16083 231 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 ZP3P21754 424 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 RPL8P62917 257 aaKnown RBP8.4□□□□□ -1.06
SPG11-216ENST00000559347 RHOGP84095 191 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 SPCS2Q15005 226 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 DEFB121Q5J5C9 76 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 C19orf35Q6ZS72 473 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 FAM223AQ8IWN6 122 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 TTC9CQ8N5M4 171 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 OR4A5Q8NH83 315 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 B9D2Q9BPU9 175 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 PLEKHA2Q9HB19 425 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 RANGRFQ9HD47 186 aaPredicted RBP8.4□□□□□ -1.06
SPG11-216ENST00000559347 AKIP1Q9NQ31 210 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 ZNF257Q9Y2Q1 563 aa8.4□□□□□ -1.06
SPG11-216ENST00000559347 CGB1A6NKQ9 187 aa8.39□□□□□ -1.07
SPG11-216ENST00000559347 NPIPB5A8MRT5 1133 aa8.39□□□□□ -1.07
SPG11-216ENST00000559347 GPR31O00270 319 aa8.39□□□□□ -1.07
SPG11-216ENST00000559347 MYOD1P15172 320 aa8.39□□□□□ -1.07
SPG11-216ENST00000559347 HLA-GP17693 338 aa8.39□□□□□ -1.07
SPG11-216ENST00000559347 EXOSC2Q13868 293 aaKnown RBP8.39□□□□□ -1.07
SPG11-216ENST00000559347 RNASE12Q5GAN4 147 aaKnown RBP8.39□□□□□ -1.07
SPG11-216ENST00000559347 SLC25A42Q86VD7 318 aa8.39□□□□□ -1.07
SPG11-216ENST00000559347 LAX1Q8IWV1 398 aa8.39□□□□□ -1.07
SPG11-216ENST00000559347 OR6F1Q8NGZ6 308 aa8.39□□□□□ -1.07
SPG11-216ENST00000559347 CD300LFQ8TDQ1 290 aa8.39□□□□□ -1.07
SPG11-216ENST00000559347 FYTTD1Q96QD9 318 aaKnown RBP8.39□□□□□ -1.07
SPG11-216ENST00000559347 AIFM2Q9BRQ8 373 aa8.39□□□□□ -1.07
SPG11-216ENST00000559347 MIXL1Q9H2W2 232 aa8.39□□□□□ -1.07
SPG11-216ENST00000559347 HRASLSQ9HDD0 168 aa8.39□□□□□ -1.07
SPG11-216ENST00000559347 TMEM140Q9NV12 185 aa8.39□□□□□ -1.07
SPG11-216ENST00000559347 EXTL2Q9UBQ6 330 aa8.39□□□□□ -1.07
SPG11-216ENST00000559347 PEF1Q9UBV8 284 aaKnown RBP8.39□□□□□ -1.07
SPG11-216ENST00000559347 LSM4Q9Y4Z0 139 aaKnown RBP8.39□□□□□ -1.07
SPG11-216ENST00000559347 TRAV3A0A0B4J244 114 aa8.38□□□□□ -1.07
SPG11-216ENST00000559347 MARCH11A6NNE9 402 aa8.38□□□□□ -1.07
SPG11-216ENST00000559347 LCE2BO14633 110 aa8.38□□□□□ -1.07
SPG11-216ENST00000559347 PGLYRP1O75594 196 aaPredicted RBP8.38□□□□□ -1.07
SPG11-216ENST00000559347 FGF2P09038 288 aa8.38□□□□□ -1.07
SPG11-216ENST00000559347 AREGP15514 252 aa8.38□□□□□ -1.07
SPG11-216ENST00000559347 F2RP25116 425 aa8.38□□□□□ -1.07
SPG11-216ENST00000559347 TSPAN5P62079 268 aa8.38□□□□□ -1.07
SPG11-216ENST00000559347 CD69Q07108 199 aa8.38□□□□□ -1.07
SPG11-216ENST00000559347 VAX1Q5SQQ9 334 aa8.38□□□□□ -1.07
SPG11-216ENST00000559347 CLVS1Q8IUQ0 354 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms