RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 HAGHQ16775 308 aa11.11□□□□□ -0.63
SHMT2-235ENST00000557740 IDNKQ5T6J7 187 aa11.11□□□□□ -0.63
SHMT2-235ENST00000557740 ZNF773Q6PK81 442 aa11.11□□□□□ -0.63
SHMT2-235ENST00000557740 SSX9Q7RTT3 188 aa11.11□□□□□ -0.63
SHMT2-235ENST00000557740 PUSL1Q8N0Z8 303 aaKnown RBP11.11□□□□□ -0.63
SHMT2-235ENST00000557740 MFSD4AQ8N468 514 aa11.11□□□□□ -0.63
SHMT2-235ENST00000557740 TMEM167AQ8TBQ9 72 aa11.11□□□□□ -0.63
SHMT2-235ENST00000557740 SECTM1Q8WVN6 248 aa11.11□□□□□ -0.63
SHMT2-235ENST00000557740 KCTD12Q96CX2 325 aaKnown RBP11.11□□□□□ -0.63
SHMT2-235ENST00000557740 THAP7Q9BT49 309 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-235ENST00000557740 PPP5D1E7EU14 171 aa11.1□□□□□ -0.63
SHMT2-235ENST00000557740 TNFSF12O43508 249 aa11.1□□□□□ -0.63
SHMT2-235ENST00000557740 DHFRP00374 187 aa11.1□□□□□ -0.63
SHMT2-235ENST00000557740 CLEC2LP0C7M8 214 aa11.1□□□□□ -0.63
SHMT2-235ENST00000557740 FCGR2CP31995 323 aa11.1□□□□□ -0.63
SHMT2-235ENST00000557740 CD81P60033 236 aa11.1□□□□□ -0.63
SHMT2-235ENST00000557740 RPL8P62917 257 aaKnown RBP11.1□□□□□ -0.63
SHMT2-235ENST00000557740 EIF4EBP1Q13541 118 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-235ENST00000557740 CD300EQ496F6 205 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-235ENST00000557740 ZFAND6Q6FIF0 208 aa11.1□□□□□ -0.63
SHMT2-235ENST00000557740 C19orf35Q6ZS72 473 aa11.1□□□□□ -0.63
SHMT2-235ENST00000557740 OR13F1Q8NGS4 319 aa11.1□□□□□ -0.63
SHMT2-235ENST00000557740 SLC25A38Q96DW6 304 aa11.1□□□□□ -0.63
SHMT2-235ENST00000557740 SLC2A9Q9NRM0 540 aa11.1□□□□□ -0.63
SHMT2-235ENST00000557740 FBXL7Q9UJT9 491 aa11.1□□□□□ -0.63
SHMT2-235ENST00000557740 A0A0A6YYH2 397 aa11.09□□□□□ -0.63
SHMT2-235ENST00000557740 A6NJ64 397 aa11.09□□□□□ -0.63
SHMT2-235ENST00000557740 GGCTO75223 188 aaKnown RBP11.09□□□□□ -0.63
SHMT2-235ENST00000557740 TPPPO94811 219 aa11.09□□□□□ -0.63
SHMT2-235ENST00000557740 IFNA6P05013 189 aa11.09□□□□□ -0.63
SHMT2-235ENST00000557740 IL6RP08887 468 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-235ENST00000557740 MSMO1Q15800 293 aa11.09□□□□□ -0.63
SHMT2-235ENST00000557740 HOGA1Q86XE5 327 aa11.09□□□□□ -0.63
SHMT2-235ENST00000557740 LAX1Q8IWV1 398 aa11.09□□□□□ -0.63
SHMT2-235ENST00000557740 GVQW1Q8N7I0 195 aa11.09□□□□□ -0.63
SHMT2-235ENST00000557740 OR5H6Q8NGV6 325 aa11.09□□□□□ -0.63
SHMT2-235ENST00000557740 GPHA2Q96T91 129 aa11.09□□□□□ -0.63
SHMT2-235ENST00000557740 AIFM2Q9BRQ8 373 aa11.09□□□□□ -0.63
SHMT2-235ENST00000557740 RNF167Q9H6Y7 350 aa11.09□□□□□ -0.63
SHMT2-235ENST00000557740 PLEKHA3Q9HB20 300 aa11.09□□□□□ -0.63
SHMT2-235ENST00000557740 HRASLSQ9HDD0 168 aa11.09□□□□□ -0.63
SHMT2-235ENST00000557740 DIABLOQ9NR28 239 aa11.09□□□□□ -0.63
SHMT2-235ENST00000557740 CCL28Q9NRJ3 127 aa11.09□□□□□ -0.63
SHMT2-235ENST00000557740 SLC2A8Q9NY64 477 aa11.09□□□□□ -0.63
SHMT2-235ENST00000557740 HUWE1Q7Z6Z7 4374 aaKnown RBP11.09□□□□□ -0.63
SHMT2-235ENST00000557740 PPYP01298 95 aa11.08□□□□□ -0.64
SHMT2-235ENST00000557740 IGHV3-23P01764 117 aa11.08□□□□□ -0.64
SHMT2-235ENST00000557740 HLA-AP01891 365 aaKnown RBP11.08□□□□□ -0.64
SHMT2-235ENST00000557740 ZNF735P0CB33 412 aa11.08□□□□□ -0.64
SHMT2-235ENST00000557740 PTHLHP12272 177 aa11.08□□□□□ -0.64
SHMT2-235ENST00000557740 DEFA4P12838 97 aa11.08□□□□□ -0.64
SHMT2-235ENST00000557740 AREGP15514 252 aa11.08□□□□□ -0.64
SHMT2-235ENST00000557740 HLA-GP17693 338 aa11.08□□□□□ -0.64
SHMT2-235ENST00000557740 ARL3P36405 182 aa11.08□□□□□ -0.64
SHMT2-235ENST00000557740 MECP2P51608 486 aaKnown RBP11.08□□□□□ -0.64
SHMT2-235ENST00000557740 BRWD1-AS2P59051 145 aa11.08□□□□□ -0.64
SHMT2-235ENST00000557740 CATR1Q13166 79 aa11.08□□□□□ -0.64
SHMT2-235ENST00000557740 NEDD8Q15843 81 aa11.08□□□□□ -0.64
SHMT2-235ENST00000557740 GUCA2BQ16661 112 aa11.08□□□□□ -0.64
SHMT2-235ENST00000557740 TIMM50Q3ZCQ8 353 aa11.08□□□□□ -0.64
SHMT2-235ENST00000557740 SPAG16Q8N0X2 631 aa11.08□□□□□ -0.64
SHMT2-235ENST00000557740 ZBTB34Q8NCN2 500 aa11.08□□□□□ -0.64
SHMT2-235ENST00000557740 OR4A5Q8NH83 315 aa11.08□□□□□ -0.64
SHMT2-235ENST00000557740 EEF1AKMT3Q96AZ1 226 aa11.08□□□□□ -0.64
SHMT2-235ENST00000557740 NEURL2Q9BR09 285 aa11.08□□□□□ -0.64
SHMT2-235ENST00000557740 SLC5A7Q9GZV3 580 aa11.08□□□□□ -0.64
SHMT2-235ENST00000557740 EDA2RQ9HAV5 297 aa11.08□□□□□ -0.64
SHMT2-235ENST00000557740 CEPT1Q9Y6K0 416 aa11.08□□□□□ -0.64
SHMT2-235ENST00000557740 DNAH7Q8WXX0 4024 aa11.08□□□□□ -0.64
SHMT2-235ENST00000557740 A0A1B0GW64 132 aa11.07□□□□□ -0.64
SHMT2-235ENST00000557740 C2orf70A6NJV1 201 aa11.07□□□□□ -0.64
SHMT2-235ENST00000557740 E7EUB6 86 aa11.07□□□□□ -0.64
SHMT2-235ENST00000557740 RBFOX2O43251 390 aaKnown RBP eCLIP11.07□□□□□ -0.645e-15■■■■■ 33.3
SHMT2-235ENST00000557740 OR2C1O95371 312 aa11.07□□□□□ -0.64
SHMT2-235ENST00000557740 FCER2P06734 321 aa11.07□□□□□ -0.64
SHMT2-235ENST00000557740 FOLR2P14207 255 aa11.07□□□□□ -0.64
SHMT2-235ENST00000557740 HIST1H1BP16401 226 aaKnown RBP11.07□□□□□ -0.64
SHMT2-235ENST00000557740 PSMB6P28072 239 aa11.07□□□□□ -0.64
SHMT2-235ENST00000557740 CBX5P45973 191 aa11.07□□□□□ -0.64
SHMT2-235ENST00000557740 FXYD4P59646 89 aa11.07□□□□□ -0.64
SHMT2-235ENST00000557740 OR4A47Q6IF82 309 aa11.07□□□□□ -0.64
SHMT2-235ENST00000557740 CLEC19AQ6UXS0 136 aa11.07□□□□□ -0.64
SHMT2-235ENST00000557740 ADAMTSL5Q6ZMM2 481 aa11.07□□□□□ -0.64
SHMT2-235ENST00000557740 CCDC140Q96MF4 163 aa11.07□□□□□ -0.64
SHMT2-235ENST00000557740 AUNIPQ9H7T9 357 aa11.07□□□□□ -0.64
SHMT2-235ENST00000557740 BET1LQ9NYM9 111 aa11.07□□□□□ -0.64
SHMT2-235ENST00000557740 TECRQ9NZ01 308 aaKnown RBP11.07□□□□□ -0.64
SHMT2-235ENST00000557740 S4R3C0 116 aa11.07□□□□□ -0.64
SHMT2-235ENST00000557740 TENM2Q9NT68 2774 aa11.07□□□□□ -0.64
SHMT2-235ENST00000557740 LGALS9O00182 355 aa11.06□□□□□ -0.64
SHMT2-235ENST00000557740 SULT1C2O00338 296 aa11.06□□□□□ -0.64
SHMT2-235ENST00000557740 NDUFB8O95169 186 aa11.06□□□□□ -0.64
SHMT2-235ENST00000557740 REG1AP05451 166 aa11.06□□□□□ -0.64
SHMT2-235ENST00000557740 CRYGCP07315 174 aa11.06□□□□□ -0.64
SHMT2-235ENST00000557740 HERV-K104P61576 105 aa11.06□□□□□ -0.64
SHMT2-235ENST00000557740 DEFB114Q30KQ6 69 aa11.06□□□□□ -0.64
SHMT2-235ENST00000557740 FAM106AQ4KMX7 169 aa11.06□□□□□ -0.64
SHMT2-235ENST00000557740 TMEM17Q86X19 198 aa11.06□□□□□ -0.64
SHMT2-235ENST00000557740 FANCD2OSQ96PS1 177 aa11.06□□□□□ -0.64
SHMT2-235ENST00000557740 IFT46Q9NQC8 304 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms