RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 IGSF11Q5DX21 431 aa6.51□□□□□ -1.37
VRK1-206ENST00000557222 SLC16A13Q7RTY0 426 aa6.51□□□□□ -1.37
VRK1-206ENST00000557222 DEFB125Q8N687 156 aa6.51□□□□□ -1.37
VRK1-206ENST00000557222 DYNLRB2Q8TF09 96 aa6.51□□□□□ -1.37
VRK1-206ENST00000557222 RAB3CQ96E17 227 aa6.51□□□□□ -1.37
VRK1-206ENST00000557222 GFI1Q99684 422 aa6.51□□□□□ -1.37
VRK1-206ENST00000557222 SRD5A3Q9H8P0 318 aa6.51□□□□□ -1.37
VRK1-206ENST00000557222 ZNF257Q9Y2Q1 563 aa6.51□□□□□ -1.37
VRK1-206ENST00000557222 DMRT1Q9Y5R6 373 aa6.51□□□□□ -1.37
VRK1-206ENST00000557222 DNAH6Q9C0G6 4158 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 NPIPB5A8MRT5 1133 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 CRYZL1O95825 349 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 FCGR3AP08637 254 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 CD7P09564 240 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 CTXN2P0C2S0 81 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 GSTT2P0CG29 244 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 GSTT2BP0CG30 244 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 FOLR2P14207 255 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 GADD45AP24522 165 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 MAS1LP35410 378 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 ZNF45Q02386 682 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 IRF3Q14653 427 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 ARL6IP1Q15041 203 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 MED22Q15528 200 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 RNF151Q2KHN1 245 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 FAM106AQ4KMX7 169 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 TM4SF20Q53R12 229 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 LIPKQ5VXJ0 399 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 TMEM91Q6ZNR0 172 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 C5orf30Q96GV9 206 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 GINS4Q9BRT9 223 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 ZNF430Q9H8G1 570 aaPredicted RBP6.5□□□□□ -1.37
VRK1-206ENST00000557222 RETNQ9HD89 108 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 SCN3BQ9NY72 215 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 KCNK7Q9Y2U2 307 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 PRELID3BQ9Y3B1 194 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 AK6Q9Y3D8 172 aaKnown RBP6.5□□□□□ -1.37
VRK1-206ENST00000557222 RBM7Q9Y580 266 aaKnown RBP6.5□□□□□ -1.37
VRK1-206ENST00000557222 V9GY05 133 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 VPS13DQ5THJ4 4388 aa6.5□□□□□ -1.37
VRK1-206ENST00000557222 TRAV25A0A0B4J276 109 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 TMEM272A0A1B0GTI8 110 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 LINC00473A8K010 186 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 A8MWP6 167 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 PTGES3LE9PB15 166 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 EBAG9O00559 213 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 CASQ2O14958 399 aaPredicted RBP6.49□□□□□ -1.37
VRK1-206ENST00000557222 NDUFB8O95169 186 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 DHFRP00374 187 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 CRYGCP07315 174 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 HIST1H1BP16401 226 aaKnown RBP6.49□□□□□ -1.37
VRK1-206ENST00000557222 CBLN1P23435 193 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 DEFA5Q01523 94 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 GUCA2BQ16661 112 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 C15orf32Q32M92 178 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 OGFRL1Q5TC84 451 aaPredicted RBP6.49□□□□□ -1.37
VRK1-206ENST00000557222 OR4A47Q6IF82 309 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 H1FOOQ8IZA3 346 aaPredicted RBP6.49□□□□□ -1.37
VRK1-206ENST00000557222 ZNF645Q8N7E2 425 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 OR10R2Q8NGX6 335 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 VSTM2AQ8TAG5 236 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 ACOT12Q8WYK0 555 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 LINC00476Q8WZB0 136 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 MARC2Q969Z3 335 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 FAM110AQ9BQ89 295 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 GGTLC1Q9BX51 225 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 OR51E2Q9H255 320 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 VCXQ9H320 206 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 ACOT13Q9NPJ3 140 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 SLC2A9Q9NRM0 540 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 TP53TG1Q9Y2A0 90 aa6.49□□□□□ -1.37
VRK1-206ENST00000557222 MRPS7Q9Y2R9 242 aaKnown RBP6.49□□□□□ -1.37
VRK1-206ENST00000557222 HERC2O95714 4834 aa6.48□□□□□ -1.37
VRK1-206ENST00000557222 LOC102724200A0A096LPH7 203 aaPredicted RBP6.48□□□□□ -1.37
VRK1-206ENST00000557222 TRAV1-2A0A0B4J238 106 aa6.48□□□□□ -1.37
VRK1-206ENST00000557222 METTL21EPA6NDL7 271 aa6.48□□□□□ -1.37
VRK1-206ENST00000557222 NUPR2A6NF83 97 aa6.48□□□□□ -1.37
VRK1-206ENST00000557222 RAB27BO00194 218 aa6.48□□□□□ -1.37
VRK1-206ENST00000557222 MFNGO00587 321 aa6.48□□□□□ -1.37
VRK1-206ENST00000557222 PDCD5O14737 125 aa6.48□□□□□ -1.37
VRK1-206ENST00000557222 OR2J3O76001 311 aa6.48□□□□□ -1.37
VRK1-206ENST00000557222 OR2C1O95371 312 aa6.48□□□□□ -1.37
VRK1-206ENST00000557222 HLA-DQB1P01920 261 aa6.48□□□□□ -1.37
VRK1-206ENST00000557222 SAA1P0DJI8 122 aaPredicted RBP6.48□□□□□ -1.37
VRK1-206ENST00000557222 APELAP0DMC3 54 aa6.48□□□□□ -1.37
VRK1-206ENST00000557222 HIST1H1DP16402 221 aaKnown RBP6.48□□□□□ -1.37
VRK1-206ENST00000557222 CD36P16671 472 aa6.48□□□□□ -1.37
VRK1-206ENST00000557222 GALP22466 123 aa6.48□□□□□ -1.37
VRK1-206ENST00000557222 DTYMKP23919 212 aa6.48□□□□□ -1.37
VRK1-206ENST00000557222 PSMB6P28072 239 aa6.48□□□□□ -1.37
VRK1-206ENST00000557222 TALDO1P37837 337 aa6.48□□□□□ -1.37
VRK1-206ENST00000557222 MLLT11Q13015 90 aaPredicted RBP6.48□□□□□ -1.37
VRK1-206ENST00000557222 ARFRP1Q13795 201 aa6.48□□□□□ -1.37
VRK1-206ENST00000557222 ZNF57Q68EA5 555 aaPredicted RBP6.48□□□□□ -1.37
VRK1-206ENST00000557222 IDO2Q6ZQW0 420 aa6.48□□□□□ -1.37
VRK1-206ENST00000557222 TMEM167AQ8TBQ9 72 aa6.48□□□□□ -1.37
VRK1-206ENST00000557222 TMEM203Q969S6 136 aa6.48□□□□□ -1.37
VRK1-206ENST00000557222 OVOL2Q9BRP0 275 aa6.48□□□□□ -1.37
VRK1-206ENST00000557222 AIFM2Q9BRQ8 373 aa6.48□□□□□ -1.37
VRK1-206ENST00000557222 DUSP21Q9H596 190 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms