RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 SMIM20Q8N5G0 67 aa3.95□□□□□ -1.78
ATXN3-247ENST00000557311 SDR9C7Q8NEX9 313 aa3.95□□□□□ -1.78
ATXN3-247ENST00000557311 SLC26A10Q8NG04 563 aa3.95□□□□□ -1.78
ATXN3-247ENST00000557311 SLC7A13Q8TCU3 470 aa3.95□□□□□ -1.78
ATXN3-247ENST00000557311 TMEM239Q8WW34 195 aa3.95□□□□□ -1.78
ATXN3-247ENST00000557311 GGHQ92820 318 aa3.95□□□□□ -1.78
ATXN3-247ENST00000557311 HIST1H2ACQ93077 130 aa3.95□□□□□ -1.78
ATXN3-247ENST00000557311 RITA1Q96K30 269 aa3.95□□□□□ -1.78
ATXN3-247ENST00000557311 SEPHS2Q99611 448 aa3.95□□□□□ -1.78
ATXN3-247ENST00000557311 C20orf144Q9BQM9 153 aa3.95□□□□□ -1.78
ATXN3-247ENST00000557311 ZNF649Q9BS31 505 aa3.95□□□□□ -1.78
ATXN3-247ENST00000557311 OR2H1Q9GZK4 316 aa3.95□□□□□ -1.78
ATXN3-247ENST00000557311 SIRPDQ9H106 197 aa3.95□□□□□ -1.78
ATXN3-247ENST00000557311 PLEKHA1Q9HB21 404 aa3.95□□□□□ -1.78
ATXN3-247ENST00000557311 HEYLQ9NQ87 328 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-247ENST00000557311 JPT1Q9UK76 154 aa3.95□□□□□ -1.78
ATXN3-247ENST00000557311 HSF4Q9ULV5 492 aa3.95□□□□□ -1.78
ATXN3-247ENST00000557311 FOXJ3Q9UPW0 622 aa3.95□□□□□ -1.78
ATXN3-247ENST00000557311 PSG8Q9UQ74 426 aa3.95□□□□□ -1.78
ATXN3-247ENST00000557311 UFC1Q9Y3C8 167 aa3.95□□□□□ -1.78
ATXN3-247ENST00000557311 AK6Q9Y3D8 172 aaKnown RBP3.95□□□□□ -1.78
ATXN3-247ENST00000557311 TRAV8-7A0A075B6U6 113 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 PRORSD1PA6NEY8 169 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 TVP23AA6NH52 213 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 DHRS7CA6NNS2 312 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 BBIP1A8MTZ0 92 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 MFNGO00587 321 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 RAB29O14966 203 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 RBFOX2O43251 390 aaKnown RBP eCLIP3.94□□□□□ -1.78
ATXN3-247ENST00000557311 HOXB6P17509 224 aaKnown RBP3.94□□□□□ -1.78
ATXN3-247ENST00000557311 AZU1P20160 251 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 CDAP32320 146 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 DAP3P51398 398 aaKnown RBP3.94□□□□□ -1.78
ATXN3-247ENST00000557311 ISL1P61371 349 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 RHOGP84095 191 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 ST3GAL4Q11206 333 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 GAGE5Q13069 117 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 GAGE6Q13070 117 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 MELKQ14680 651 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 GNMTQ14749 295 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 UBE2V2Q15819 145 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 NSUN5P1Q3KNT7 163 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 ZNF585BQ52M93 769 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 PDZD11Q5EBL8 140 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 FAM201AQ5SY85 155 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 C22orf42Q6IC83 251 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 OR2T2Q6IF00 324 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 RPL22L1Q6P5R6 122 aaKnown RBP3.94□□□□□ -1.78
ATXN3-247ENST00000557311 RNASEKQ6P5S7 137 aaKnown RBP3.94□□□□□ -1.78
ATXN3-247ENST00000557311 WDR82Q6UXN9 313 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 TMEM182Q6ZP80 229 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-247ENST00000557311 ERASQ7Z444 233 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 CALHM3Q86XJ0 350 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 NDUFA11Q86Y39 141 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 TMEM183AQ8IXX5 376 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 KLHDC1Q8N7A1 406 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 RNF152Q8N8N0 203 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 OR8G5Q8NG78 346 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 OR4C13Q8NGP0 309 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 OR1S2Q8NGQ3 325 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 OR1N2Q8NGR9 330 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 OR2T6Q8NHC8 308 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 MARCH1Q8TCQ1 289 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 SPRYD4Q8WW59 207 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-247ENST00000557311 NABP1Q96AH0 204 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 TMEM18Q96B42 140 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 MOB3AQ96BX8 217 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 SEH1LQ96EE3 360 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 ZNF582Q96NG8 517 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-247ENST00000557311 HIST1H2BLQ99880 126 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 B9D2Q9BPU9 175 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 C20orf24Q9BUV8 137 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 ST6GALNAC5Q9BVH7 336 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 C20orf27Q9GZN8 174 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 FAM234AQ9H0X4 552 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 EXOSC4Q9NPD3 245 aaKnown RBP3.94□□□□□ -1.78
ATXN3-247ENST00000557311 BET1LQ9NYM9 111 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 OR5AC2Q9NZP5 309 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 ZNRD1Q9P1U0 126 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 NAT8Q9UHE5 227 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 SIGLEC9Q9Y336 463 aa3.94□□□□□ -1.78
ATXN3-247ENST00000557311 FXYD6-FXYD2A0A087WZ82 144 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 LOC102724200A0A096LPH7 203 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-247ENST00000557311 WI2-2373I1.2A0A1W2PRP0 233 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 TMEM235A6NFC5 223 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 CGB1A6NKQ9 187 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 E9PQ18 207 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 GNGT2O14610 69 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 ST8SIA3O43173 380 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 TPST2O60704 377 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 OR2F2O95006 317 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 OR2C1O95371 312 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 SLC2A10O95528 541 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 CSN2P05814 226 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 SFTA3P0C7M3 94 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 ASAH2BP0C7U1 165 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 SMIM17P0DL12 118 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 TMEM225BP0DP42 221 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 CD37P11049 281 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 IGLL1P15814 213 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms