RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 UPK2O00526 184 aa13.5□□□□□ -0.25
SNX1-203ENST00000558040 RRHO14718 337 aa13.5□□□□□ -0.25
SNX1-203ENST00000558040 PITX3O75364 302 aa13.5□□□□□ -0.25
SNX1-203ENST00000558040 SCGB1D2O95969 90 aa13.5□□□□□ -0.25
SNX1-203ENST00000558040 FGF2P09038 288 aa13.5□□□□□ -0.25
SNX1-203ENST00000558040 PET100P0DJ07 73 aa13.5□□□□□ -0.25
SNX1-203ENST00000558040 NKX2-1P43699 371 aaPredicted RBP13.5□□□□□ -0.25
SNX1-203ENST00000558040 RELBQ01201 579 aa13.5□□□□□ -0.25
SNX1-203ENST00000558040 PLGLAQ15195 96 aa13.5□□□□□ -0.25
SNX1-203ENST00000558040 CLEC9AQ6UXN8 241 aa13.5□□□□□ -0.25
SNX1-203ENST00000558040 TMEM167AQ8TBQ9 72 aa13.5□□□□□ -0.25
SNX1-203ENST00000558040 PPP1R1CQ8WVI7 109 aa13.5□□□□□ -0.25
SNX1-203ENST00000558040 C22orf15Q8WYQ4 148 aa13.5□□□□□ -0.25
SNX1-203ENST00000558040 FKBP11Q9NYL4 201 aa13.5□□□□□ -0.25
SNX1-203ENST00000558040 METTL1Q9UBP6 276 aaKnown RBP13.5□□□□□ -0.25
SNX1-203ENST00000558040 PITPNC1Q9UKF7 332 aa13.5□□□□□ -0.25
SNX1-203ENST00000558040 SOX21Q9Y651 276 aaPredicted RBP13.5□□□□□ -0.25
SNX1-203ENST00000558040 CSMD1Q96PZ7 3565 aa13.5□□□□□ -0.25
SNX1-203ENST00000558040 BTBD17A6NE02 478 aa13.49□□□□□ -0.25
SNX1-203ENST00000558040 C15orf61A6NNL5 157 aa13.49□□□□□ -0.25
SNX1-203ENST00000558040 NDUFA3O95167 84 aa13.49□□□□□ -0.25
SNX1-203ENST00000558040 IL6RP08887 468 aaPredicted RBP13.49□□□□□ -0.25
SNX1-203ENST00000558040 CNTFRP26992 372 aa13.49□□□□□ -0.25
SNX1-203ENST00000558040 PSMB6P28072 239 aa13.49□□□□□ -0.25
SNX1-203ENST00000558040 OR2B8PP59922 312 aa13.49□□□□□ -0.25
SNX1-203ENST00000558040 S100A10P60903 97 aa13.49□□□□□ -0.25
SNX1-203ENST00000558040 RPL8P62917 257 aaKnown RBP13.49□□□□□ -0.25
SNX1-203ENST00000558040 IL15RAQ13261 267 aa13.49□□□□□ -0.25
SNX1-203ENST00000558040 IL17RELQ6ZVW7 336 aa13.49□□□□□ -0.25
SNX1-203ENST00000558040 ZNF429Q86V71 674 aa13.49□□□□□ -0.25
SNX1-203ENST00000558040 SMR3AQ99954 134 aa13.49□□□□□ -0.25
SNX1-203ENST00000558040 FOXA2Q9Y261 457 aaPredicted RBP13.49□□□□□ -0.25
SNX1-203ENST00000558040 NSG2Q9Y328 171 aa13.49□□□□□ -0.25
SNX1-203ENST00000558040 SIGLEC9Q9Y336 463 aa13.49□□□□□ -0.25
SNX1-203ENST00000558040 MDFIC2A0A1B0GVS7 189 aa13.48□□□□□ -0.25
SNX1-203ENST00000558040 NCBP2LA6PVI3 153 aaKnown RBP13.48□□□□□ -0.25
SNX1-203ENST00000558040 H3BUX3 64 aa13.48□□□□□ -0.25
SNX1-203ENST00000558040 WRBO00258 174 aa13.48□□□□□ -0.25
SNX1-203ENST00000558040 ST8SIA3O43173 380 aa13.48□□□□□ -0.25
SNX1-203ENST00000558040 MED6O75586 246 aa13.48□□□□□ -0.25
SNX1-203ENST00000558040 RLN2P04090 185 aa13.48□□□□□ -0.25
SNX1-203ENST00000558040 CRYGBP07316 175 aa13.48□□□□□ -0.25
SNX1-203ENST00000558040 F2RL1P55085 397 aa13.48□□□□□ -0.25
SNX1-203ENST00000558040 LRRC37A5PQ49AS3 106 aa13.48□□□□□ -0.25
SNX1-203ENST00000558040 AARDQ4LEZ3 155 aa13.48□□□□□ -0.25
SNX1-203ENST00000558040 PPP1R27Q86WC6 154 aa13.48□□□□□ -0.25
SNX1-203ENST00000558040 MMD2Q8IY49 270 aa13.48□□□□□ -0.25
SNX1-203ENST00000558040 OR5R1Q8NH85 324 aa13.48□□□□□ -0.25
SNX1-203ENST00000558040 PPP1R14BQ96C90 147 aa13.48□□□□□ -0.25
SNX1-203ENST00000558040 WDR89Q96FK6 387 aaPredicted RBP13.48□□□□□ -0.25
SNX1-203ENST00000558040 TMEM14BQ9NUH8 114 aa13.48□□□□□ -0.25
SNX1-203ENST00000558040 TCF19Q9Y242 345 aa13.48□□□□□ -0.25
SNX1-203ENST00000558040 POMT1Q9Y6A1 747 aa13.48□□□□□ -0.25
SNX1-203ENST00000558040 FLNAP21333 2647 aaKnown RBP13.47□□□□□ -0.25
SNX1-203ENST00000558040 TRAV3A0A0B4J244 114 aa13.47□□□□□ -0.25
SNX1-203ENST00000558040 ACTL6BO94805 426 aa13.47□□□□□ -0.25
SNX1-203ENST00000558040 OR2F2O95006 317 aa13.47□□□□□ -0.25
SNX1-203ENST00000558040 IFNA17P01571 189 aa13.47□□□□□ -0.25
SNX1-203ENST00000558040 MBPP02686 304 aaPredicted RBP13.47□□□□□ -0.25
SNX1-203ENST00000558040 MAS1LP35410 378 aa13.47□□□□□ -0.25
SNX1-203ENST00000558040 ID3Q02535 119 aa13.47□□□□□ -0.25
SNX1-203ENST00000558040 TNFRSF9Q07011 255 aa13.47□□□□□ -0.25
SNX1-203ENST00000558040 RAB32Q13637 225 aa13.47□□□□□ -0.25
SNX1-203ENST00000558040 C5orf64Q2M2E5 130 aa13.47□□□□□ -0.25
SNX1-203ENST00000558040 CXorf66Q5JRM2 361 aaPredicted RBP13.47□□□□□ -0.25
SNX1-203ENST00000558040 Q6YL49 198 aa13.47□□□□□ -0.25
SNX1-203ENST00000558040 OR5B3Q8NH48 314 aa13.47□□□□□ -0.25
SNX1-203ENST00000558040 OR52E5Q8NH55 327 aa13.47□□□□□ -0.25
SNX1-203ENST00000558040 THAP6Q8TBB0 222 aa13.47□□□□□ -0.25
SNX1-203ENST00000558040 PIFOQ8TCI5 191 aa13.47□□□□□ -0.25
SNX1-203ENST00000558040 RBM14Q96PK6 669 aaKnown RBP13.47□□□□□ -0.25
SNX1-203ENST00000558040 SLC25A33Q9BSK2 321 aa13.47□□□□□ -0.25
SNX1-203ENST00000558040 QTRT1Q9BXR0 403 aaKnown RBP13.47□□□□□ -0.25
SNX1-203ENST00000558040 COMMD5Q9GZQ3 224 aa13.47□□□□□ -0.25
SNX1-203ENST00000558040 FBXL15Q9H469 300 aa13.47□□□□□ -0.25
SNX1-203ENST00000558040 PRDM13Q9H4Q3 707 aa13.47□□□□□ -0.25
SNX1-203ENST00000558040 ZNF430Q9H8G1 570 aaPredicted RBP13.47□□□□□ -0.25
SNX1-203ENST00000558040 HSPB7Q9UBY9 170 aa13.47□□□□□ -0.25
SNX1-203ENST00000558040 CDC42EP3Q9UKI2 254 aa13.47□□□□□ -0.25
SNX1-203ENST00000558040 ZNF257Q9Y2Q1 563 aa13.47□□□□□ -0.25
SNX1-203ENST00000558040 MOB4Q9Y3A3 225 aa13.47□□□□□ -0.25
SNX1-203ENST00000558040 LSM5Q9Y4Y9 91 aaKnown RBP13.47□□□□□ -0.25
SNX1-203ENST00000558040 OR51B2Q9Y5P1 312 aa13.47□□□□□ -0.25
SNX1-203ENST00000558040 K7EPK0 472 aa13.46□□□□□ -0.25
SNX1-203ENST00000558040 NXPH3O95157 252 aa13.46□□□□□ -0.25
SNX1-203ENST00000558040 MPC2O95563 127 aa13.46□□□□□ -0.25
SNX1-203ENST00000558040 PVALBP20472 110 aaPredicted RBP13.46□□□□□ -0.25
SNX1-203ENST00000558040 IER3P46695 156 aa13.46□□□□□ -0.25
SNX1-203ENST00000558040 SPCS3P61009 180 aa13.46□□□□□ -0.25
SNX1-203ENST00000558040 CD300CQ08708 224 aa13.46□□□□□ -0.25
SNX1-203ENST00000558040 PRSS8Q16651 343 aa13.46□□□□□ -0.25
SNX1-203ENST00000558040 ZFP69Q49AA0 526 aa13.46□□□□□ -0.25
SNX1-203ENST00000558040 FBLN7Q53RD9 439 aa13.46□□□□□ -0.25
SNX1-203ENST00000558040 C16orf82Q7Z2V1 217 aa13.46□□□□□ -0.25
SNX1-203ENST00000558040 FAM71E2Q8N5Q1 922 aa13.46□□□□□ -0.25
SNX1-203ENST00000558040 SSMEM1Q8WWF3 244 aa13.46□□□□□ -0.25
SNX1-203ENST00000558040 TPSG1Q9NRR2 321 aa13.46□□□□□ -0.25
SNX1-203ENST00000558040 PLSCR3Q9NRY6 295 aa13.46□□□□□ -0.25
SNX1-203ENST00000558040 A6NDX4 124 aa13.45□□□□□ -0.26
SNX1-203ENST00000558040 SMLR1H3BR10 107 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms