RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 NQO2P16083 231 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 F2RP25116 425 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 BRWD1-AS2P59051 145 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 ZNF616Q08AN1 781 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 TNXAQ16473 311 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 POU2AF1Q16633 256 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 BEAN1Q3B7T3 259 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 OXLD1Q5BKU9 147 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 RNASE10Q5GAN6 216 aaKnown RBP6.6□□□□□ -1.35
TPM1-213ENST00000558400 AADACL3Q5VUY0 350 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 SLC38A6Q8IZM9 456 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 PUSL1Q8N0Z8 303 aaKnown RBP6.6□□□□□ -1.35
TPM1-213ENST00000558400 ARRDC1Q8N5I2 433 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 TMEM229BQ8NBD8 167 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 OR5T1Q8NG75 326 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 OR11H1Q8NG94 326 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 OR1N2Q8NGR9 330 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 OR52I2Q8NH67 350 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 TMEM167AQ8TBQ9 72 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 ISOC1Q96CN7 298 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 DGCR14Q96DF8 476 aaKnown RBP6.6□□□□□ -1.35
TPM1-213ENST00000558400 RAX2Q96IS3 184 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 USMG5Q96IX5 58 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 PHB2Q99623 299 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 FAM103A1Q9BTL3 118 aaKnown RBP6.6□□□□□ -1.35
TPM1-213ENST00000558400 ZNF430Q9H8G1 570 aaPredicted RBP6.6□□□□□ -1.35
TPM1-213ENST00000558400 FAM212BQ9NTI7 297 aaPredicted RBP6.6□□□□□ -1.35
TPM1-213ENST00000558400 BET1LQ9NYM9 111 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 KLK11Q9UBX7 282 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 RSL24D1Q9UHA3 163 aaKnown RBP6.6□□□□□ -1.35
TPM1-213ENST00000558400 PLXNB1O43157 2135 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 C13orf42A0A1B0GVH6 325 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 CCDC160A6NGH7 325 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 MPPED1O15442 326 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 SOX15O60248 233 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 KBTBD11O94819 623 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 DHFRP00374 187 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 TRGV3P03979 118 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 HSPB1P04792 205 aaKnown RBP6.59□□□□□ -1.35
TPM1-213ENST00000558400 OR9G9P0C7N8 305 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 INSL3P51460 131 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 TPPP2P59282 170 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 TAS2R19P59542 299 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 ERVK-16P61578 105 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 RPL8P62917 257 aaKnown RBP6.59□□□□□ -1.35
TPM1-213ENST00000558400 OR2B11Q5JQS5 317 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 FAM209BQ5JX69 171 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 ETV3LQ6ZN32 361 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 IDO2Q6ZQW0 420 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 C18orf65Q6ZTR6 163 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 C1QL4Q86Z23 238 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 TTC9CQ8N5M4 171 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 OR51H1Q8NH63 302 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 TERB2Q8NHR7 220 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 MCFD2Q8NI22 146 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 ZFAND1Q8TCF1 268 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 SRSF12Q8WXF0 261 aaKnown RBP6.59□□□□□ -1.35
TPM1-213ENST00000558400 ZNF486Q96H40 463 aaPredicted RBP6.59□□□□□ -1.35
TPM1-213ENST00000558400 MS4A10Q96PG2 267 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 C6orf62Q9GZU0 229 aaPredicted RBP6.59□□□□□ -1.35
TPM1-213ENST00000558400 MIXL1Q9H2W2 232 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 HRASLSQ9HDD0 168 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 TPSG1Q9NRR2 321 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 COMMD9Q9P000 198 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 CEPT1Q9Y6K0 416 aa6.59□□□□□ -1.35
TPM1-213ENST00000558400 FABP12A6NFH5 140 aa6.58□□□□□ -1.36
TPM1-213ENST00000558400 RAMP3O60896 148 aa6.58□□□□□ -1.36
TPM1-213ENST00000558400 RAB3DO95716 219 aa6.58□□□□□ -1.36
TPM1-213ENST00000558400 CD74P04233 296 aa6.58□□□□□ -1.36
TPM1-213ENST00000558400 CD3DP04234 171 aa6.58□□□□□ -1.36
TPM1-213ENST00000558400 LGALS1P09382 135 aaKnown RBP6.58□□□□□ -1.36
TPM1-213ENST00000558400 TNFSF8P32971 234 aa6.58□□□□□ -1.36
TPM1-213ENST00000558400 S100A5P33763 92 aa6.58□□□□□ -1.36
TPM1-213ENST00000558400 ECI1P42126 302 aa6.58□□□□□ -1.36
TPM1-213ENST00000558400 RPL27AP46776 148 aaKnown RBP6.58□□□□□ -1.36
TPM1-213ENST00000558400 RAB25P57735 213 aa6.58□□□□□ -1.36
TPM1-213ENST00000558400 SSBP2P81877 361 aaPredicted RBP6.58□□□□□ -1.36
TPM1-213ENST00000558400 FHL3Q13643 280 aa6.58□□□□□ -1.36
TPM1-213ENST00000558400 IL18Q14116 193 aa6.58□□□□□ -1.36
TPM1-213ENST00000558400 MEF2DQ14814 521 aa6.58□□□□□ -1.36
TPM1-213ENST00000558400 MRGPRG-AS1Q2M3A8 158 aa6.58□□□□□ -1.36
TPM1-213ENST00000558400 C9orf66Q5T8R8 295 aa6.58□□□□□ -1.36
TPM1-213ENST00000558400 THOC7Q6I9Y2 204 aaKnown RBP6.58□□□□□ -1.36
TPM1-213ENST00000558400 OR4A47Q6IF82 309 aa6.58□□□□□ -1.36
TPM1-213ENST00000558400 LAX1Q8IWV1 398 aa6.58□□□□□ -1.36
TPM1-213ENST00000558400 VKORC1L1Q8N0U8 176 aa6.58□□□□□ -1.36
TPM1-213ENST00000558400 DMBX1Q8NFW5 382 aa6.58□□□□□ -1.36
TPM1-213ENST00000558400 SRSF8Q9BRL6 282 aaKnown RBP6.58□□□□□ -1.36
TPM1-213ENST00000558400 RSRP1Q9BUV0 290 aa6.58□□□□□ -1.36
TPM1-213ENST00000558400 TINAGL1Q9GZM7 467 aaPredicted RBP6.58□□□□□ -1.36
TPM1-213ENST00000558400 SLIRPQ9GZT3 109 aaKnown RBP6.58□□□□□ -1.36
TPM1-213ENST00000558400 NXF2Q9GZY0 626 aaKnown RBP6.58□□□□□ -1.36
TPM1-213ENST00000558400 RANGRFQ9HD47 186 aaPredicted RBP6.58□□□□□ -1.36
TPM1-213ENST00000558400 SLC2A9Q9NRM0 540 aa6.58□□□□□ -1.36
TPM1-213ENST00000558400 COA4Q9NYJ1 87 aa6.58□□□□□ -1.36
TPM1-213ENST00000558400 FKBP11Q9NYL4 201 aa6.58□□□□□ -1.36
TPM1-213ENST00000558400 NDUFA13Q9P0J0 144 aa6.58□□□□□ -1.36
TPM1-213ENST00000558400 DPPA5A6NC42 116 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 FAM223BA6NKX1 122 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 LINC01619G3V211 115 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms