RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 CD83Q01151 205 aa11.91□□□□□ -0.5
VPS18-202ENST00000558474 RELBQ01201 579 aa11.91□□□□□ -0.5
VPS18-202ENST00000558474 DEFB112Q30KQ8 113 aa11.91□□□□□ -0.5
VPS18-202ENST00000558474 PDLIM3Q53GG5 364 aaPredicted RBP11.91□□□□□ -0.5
VPS18-202ENST00000558474 Q6ZRM9 215 aa11.91□□□□□ -0.5
VPS18-202ENST00000558474 OR1S1Q8NH92 325 aa11.91□□□□□ -0.5
VPS18-202ENST00000558474 PIFOQ8TCI5 191 aa11.91□□□□□ -0.5
VPS18-202ENST00000558474 CACNG5Q9UF02 275 aa11.91□□□□□ -0.5
VPS18-202ENST00000558474 CDC42EP3Q9UKI2 254 aa11.91□□□□□ -0.5
VPS18-202ENST00000558474 FOXA2Q9Y261 457 aaPredicted RBP11.91□□□□□ -0.5
VPS18-202ENST00000558474 ZNF257Q9Y2Q1 563 aa11.91□□□□□ -0.5
VPS18-202ENST00000558474 ZNF469Q96JG9 3925 aaPredicted RBP11.91□□□□□ -0.5
VPS18-202ENST00000558474 TEX15Q9BXT5 2789 aa11.9□□□□□ -0.5
VPS18-202ENST00000558474 OTOGQ6ZRI0 2925 aa11.9□□□□□ -0.5
VPS18-202ENST00000558474 C15orf61A6NNL5 157 aa11.9□□□□□ -0.5
VPS18-202ENST00000558474 RRHO14718 337 aa11.9□□□□□ -0.5
VPS18-202ENST00000558474 OR9G9P0C7N8 305 aa11.9□□□□□ -0.5
VPS18-202ENST00000558474 NKX2-1P43699 371 aaPredicted RBP11.9□□□□□ -0.5
VPS18-202ENST00000558474 ID3Q02535 119 aa11.9□□□□□ -0.5
VPS18-202ENST00000558474 MMDQ15546 238 aa11.9□□□□□ -0.5
VPS18-202ENST00000558474 Q6YL49 198 aa11.9□□□□□ -0.5
VPS18-202ENST00000558474 SSX9Q7RTT3 188 aa11.9□□□□□ -0.5
VPS18-202ENST00000558474 MMD2Q8IY49 270 aa11.9□□□□□ -0.5
VPS18-202ENST00000558474 VKORC1L1Q8N0U8 176 aa11.9□□□□□ -0.5
VPS18-202ENST00000558474 RBM14Q96PK6 669 aaKnown RBP11.9□□□□□ -0.5
VPS18-202ENST00000558474 RANGRFQ9HD47 186 aaPredicted RBP11.9□□□□□ -0.5
VPS18-202ENST00000558474 TMEM14BQ9NUH8 114 aa11.9□□□□□ -0.5
VPS18-202ENST00000558474 GSKIPQ9P0R6 139 aa11.9□□□□□ -0.5
VPS18-202ENST00000558474 TCF19Q9Y242 345 aa11.9□□□□□ -0.5
VPS18-202ENST00000558474 SIGLEC9Q9Y336 463 aa11.9□□□□□ -0.5
VPS18-202ENST00000558474 M0QZK8 103 aa11.89□□□□□ -0.51
VPS18-202ENST00000558474 ST8SIA3O43173 380 aa11.89□□□□□ -0.51
VPS18-202ENST00000558474 FGF16O43320 207 aa11.89□□□□□ -0.51
VPS18-202ENST00000558474 SLC25A17O43808 307 aa11.89□□□□□ -0.51
VPS18-202ENST00000558474 MED6O75586 246 aa11.89□□□□□ -0.51
VPS18-202ENST00000558474 OR2F2O95006 317 aa11.89□□□□□ -0.51
VPS18-202ENST00000558474 PSMB6P28072 239 aa11.89□□□□□ -0.51
VPS18-202ENST00000558474 IER3P46695 156 aa11.89□□□□□ -0.51
VPS18-202ENST00000558474 RPL8P62917 257 aaKnown RBP11.89□□□□□ -0.51
VPS18-202ENST00000558474 CLEC9AQ6UXN8 241 aa11.89□□□□□ -0.51
VPS18-202ENST00000558474 PPP1R27Q86WC6 154 aa11.89□□□□□ -0.51
VPS18-202ENST00000558474 BCL6BQ8N143 479 aaPredicted RBP11.89□□□□□ -0.51
VPS18-202ENST00000558474 TMEM86BQ8N661 226 aa11.89□□□□□ -0.51
VPS18-202ENST00000558474 OR5B3Q8NH48 314 aa11.89□□□□□ -0.51
VPS18-202ENST00000558474 PPP1R1CQ8WVI7 109 aa11.89□□□□□ -0.51
VPS18-202ENST00000558474 ZDHHC16Q969W1 377 aa11.89□□□□□ -0.51
VPS18-202ENST00000558474 RITA1Q96K30 269 aa11.89□□□□□ -0.51
VPS18-202ENST00000558474 CHIAQ9BZP6 476 aa11.89□□□□□ -0.51
VPS18-202ENST00000558474 PLSCR3Q9NRY6 295 aa11.89□□□□□ -0.51
VPS18-202ENST00000558474 METTL1Q9UBP6 276 aaKnown RBP11.89□□□□□ -0.51
VPS18-202ENST00000558474 HSPB7Q9UBY9 170 aa11.89□□□□□ -0.51
VPS18-202ENST00000558474 POMT1Q9Y6A1 747 aa11.89□□□□□ -0.51
VPS18-202ENST00000558474 ZANQ9Y493 2812 aa11.89□□□□□ -0.51
VPS18-202ENST00000558474 A6NDX4 124 aa11.88□□□□□ -0.51
VPS18-202ENST00000558474 BTBD17A6NE02 478 aa11.88□□□□□ -0.51
VPS18-202ENST00000558474 H3BUX3 64 aa11.88□□□□□ -0.51
VPS18-202ENST00000558474 RBMXL2O75526 392 aaKnown RBP11.88□□□□□ -0.51
VPS18-202ENST00000558474 RLN2P04090 185 aa11.88□□□□□ -0.51
VPS18-202ENST00000558474 PAX6P26367 422 aa11.88□□□□□ -0.51
VPS18-202ENST00000558474 F2RL1P55085 397 aa11.88□□□□□ -0.51
VPS18-202ENST00000558474 SPCS3P61009 180 aa11.88□□□□□ -0.51
VPS18-202ENST00000558474 PRSS8Q16651 343 aa11.88□□□□□ -0.51
VPS18-202ENST00000558474 C5orf64Q2M2E5 130 aa11.88□□□□□ -0.51
VPS18-202ENST00000558474 FAM71E2Q8N5Q1 922 aa11.88□□□□□ -0.51
VPS18-202ENST00000558474 OR2T35Q8NGX2 323 aa11.88□□□□□ -0.51
VPS18-202ENST00000558474 SSMEM1Q8WWF3 244 aa11.88□□□□□ -0.51
VPS18-202ENST00000558474 MOB4Q9Y3A3 225 aa11.88□□□□□ -0.51
VPS18-202ENST00000558474 MPC2O95563 127 aa11.87□□□□□ -0.51
VPS18-202ENST00000558474 MBPP02686 304 aaPredicted RBP11.87□□□□□ -0.51
VPS18-202ENST00000558474 C1QBP02746 253 aa11.87□□□□□ -0.51
VPS18-202ENST00000558474 CD24P25063 80 aa11.87□□□□□ -0.51
VPS18-202ENST00000558474 CNTFRP26992 372 aa11.87□□□□□ -0.51
VPS18-202ENST00000558474 HSPE1P61604 102 aaKnown RBP11.87□□□□□ -0.51
VPS18-202ENST00000558474 TNFRSF9Q07011 255 aa11.87□□□□□ -0.51
VPS18-202ENST00000558474 RAB32Q13637 225 aa11.87□□□□□ -0.51
VPS18-202ENST00000558474 HNF4GQ14541 408 aa11.87□□□□□ -0.51
VPS18-202ENST00000558474 PLGLAQ15195 96 aa11.87□□□□□ -0.51
VPS18-202ENST00000558474 IZUMO4Q1ZYL8 232 aa11.87□□□□□ -0.51
VPS18-202ENST00000558474 SLC25A33Q9BSK2 321 aa11.87□□□□□ -0.51
VPS18-202ENST00000558474 ZNF430Q9H8G1 570 aaPredicted RBP11.87□□□□□ -0.51
VPS18-202ENST00000558474 FLNBO75369 2602 aaKnown RBP11.86□□□□□ -0.51
VPS18-202ENST00000558474 TRAV3A0A0B4J244 114 aa11.86□□□□□ -0.51
VPS18-202ENST00000558474 NCBP2LA6PVI3 153 aaKnown RBP11.86□□□□□ -0.51
VPS18-202ENST00000558474 INS-IGF2F8WCM5 200 aa11.86□□□□□ -0.51
VPS18-202ENST00000558474 WRBO00258 174 aa11.86□□□□□ -0.51
VPS18-202ENST00000558474 SYNGR2O43760 224 aa11.86□□□□□ -0.51
VPS18-202ENST00000558474 HLA-DRB1P01911 266 aa11.86□□□□□ -0.51
VPS18-202ENST00000558474 SLC25A4P12235 298 aa11.86□□□□□ -0.51
VPS18-202ENST00000558474 LYL1P12980 280 aa11.86□□□□□ -0.51
VPS18-202ENST00000558474 PVALBP20472 110 aaPredicted RBP11.86□□□□□ -0.51
VPS18-202ENST00000558474 MRGPRG-AS1Q2M3A8 158 aa11.86□□□□□ -0.51
VPS18-202ENST00000558474 PRSS54Q6PEW0 395 aa11.86□□□□□ -0.51
VPS18-202ENST00000558474 Q8N9W7 124 aa11.86□□□□□ -0.51
VPS18-202ENST00000558474 OR1L8Q8NGR8 309 aa11.86□□□□□ -0.51
VPS18-202ENST00000558474 THAP6Q8TBB0 222 aa11.86□□□□□ -0.51
VPS18-202ENST00000558474 ZNF48Q96MX3 618 aaPredicted RBP11.86□□□□□ -0.51
VPS18-202ENST00000558474 CIB3Q96Q77 187 aaPredicted RBP11.86□□□□□ -0.51
VPS18-202ENST00000558474 RAB40CQ96S21 281 aa11.86□□□□□ -0.51
VPS18-202ENST00000558474 RASL11BQ9BPW5 248 aa11.86□□□□□ -0.51
VPS18-202ENST00000558474 SRSF8Q9BRL6 282 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms