RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 IGHV7-4-1A0A0J9YVY3 117 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 TEX48A0A1B0GUV7 120 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 E7EUB6 86 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 K7EMT4 169 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 NDUFA4O00483 81 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 DHFRP00374 187 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 CRYGCP07315 174 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 IL6RP08887 468 aaPredicted RBP6.52□□□□□ -1.37
NEDD1-211ENST00000557454 P0C879 139 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 HIST1H1BP16401 226 aaKnown RBP6.52□□□□□ -1.37
NEDD1-211ENST00000557454 ZNF93P35789 620 aaPredicted RBP6.52□□□□□ -1.37
NEDD1-211ENST00000557454 CEACAM6P40199 344 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 PLA2G7Q13093 441 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 IRF3Q14653 427 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 RTL8BQ17RB0 113 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 KLK9Q2XQG4 91 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 DDI2Q5TDH0 399 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 FAM90A2PQ658T7 463 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 CYP2R1Q6VVX0 501 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 SSX7Q7RTT5 188 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 GID4Q8IVV7 300 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 TMEM116Q8NCL8 245 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 CMTM3Q96MX0 182 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 TMEM70Q9BUB7 260 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 FNDC4Q9H6D8 234 aaPredicted RBP6.52□□□□□ -1.37
NEDD1-211ENST00000557454 ZNF556Q9HAH1 456 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 Q9N2K0 584 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 ZNF586Q9NXT0 402 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 KLK9Q9UKQ9 250 aa6.52□□□□□ -1.37
NEDD1-211ENST00000557454 TMEM189A5PLL7 270 aa6.51□□□□□ -1.37
NEDD1-211ENST00000557454 DNASE2O00115 360 aaPredicted RBP6.51□□□□□ -1.37
NEDD1-211ENST00000557454 CREBL2O60519 120 aaPredicted RBP6.51□□□□□ -1.37
NEDD1-211ENST00000557454 CRYZL1O95825 349 aa6.51□□□□□ -1.37
NEDD1-211ENST00000557454 DEFA4P12838 97 aa6.51□□□□□ -1.37
NEDD1-211ENST00000557454 HSD17B1P14061 328 aa6.51□□□□□ -1.37
NEDD1-211ENST00000557454 PAFAH1B2P68402 229 aa6.51□□□□□ -1.37
NEDD1-211ENST00000557454 OXA1LQ15070 435 aa6.51□□□□□ -1.37
NEDD1-211ENST00000557454 CDK10Q15131 360 aa6.51□□□□□ -1.37
NEDD1-211ENST00000557454 GSG1LQ6UXU4 331 aa6.51□□□□□ -1.37
NEDD1-211ENST00000557454 TCF24Q7RTU0 167 aa6.51□□□□□ -1.37
NEDD1-211ENST00000557454 MMD2Q8IY49 270 aa6.51□□□□□ -1.37
NEDD1-211ENST00000557454 PTX4Q96A99 478 aa6.51□□□□□ -1.37
NEDD1-211ENST00000557454 C5orf30Q96GV9 206 aa6.51□□□□□ -1.37
NEDD1-211ENST00000557454 IL4I1Q96RQ9 567 aa6.51□□□□□ -1.37
NEDD1-211ENST00000557454 THTPAQ9BU02 230 aa6.51□□□□□ -1.37
NEDD1-211ENST00000557454 MS4A6AQ9H2W1 248 aa6.51□□□□□ -1.37
NEDD1-211ENST00000557454 BANF2Q9H503 90 aa6.51□□□□□ -1.37
NEDD1-211ENST00000557454 XCL2Q9UBD3 114 aa6.51□□□□□ -1.37
NEDD1-211ENST00000557454 WARS2Q9UGM6 360 aaKnown RBP6.51□□□□□ -1.37
NEDD1-211ENST00000557454 V9GYY5 206 aaPredicted RBP6.51□□□□□ -1.37
NEDD1-211ENST00000557454 C15orf62A8K5M9 175 aa6.5□□□□□ -1.37
NEDD1-211ENST00000557454 PDCD6O75340 191 aa6.5□□□□□ -1.37
NEDD1-211ENST00000557454 GAS8-AS1O95177 125 aa6.5□□□□□ -1.37
NEDD1-211ENST00000557454 GLAP06280 429 aa6.5□□□□□ -1.37
NEDD1-211ENST00000557454 PRKACGP22612 351 aa6.5□□□□□ -1.37
NEDD1-211ENST00000557454 ATP6V1E1P36543 226 aa6.5□□□□□ -1.37
NEDD1-211ENST00000557454 RPL27AP46776 148 aaKnown RBP6.5□□□□□ -1.37
NEDD1-211ENST00000557454 GYS2P54840 703 aa6.5□□□□□ -1.37
NEDD1-211ENST00000557454 SUMO1P63165 101 aaKnown RBP6.5□□□□□ -1.37
NEDD1-211ENST00000557454 ACTL10Q5JWF8 245 aa6.5□□□□□ -1.37
NEDD1-211ENST00000557454 UBE2UQ5VVX9 321 aa6.5□□□□□ -1.37
NEDD1-211ENST00000557454 SETD6Q8TBK2 473 aa6.5□□□□□ -1.37
NEDD1-211ENST00000557454 ZNF414Q96IQ9 312 aa6.5□□□□□ -1.37
NEDD1-211ENST00000557454 CLUHP3Q96NS8 147 aa6.5□□□□□ -1.37
NEDD1-211ENST00000557454 PDCD1LG2Q9BQ51 273 aa6.5□□□□□ -1.37
NEDD1-211ENST00000557454 SELENOIQ9C0D9 397 aa6.5□□□□□ -1.37
NEDD1-211ENST00000557454 NUPL2O15504 423 aaKnown RBP6.49□□□□□ -1.37
NEDD1-211ENST00000557454 ZNF735P0CB33 412 aa6.49□□□□□ -1.37
NEDD1-211ENST00000557454 ZBTB25P24278 435 aa6.49□□□□□ -1.37
NEDD1-211ENST00000557454 PTBP1P26599 531 aaKnown RBP eCLIP6.49□□□□□ -1.37
NEDD1-211ENST00000557454 DAD1P61803 113 aa6.49□□□□□ -1.37
NEDD1-211ENST00000557454 SNRPGP62308 76 aaKnown RBP6.49□□□□□ -1.37
NEDD1-211ENST00000557454 EFNB1P98172 346 aa6.49□□□□□ -1.37
NEDD1-211ENST00000557454 RNASE12Q5GAN4 147 aaKnown RBP6.49□□□□□ -1.37
NEDD1-211ENST00000557454 TMEM69Q5SWH9 247 aa6.49□□□□□ -1.37
NEDD1-211ENST00000557454 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.49□□□□□ -1.37
NEDD1-211ENST00000557454 MISP3Q96FF7 219 aa6.49□□□□□ -1.37
NEDD1-211ENST00000557454 BSCL2Q96G97 398 aaPredicted RBP6.49□□□□□ -1.37
NEDD1-211ENST00000557454 NEU1Q99519 415 aa6.49□□□□□ -1.37
NEDD1-211ENST00000557454 PRRG3Q9BZD7 231 aa6.49□□□□□ -1.37
NEDD1-211ENST00000557454 MAGIXQ9H6Y5 334 aa6.49□□□□□ -1.37
NEDD1-211ENST00000557454 SDHAF2Q9NX18 166 aa6.49□□□□□ -1.37
NEDD1-211ENST00000557454 ERVK13-1Q9NX77 482 aa6.49□□□□□ -1.37
NEDD1-211ENST00000557454 IGHV3OR16-12A0A075B7B8 117 aa6.48□□□□□ -1.37
NEDD1-211ENST00000557454 A0A087WTM6 91 aa6.48□□□□□ -1.37
NEDD1-211ENST00000557454 TCRBV5S2A0A599 114 aa6.48□□□□□ -1.37
NEDD1-211ENST00000557454 J3QLW9 94 aa6.48□□□□□ -1.37
NEDD1-211ENST00000557454 SLC16A6O15403 523 aa6.48□□□□□ -1.37
NEDD1-211ENST00000557454 RRASP10301 218 aa6.48□□□□□ -1.37
NEDD1-211ENST00000557454 MGMTP16455 207 aa6.48□□□□□ -1.37
NEDD1-211ENST00000557454 ZNF19P17023 458 aa6.48□□□□□ -1.37
NEDD1-211ENST00000557454 PSMD7P51665 324 aa6.48□□□□□ -1.37
NEDD1-211ENST00000557454 GPR176Q14439 515 aa6.48□□□□□ -1.37
NEDD1-211ENST00000557454 CLINT1Q14677 625 aa6.48□□□□□ -1.37
NEDD1-211ENST00000557454 ATP6AP1Q15904 470 aa6.48□□□□□ -1.37
NEDD1-211ENST00000557454 CGB2Q6NT52 195 aa6.48□□□□□ -1.37
NEDD1-211ENST00000557454 ZNF880Q6PDB4 577 aa6.48□□□□□ -1.37
NEDD1-211ENST00000557454 GLIPR1L1Q6UWM5 242 aa6.48□□□□□ -1.37
NEDD1-211ENST00000557454 ZNF705AQ6ZN79 300 aaPredicted RBP6.48□□□□□ -1.37
NEDD1-211ENST00000557454 C4orf36Q96KX1 117 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms