RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 DRAM1Q8N682 238 aa7.65□□□□□ -1.19
SYNE3-205ENST00000557275 PLPPR1Q8TBJ4 325 aa7.65□□□□□ -1.19
SYNE3-205ENST00000557275 J3KRW8 73 aa7.65□□□□□ -1.19
SYNE3-205ENST00000557275 NDUFC2O95298 119 aa7.65□□□□□ -1.19
SYNE3-205ENST00000557275 TDGF1P13385 188 aa7.65□□□□□ -1.19
SYNE3-205ENST00000557275 EGR1P18146 543 aa7.65□□□□□ -1.19
SYNE3-205ENST00000557275 AGERQ15109 404 aa7.65□□□□□ -1.19
SYNE3-205ENST00000557275 TMEM42Q69YG0 159 aa7.65□□□□□ -1.19
SYNE3-205ENST00000557275 GPR6P46095 362 aaPredicted RBP7.64□□□□□ -1.19
SYNE3-205ENST00000557275 MESP2Q0VG99 397 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 CXorf66Q5JRM2 361 aaPredicted RBP7.64□□□□□ -1.19
SYNE3-205ENST00000557275 SAMD5Q5TGI4 173 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 TMEM91Q6ZNR0 172 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 SLC25A38Q96DW6 304 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 PSMB11A5LHX3 300 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 F2Z2F3 143 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 UPK2O00526 184 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 ACER2Q5QJU3 275 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 C1QTNF12Q5T7M4 302 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 PIMREGQ9BSJ6 248 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 PLSCR4Q9NRQ2 329 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 SEMA5BQ9P283 1151 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 TNRC6CQ9HCJ0 1690 aaKnown RBP7.64□□□□□ -1.19
SYNE3-205ENST00000557275 QSER1Q2KHR3 1735 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 TRAV8-1A0A0A6YYK1 113 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 IGHV3-43A0A0B4J1X8 118 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 IGHV3-20A0A0C4DH32 117 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 IGHV3-43DP0DP04 118 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 PF4V1P10720 104 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 SNAI3Q3KNW1 292 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 ATP5L2Q7Z4Y8 100 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 LOXL4Q96JB6 756 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 ASCL2Q99929 193 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 STRCQ7RTU9 1775 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 LOC390937A0A1W2PQ73 354 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 TOMM40O96008 361 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 GVQW1Q8N7I0 195 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 PEX7O00628 323 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 CD5P06127 495 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 GGTLC1Q9BX51 225 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 GUCA2BQ16661 112 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 PTP4A3O75365 173 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 IGF2P01344 180 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 CEACAM21Q3KPI0 293 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 JPT2Q9H910 190 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 GREB1Q4ZG55 1949 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 TM4SF4P48230 202 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 TMEM179BQ7Z7N9 219 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 LDLRAD2Q5SZI1 272 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 DUX5Q96PT3 197 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 TMEM74BQ9NUR3 256 aa7.64□□□□□ -1.19
SYNE3-205ENST00000557275 VGLL1Q99990 258 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 FGF12P61328 243 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 CNRIP1Q96F85 164 aaPredicted RBP7.63□□□□□ -1.19
SYNE3-205ENST00000557275 KLK15Q9H2R5 256 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 IL36BQ9NZH7 164 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 HBDP02042 147 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 MAGEA5P43359 124 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 CCL28Q9NRJ3 127 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 CENPWQ5EE01 88 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 FRRS1LQ9P0K9 344 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 TNFRSF6BO95407 300 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 PLAUP00749 431 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 TAF1LQ8IZX4 1826 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 PRR14LQ5THK1 2151 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 ZNF479Q96JC4 524 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 RSPO3Q9BXY4 272 aaPredicted RBP7.63□□□□□ -1.19
SYNE3-205ENST00000557275 ASB1Q9Y576 335 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 ABCA3Q99758 1704 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 ESDP10768 282 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 CXCL16Q9H2A7 254 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 MRM2Q9UI43 246 aaKnown RBP7.63□□□□□ -1.19
SYNE3-205ENST00000557275 PGPA6NDG6 321 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 ERG28Q9UKR5 140 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 MUC6Q6W4X9 2439 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 TRAV9-2A0A087WT02 112 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 NTN1O95631 604 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 C17orf99Q6UX52 265 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 CACNG8Q8WXS5 425 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 PHF7Q9BWX1 381 aaPredicted RBP7.63□□□□□ -1.19
SYNE3-205ENST00000557275 ISG15P05161 165 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.63□□□□□ -1.19
SYNE3-205ENST00000557275 ZNF488Q96MN9 340 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 HS3ST3B1Q9Y662 390 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 MYO9AB2RTY4 2548 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 CDIPTO14735 213 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 HIST1H4AP62805 103 aaKnown RBP7.63□□□□□ -1.19
SYNE3-205ENST00000557275 CRYGNQ8WXF5 182 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 GNB1LQ9BYB4 327 aa7.63□□□□□ -1.19
SYNE3-205ENST00000557275 CARHSP1Q9Y2V2 147 aaKnown RBP7.63□□□□□ -1.19
SYNE3-205ENST00000557275 CD160O95971 181 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 KLKB1P03952 638 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 FBXW9Q5XUX1 488 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 OR11H4Q8NGC9 324 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 TMEM186Q96B77 213 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 PPIAL4EA0A075B759 164 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 PPIAL4DF5H284 164 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 PPIAL4FP0DN26 164 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 SOX8P57073 446 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 HSPE1P61604 102 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms