RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 SMIM6P0DI80 62 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 GZMHP20718 246 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 UCP1P25874 307 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 MEOX2P50222 304 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 ACTBP60709 375 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 FGL1Q08830 312 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 UBE2V1Q13404 147 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 CT45A1Q5HYN5 189 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 PXT1Q8NFP0 134 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 OR10V1Q8NGI7 309 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 CT45A3Q8NHU0 189 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 IL17DQ8TAD2 202 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 CCDC107Q8WV48 283 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 TNFAIP8L1Q8WVP5 186 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 LINC00476Q8WZB0 136 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 MARC2Q969Z3 335 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 PINX1Q96BK5 328 aaKnown RBP4.46□□□□□ -1.7
VPS33B-207ENST00000557470 ZNF251Q9BRH9 671 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 CHRDL1Q9BU40 450 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 ALG8Q9BVK2 526 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 GNG12Q9UBI6 72 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 FBXO7Q9Y3I1 522 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 A0A087WXM4 84 aa4.45□□□□□ -1.7
VPS33B-207ENST00000557470 GABRPO00591 440 aa4.45□□□□□ -1.7
VPS33B-207ENST00000557470 GEMIN2O14893 280 aaKnown RBP4.45□□□□□ -1.7
VPS33B-207ENST00000557470 NBR2O15453 112 aa4.45□□□□□ -1.7
VPS33B-207ENST00000557470 ORC5O43913 435 aa4.45□□□□□ -1.7
VPS33B-207ENST00000557470 DFFBO76075 338 aa4.45□□□□□ -1.7
VPS33B-207ENST00000557470 OR7C1O76099 320 aaPredicted RBP4.45□□□□□ -1.7
VPS33B-207ENST00000557470 CDRT1O95170 752 aa4.45□□□□□ -1.7
VPS33B-207ENST00000557470 HSPB1P04792 205 aaKnown RBP4.45□□□□□ -1.7
VPS33B-207ENST00000557470 HTR1AP08908 422 aa4.45□□□□□ -1.7
VPS33B-207ENST00000557470 STAG3L2P0CL84 134 aa4.45□□□□□ -1.7
VPS33B-207ENST00000557470 EGR2P11161 476 aaPredicted RBP4.45□□□□□ -1.7
VPS33B-207ENST00000557470 HOXB6P17509 224 aaKnown RBP4.45□□□□□ -1.7
VPS33B-207ENST00000557470 CRIP2P52943 208 aaPredicted RBP4.45□□□□□ -1.7
VPS33B-207ENST00000557470 RBM11P57052 281 aaKnown RBP4.45□□□□□ -1.7
VPS33B-207ENST00000557470 SMCO1Q147U7 214 aa4.45□□□□□ -1.7
VPS33B-207ENST00000557470 RSU1Q15404 277 aa4.45□□□□□ -1.7
VPS33B-207ENST00000557470 C5orf64Q2M2E5 130 aa4.45□□□□□ -1.7
VPS33B-207ENST00000557470 ZFP69Q49AA0 526 aa4.45□□□□□ -1.7
VPS33B-207ENST00000557470 OR51A2Q8NGJ7 313 aa4.45□□□□□ -1.7
VPS33B-207ENST00000557470 OR5D14Q8NGL3 314 aa4.45□□□□□ -1.7
VPS33B-207ENST00000557470 OR1L1Q8NH94 360 aa4.45□□□□□ -1.7
VPS33B-207ENST00000557470 PHYHIPQ92561 330 aa4.45□□□□□ -1.7
VPS33B-207ENST00000557470 FLYWCH2Q96CP2 140 aaKnown RBP4.45□□□□□ -1.7
VPS33B-207ENST00000557470 PELI1Q96FA3 418 aa4.45□□□□□ -1.7
VPS33B-207ENST00000557470 GPER1Q99527 375 aa4.45□□□□□ -1.7
VPS33B-207ENST00000557470 GFI1Q99684 422 aa4.45□□□□□ -1.7
VPS33B-207ENST00000557470 SEC22CQ9BRL7 303 aa4.45□□□□□ -1.7
VPS33B-207ENST00000557470 THAP7Q9BT49 309 aaPredicted RBP4.45□□□□□ -1.7
VPS33B-207ENST00000557470 TMED9Q9BVK6 235 aa4.45□□□□□ -1.7
VPS33B-207ENST00000557470 MRPL20Q9BYC9 149 aaKnown RBP4.45□□□□□ -1.7
VPS33B-207ENST00000557470 HIPK2Q9H2X6 1198 aa4.45□□□□□ -1.7
VPS33B-207ENST00000557470 TUBA4BQ9H853 241 aa4.45□□□□□ -1.7
VPS33B-207ENST00000557470 ST3GAL6Q9Y274 331 aa4.45□□□□□ -1.7
VPS33B-207ENST00000557470 RYR1P21817 5038 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 TRAV26-1A0A087WT03 109 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 A0A1W2PPK0 400 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 DAPL1A0PJW8 107 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 LINC00862A6NCI5 91 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 J3QLW9 94 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 J3QRE1 110 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 AIPO00170 330 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 SPINT2O43291 252 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 NDUFA3O95167 84 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 RAB3DO95716 219 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 LY6G6CO95867 125 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 PTTG1O95997 202 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 HBZP02008 142 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 MT-ND4P03905 459 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 CDK1P06493 297 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 ZNF19P17023 458 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 SRMP19623 302 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 POLR2IP36954 125 aaKnown RBP4.44□□□□□ -1.7
VPS33B-207ENST00000557470 SERPINB10P48595 397 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 TMBIM6P55061 237 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 TPPP2P59282 170 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 CX3CL1P78423 397 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 RAB40BQ12829 278 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 GAGE2BQ13066 116 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 GNMTQ14749 295 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 GAGE2EQ4V326 116 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 NHLRC3Q5JS37 347 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 ATAD3CQ5T2N8 411 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 ZNF660Q6AZW8 331 aaPredicted RBP4.44□□□□□ -1.7
VPS33B-207ENST00000557470 KDM4DQ6B0I6 523 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 GAGE2AQ6NT46 116 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 ASCL4Q6XD76 172 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 IL34Q6ZMJ4 242 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 ZNF497Q6ZNH5 498 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 GTSCR1Q86UQ5 136 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 ODF3L1Q8IXM7 274 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 TCTEX1D1Q8N7M0 179 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 NPBQ8NG41 125 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 OR5T1Q8NG75 326 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 KCNG3Q8TAE7 436 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 NEK7Q8TDX7 302 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 CPNE2Q96FN4 548 aaPredicted RBP4.44□□□□□ -1.7
VPS33B-207ENST00000557470 NABP2Q9BQ15 211 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms