RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 ENTPD8Q5MY95 495 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 ASPHD1Q5U4P2 390 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 RYBPQ8N488 228 aaPredicted RBP5.14□□□□□ -1.59
TDP1-215ENST00000556498 Q8N976 141 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 GJC3Q8NFK1 279 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 OR9G1Q8NH87 305 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 RASL10AQ92737 203 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 SDF2L1Q9HCN8 221 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 MANBALQ9NQG1 85 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 CSAG2Q9Y5P2 127 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 INSL5Q9Y5Q6 135 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 DLG5Q8TDM6 1919 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 ZNF106Q9H2Y7 1883 aaKnown RBP5.13□□□□□ -1.59
TDP1-215ENST00000556498 GLI3P10071 1580 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 THSD7AQ9UPZ6 1657 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 TSPAN11A1L157 253 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 LMO7DNF2Z398 122 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 H3BUT2 72 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 UQCRQO14949 82 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 SOCS1O15524 211 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 NTN1O95631 604 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 APOC2P02655 101 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 MRPL3P09001 348 aaKnown RBP5.13□□□□□ -1.59
TDP1-215ENST00000556498 CRISP2P16562 243 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 KLK2P20151 261 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 OPRK1P41145 380 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 RPS4XP62701 263 aaKnown RBP5.13□□□□□ -1.59
TDP1-215ENST00000556498 GNB2P62879 340 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 CEACAM16Q2WEN9 425 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 GJB7Q6PEY0 223 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 PAQR6Q6TCH4 344 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 RNF144BQ7Z419 303 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 CMC1Q7Z7K0 106 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 PRIMA1Q86XR5 153 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 ZNF808Q8N4W9 903 aaPredicted RBP5.13□□□□□ -1.59
TDP1-215ENST00000556498 MRPL24Q96A35 216 aaKnown RBP5.13□□□□□ -1.59
TDP1-215ENST00000556498 ZNF670Q9BS34 389 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 RNASE7Q9H1E1 156 aaKnown RBP5.13□□□□□ -1.59
TDP1-215ENST00000556498 FBXL15Q9H469 300 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 JPT2Q9H910 190 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 PELI2Q9HAT8 420 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 HRASLS2Q9NWW9 162 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 OR1A2Q9Y585 309 aa5.13□□□□□ -1.59
TDP1-215ENST00000556498 FOCADQ5VW36 1801 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 TMED7-TICAM2A0A0A6YYA0 188 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 TRAV1-1A0A0B4J248 108 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 C15orf61A6NNL5 157 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 ZNF736B4DX44 427 aaPredicted RBP5.12□□□□□ -1.59
TDP1-215ENST00000556498 NPIPB11E5RHQ5 1161 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 H0YL77 283 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 OVOL1O14753 267 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 APOMO95445 188 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 PRH1P02810 166 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 MT-ND6P03923 174 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 SLC25A5P05141 298 aaKnown RBP5.12□□□□□ -1.59
TDP1-215ENST00000556498 MYOD1P15172 320 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 IGFBP3P17936 291 aaPredicted RBP5.12□□□□□ -1.59
TDP1-215ENST00000556498 PSMB3P49720 205 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 CSRP3P50461 194 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 CAV3P56539 151 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 TMEM258P61165 79 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 RPL15P61313 204 aaKnown RBP5.12□□□□□ -1.59
TDP1-215ENST00000556498 WDR5P61964 334 aaKnown RBP5.12□□□□□ -1.59
TDP1-215ENST00000556498 ZNF85Q03923 595 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 ZNF90Q03938 601 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 KIAA0040Q15053 153 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 ZNF260Q3ZCT1 412 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 KLF17Q5JT82 389 aaPredicted RBP5.12□□□□□ -1.59
TDP1-215ENST00000556498 SERTAD4-AS1Q5TG53 156 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 SLC35E4Q6ICL7 350 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 RFLNAQ6ZTI6 216 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 BAGE3Q86Y29 109 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 BAGE2Q86Y30 109 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 ATOH7Q8N100 152 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 C10orf126Q8N4M7 172 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 CYB561D1Q8N8Q1 229 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 OR10G2Q8NGC3 310 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 DDB2Q92466 427 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 LINC00526Q96FQ7 95 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 BMFQ96LC9 184 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 C9orf85Q96MD7 179 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 DEFB118Q96PH6 123 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 KRTAP4-12Q9BQ66 201 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 NAA38Q9BRA0 125 aaKnown RBP5.12□□□□□ -1.59
TDP1-215ENST00000556498 TMEM222Q9H0R3 208 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 NAA60Q9H7X0 242 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 ISG20L2Q9H9L3 353 aaKnown RBP5.12□□□□□ -1.59
TDP1-215ENST00000556498 NRN1Q9NPD7 142 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 TVP23BQ9NYZ1 205 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 SIRT4Q9Y6E7 314 aaPredicted RBP5.12□□□□□ -1.59
TDP1-215ENST00000556498 PAPPAQ13219 1627 aa5.12□□□□□ -1.59
TDP1-215ENST00000556498 SIPA1L3O60292 1781 aaPredicted RBP5.11□□□□□ -1.59
TDP1-215ENST00000556498 LOC107984640A0A0U1RRK4 108 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 TCRBV7S3A2A0A539 114 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 EEF1E1-BLOC1S5C9J1V9 151 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 SYS1-DBNDD2H3BUS1 97 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 SLC17A2O00624 439 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 ZNF737O75373 536 aa5.11□□□□□ -1.59
TDP1-215ENST00000556498 DUSP14O95147 198 aaKnown RBP5.11□□□□□ -1.59
TDP1-215ENST00000556498 LSM8O95777 96 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms