RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 COL4A4P53420 1690 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF40-207ENST00000556399 GTF3AQ92664 365 aaKnown RBP12.7□□□□□ -0.38
ARHGEF40-207ENST00000556399 LEAP2Q969E1 77 aa12.7□□□□□ -0.38
ARHGEF40-207ENST00000556399 GOLGB1Q14789 3259 aaKnown RBP12.69□□□□□ -0.38
ARHGEF40-207ENST00000556399 TRBV9A0A0B4J1U6 114 aa12.69□□□□□ -0.38
ARHGEF40-207ENST00000556399 CENPWQ5EE01 88 aa12.69□□□□□ -0.38
ARHGEF40-207ENST00000556399 ZNF738Q8NE65 137 aa12.69□□□□□ -0.38
ARHGEF40-207ENST00000556399 ZNF703Q9H7S9 590 aaPredicted RBP12.69□□□□□ -0.38
ARHGEF40-207ENST00000556399 SAP30LQ9HAJ7 183 aa12.69□□□□□ -0.38
ARHGEF40-207ENST00000556399 SEBOXQ9HB31 216 aaPredicted RBP12.69□□□□□ -0.38
ARHGEF40-207ENST00000556399 LOC102723996A0A087X1L8 192 aa12.69□□□□□ -0.38
ARHGEF40-207ENST00000556399 K7ESF4 209 aa12.69□□□□□ -0.38
ARHGEF40-207ENST00000556399 LINC00869P0C866 280 aa12.69□□□□□ -0.38
ARHGEF40-207ENST00000556399 GPX4P36969 197 aaPredicted RBP12.69□□□□□ -0.38
ARHGEF40-207ENST00000556399 REG1BP48304 166 aa12.69□□□□□ -0.38
ARHGEF40-207ENST00000556399 SPSB3Q6PJ21 355 aa12.69□□□□□ -0.38
ARHGEF40-207ENST00000556399 DOLPP1Q86YN1 238 aa12.69□□□□□ -0.38
ARHGEF40-207ENST00000556399 STXBP6Q8NFX7 210 aa12.69□□□□□ -0.38
ARHGEF40-207ENST00000556399 IL36BQ9NZH7 164 aa12.69□□□□□ -0.38
ARHGEF40-207ENST00000556399 IL6RP08887 468 aaPredicted RBP12.69□□□□□ -0.38
ARHGEF40-207ENST00000556399 C1QTNF9P0C862 333 aa12.69□□□□□ -0.38
ARHGEF40-207ENST00000556399 OR2T6Q8NHC8 308 aa12.69□□□□□ -0.38
ARHGEF40-207ENST00000556399 JPT1Q9UK76 154 aa12.69□□□□□ -0.38
ARHGEF40-207ENST00000556399 PMCHL1Q16048 86 aa12.69□□□□□ -0.38
ARHGEF40-207ENST00000556399 TCF23Q7RTU1 214 aa12.69□□□□□ -0.38
ARHGEF40-207ENST00000556399 CALYQ9NYX4 217 aa12.69□□□□□ -0.38
ARHGEF40-207ENST00000556399 RAMP3O60896 148 aa12.68□□□□□ -0.38
ARHGEF40-207ENST00000556399 OTX1P32242 354 aaPredicted RBP12.68□□□□□ -0.38
ARHGEF40-207ENST00000556399 GTF2H5Q6ZYL4 71 aa12.68□□□□□ -0.38
ARHGEF40-207ENST00000556399 ATOH7Q8N100 152 aa12.68□□□□□ -0.38
ARHGEF40-207ENST00000556399 SIGLEC12Q96PQ1 595 aa12.68□□□□□ -0.38
ARHGEF40-207ENST00000556399 NABP2Q9BQ15 211 aa12.68□□□□□ -0.38
ARHGEF40-207ENST00000556399 BMPR1BO00238 502 aa12.67□□□□□ -0.38
ARHGEF40-207ENST00000556399 RRHO14718 337 aa12.67□□□□□ -0.38
ARHGEF40-207ENST00000556399 NAPSAO96009 420 aa12.67□□□□□ -0.38
ARHGEF40-207ENST00000556399 SRSF7Q16629 238 aaKnown RBP eCLIP12.67□□□□□ -0.38
ARHGEF40-207ENST00000556399 RPL39P5Q59GN2 51 aa12.67□□□□□ -0.38
ARHGEF40-207ENST00000556399 TMEM108Q6UXF1 575 aa12.67□□□□□ -0.38
ARHGEF40-207ENST00000556399 PLAUP00749 431 aa12.67□□□□□ -0.38
ARHGEF40-207ENST00000556399 C8orf88P0DMB2 117 aa12.67□□□□□ -0.38
ARHGEF40-207ENST00000556399 APELAP0DMC3 54 aa12.67□□□□□ -0.38
ARHGEF40-207ENST00000556399 SPEM2Q0P670 501 aa12.67□□□□□ -0.38
ARHGEF40-207ENST00000556399 C19orf35Q6ZS72 473 aa12.67□□□□□ -0.38
ARHGEF40-207ENST00000556399 GCSAMQ8N6F7 178 aa12.67□□□□□ -0.38
ARHGEF40-207ENST00000556399 MS4A5Q9H3V2 200 aa12.67□□□□□ -0.38
ARHGEF40-207ENST00000556399 J3QW42 95 aa12.67□□□□□ -0.38
ARHGEF40-207ENST00000556399 TMEM42Q69YG0 159 aa12.67□□□□□ -0.38
ARHGEF40-207ENST00000556399 RPEQ96AT9 228 aa12.67□□□□□ -0.38
ARHGEF40-207ENST00000556399 KLF2Q9Y5W3 355 aaPredicted RBP12.67□□□□□ -0.38
ARHGEF40-207ENST00000556399 PGPEP1LA6NFU8 196 aa12.66□□□□□ -0.38
ARHGEF40-207ENST00000556399 CCL13Q99616 98 aa12.66□□□□□ -0.38
ARHGEF40-207ENST00000556399 COL4A3Q01955 1670 aa12.66□□□□□ -0.38
ARHGEF40-207ENST00000556399 CGAP01215 116 aa12.66□□□□□ -0.38
ARHGEF40-207ENST00000556399 C14orf144Q96I85 54 aa12.66□□□□□ -0.38
ARHGEF40-207ENST00000556399 ZNF497Q6ZNH5 498 aa12.66□□□□□ -0.38
ARHGEF40-207ENST00000556399 RPP25LQ8N5L8 163 aaKnown RBP12.66□□□□□ -0.38
ARHGEF40-207ENST00000556399 OR13A1Q8NGR1 328 aa12.66□□□□□ -0.38
ARHGEF40-207ENST00000556399 KIAA1671Q9BY89 1806 aa12.66□□□□□ -0.38
ARHGEF40-207ENST00000556399 IGHV2-5P01817 119 aa12.66□□□□□ -0.38
ARHGEF40-207ENST00000556399 SSBP3Q9BWW4 388 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF40-207ENST00000556399 ASCL3Q9NQ33 180 aa12.66□□□□□ -0.38
ARHGEF40-207ENST00000556399 HSPB8Q9UJY1 196 aa12.66□□□□□ -0.38
ARHGEF40-207ENST00000556399 FANCMQ8IYD8 2048 aa12.66□□□□□ -0.38
ARHGEF40-207ENST00000556399 ALPK3Q96L96 1907 aa12.65□□□□□ -0.38
ARHGEF40-207ENST00000556399 IGHV3-21A0A0B4J1V1 117 aa12.65□□□□□ -0.38
ARHGEF40-207ENST00000556399 A8MWL6 223 aa12.65□□□□□ -0.38
ARHGEF40-207ENST00000556399 CA2P00918 260 aa12.65□□□□□ -0.38
ARHGEF40-207ENST00000556399 ADMP35318 185 aa12.65□□□□□ -0.38
ARHGEF40-207ENST00000556399 ACP7Q6ZNF0 438 aa12.65□□□□□ -0.38
ARHGEF40-207ENST00000556399 TBL2Q9Y4P3 447 aaKnown RBP12.65□□□□□ -0.38
ARHGEF40-207ENST00000556399 SERF1AO75920 110 aa12.65□□□□□ -0.38
ARHGEF40-207ENST00000556399 RIGQ13278 110 aa12.65□□□□□ -0.38
ARHGEF40-207ENST00000556399 ITLN1Q8WWA0 313 aa12.65□□□□□ -0.38
ARHGEF40-207ENST00000556399 SFXN3Q9BWM7 321 aa12.65□□□□□ -0.38
ARHGEF40-207ENST00000556399 LIME1Q9H400 295 aa12.65□□□□□ -0.38
ARHGEF40-207ENST00000556399 ARL16Q0P5N6 197 aa12.65□□□□□ -0.38
ARHGEF40-207ENST00000556399 PCSK4Q6UW60 755 aa12.65□□□□□ -0.38
ARHGEF40-207ENST00000556399 IGHV2-70P01814 119 aa12.65□□□□□ -0.38
ARHGEF40-207ENST00000556399 COX7A1P24310 79 aa12.65□□□□□ -0.38
ARHGEF40-207ENST00000556399 ZNF124Q15973 351 aa12.65□□□□□ -0.38
ARHGEF40-207ENST00000556399 FAM90A2PQ658T7 463 aa12.65□□□□□ -0.38
ARHGEF40-207ENST00000556399 SSX8Q7RTT4 187 aa12.65□□□□□ -0.38
ARHGEF40-207ENST00000556399 OPN3Q9H1Y3 402 aaPredicted RBP12.65□□□□□ -0.38
ARHGEF40-207ENST00000556399 AMMECR1Q9Y4X0 333 aaPredicted RBP12.65□□□□□ -0.38
ARHGEF40-207ENST00000556399 LNP1A1A4G5 178 aa12.64□□□□□ -0.39
ARHGEF40-207ENST00000556399 DCTN5Q9BTE1 182 aa12.64□□□□□ -0.39
ARHGEF40-207ENST00000556399 DNAJC4Q9NNZ3 241 aa12.64□□□□□ -0.39
ARHGEF40-207ENST00000556399 DEPPQ9NTK1 212 aa12.64□□□□□ -0.39
ARHGEF40-207ENST00000556399 ZNF106Q9H2Y7 1883 aaKnown RBP12.64□□□□□ -0.39
ARHGEF40-207ENST00000556399 DPRXA6NFQ7 191 aa12.64□□□□□ -0.39
ARHGEF40-207ENST00000556399 CRYABP02511 175 aaKnown RBP12.64□□□□□ -0.39
ARHGEF40-207ENST00000556399 DLL1O00548 723 aa12.64□□□□□ -0.39
ARHGEF40-207ENST00000556399 IGKV1-5P01602 117 aa12.64□□□□□ -0.39
ARHGEF40-207ENST00000556399 IL15RAQ13261 267 aa12.64□□□□□ -0.39
ARHGEF40-207ENST00000556399 GCSAMLQ5JQS6 135 aa12.64□□□□□ -0.39
ARHGEF40-207ENST00000556399 C1orf174Q8IYL3 243 aa12.64□□□□□ -0.39
ARHGEF40-207ENST00000556399 WNT10AQ9GZT5 417 aa12.64□□□□□ -0.39
ARHGEF40-207ENST00000556399 A0A0G2JRQ6 117 aa12.64□□□□□ -0.39
ARHGEF40-207ENST00000556399 IFITM10A6NMD0 228 aa12.64□□□□□ -0.39
ARHGEF40-207ENST00000556399 FAM87AP0C7U9 286 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms