RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 ELOVL1Q9BW60 279 aa13.4□□□□□ -0.26
TUBB3-209ENST00000555609 PXMP4Q9Y6I8 212 aa13.4□□□□□ -0.26
TUBB3-209ENST00000555609 LY96Q9Y6Y9 160 aa13.4□□□□□ -0.26
TUBB3-209ENST00000555609 ARL2-SNX15V9GYD0 113 aa13.4□□□□□ -0.26
TUBB3-209ENST00000555609 DCHS1Q96JQ0 3298 aa13.39□□□□□ -0.27
TUBB3-209ENST00000555609 IGKV1D-17A0A075B6S4 117 aa13.39□□□□□ -0.27
TUBB3-209ENST00000555609 GZMBP10144 247 aa13.39□□□□□ -0.27
TUBB3-209ENST00000555609 EDDM3BP56851 147 aa13.39□□□□□ -0.27
TUBB3-209ENST00000555609 LOXL3P58215 753 aa13.39□□□□□ -0.27
TUBB3-209ENST00000555609 EDDM3AQ14507 147 aa13.39□□□□□ -0.27
TUBB3-209ENST00000555609 SPINK9Q5DT21 86 aa13.39□□□□□ -0.27
TUBB3-209ENST00000555609 DDB2Q92466 427 aa13.39□□□□□ -0.27
TUBB3-209ENST00000555609 SFXN3Q9BWM7 321 aa13.39□□□□□ -0.27
TUBB3-209ENST00000555609 GGTLC1Q9BX51 225 aa13.39□□□□□ -0.27
TUBB3-209ENST00000555609 LSM4Q9Y4Z0 139 aaKnown RBP13.39□□□□□ -0.27
TUBB3-209ENST00000555609 KIAA2026Q5HYC2 2103 aa13.39□□□□□ -0.27
TUBB3-209ENST00000555609 PLA2G5P39877 138 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 THBS3P49746 956 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 CNN1P51911 297 aaKnown RBP13.38□□□□□ -0.27
TUBB3-209ENST00000555609 ATP5IP56385 69 aaPredicted RBP13.38□□□□□ -0.27
TUBB3-209ENST00000555609 TRIP6Q15654 476 aaKnown RBP13.38□□□□□ -0.27
TUBB3-209ENST00000555609 SSX2Q16385 188 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 OR2Z1Q8NG97 314 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 MGST2Q99735 147 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 IFI27L2Q9H2X8 130 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 TMEM140Q9NV12 185 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 FUT9Q9Y231 359 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 TCF19Q9Y242 345 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 FOXA2Q9Y261 457 aaPredicted RBP13.38□□□□□ -0.27
TUBB3-209ENST00000555609 SLC25A15Q9Y619 301 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 AHCTF1Q8WYP5 2266 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 SPTBN4Q9H254 2564 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 TRAV38-1A0A0B4J264 116 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 MDFIC2A0A1B0GVS7 189 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 NDUFB4O95168 129 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 CGAP01215 116 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 IGHV3-13P01766 116 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 RD3LP0DJH9 198 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 CGB3P0DN86 165 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 CGB7P0DN87 165 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 CCL11P51671 97 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 RPL15P61313 204 aaKnown RBP13.38□□□□□ -0.27
TUBB3-209ENST00000555609 RPS16P62249 146 aaKnown RBP13.38□□□□□ -0.27
TUBB3-209ENST00000555609 POU2AF1Q16633 256 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 TMEM37Q8WXS4 190 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 SFRP2Q96HF1 295 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 DCTN5Q9BTE1 182 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 MS4A5Q9H3V2 200 aa13.38□□□□□ -0.27
TUBB3-209ENST00000555609 A0A087X0M5 115 aa13.37□□□□□ -0.27
TUBB3-209ENST00000555609 A0A1B0GX30 115 aa13.37□□□□□ -0.27
TUBB3-209ENST00000555609 C15orf61A6NNL5 157 aa13.37□□□□□ -0.27
TUBB3-209ENST00000555609 RRHO14718 337 aa13.37□□□□□ -0.27
TUBB3-209ENST00000555609 LHBP01229 141 aa13.37□□□□□ -0.27
TUBB3-209ENST00000555609 EGR1P18146 543 aa13.37□□□□□ -0.27
TUBB3-209ENST00000555609 IL3RAP26951 378 aa13.37□□□□□ -0.27
TUBB3-209ENST00000555609 RPL29P47914 159 aaKnown RBP13.37□□□□□ -0.27
TUBB3-209ENST00000555609 ATP5G3P48201 142 aa13.37□□□□□ -0.27
TUBB3-209ENST00000555609 RHOBP62745 196 aa13.37□□□□□ -0.27
TUBB3-209ENST00000555609 FAM78BQ5VT40 261 aa13.37□□□□□ -0.27
TUBB3-209ENST00000555609 FDCSPQ8NFU4 85 aa13.37□□□□□ -0.27
TUBB3-209ENST00000555609 STARD4Q96DR4 205 aa13.37□□□□□ -0.27
TUBB3-209ENST00000555609 CALYQ9NYX4 217 aa13.37□□□□□ -0.27
TUBB3-209ENST00000555609 DUSP13Q9UII6 198 aa13.37□□□□□ -0.27
TUBB3-209ENST00000555609 FZR1Q9UM11 496 aa13.37□□□□□ -0.27
TUBB3-209ENST00000555609 DOCK7Q96N67 2140 aa13.37□□□□□ -0.27
TUBB3-209ENST00000555609 TNFSF13O75888 250 aa13.36□□□□□ -0.27
TUBB3-209ENST00000555609 TFF1P04155 84 aa13.36□□□□□ -0.27
TUBB3-209ENST00000555609 CHRNA7P36544 502 aa13.36□□□□□ -0.27
TUBB3-209ENST00000555609 LINC00205P59089 165 aa13.36□□□□□ -0.27
TUBB3-209ENST00000555609 HSPE1P61604 102 aaKnown RBP13.36□□□□□ -0.27
TUBB3-209ENST00000555609 TEPPQ6URK8 271 aa13.36□□□□□ -0.27
TUBB3-209ENST00000555609 BEND2Q8NDZ0 799 aa13.36□□□□□ -0.27
TUBB3-209ENST00000555609 Q8TCH9 128 aa13.36□□□□□ -0.27
TUBB3-209ENST00000555609 OPN3Q9H1Y3 402 aaPredicted RBP13.36□□□□□ -0.27
TUBB3-209ENST00000555609 ENY2Q9NPA8 101 aa13.36□□□□□ -0.27
TUBB3-209ENST00000555609 TRAPPC1Q9Y5R8 145 aa13.36□□□□□ -0.27
TUBB3-209ENST00000555609 A0A0U1RQK1 487 aa13.36□□□□□ -0.27
TUBB3-209ENST00000555609 ZNF320A2RRD8 509 aa13.36□□□□□ -0.27
TUBB3-209ENST00000555609 ARL14EPLP0DKL9 152 aa13.36□□□□□ -0.27
TUBB3-209ENST00000555609 AREGP15514 252 aa13.36□□□□□ -0.27
TUBB3-209ENST00000555609 YPEL3P61236 119 aaPredicted RBP13.36□□□□□ -0.27
TUBB3-209ENST00000555609 C11orf52Q96A22 123 aa13.36□□□□□ -0.27
TUBB3-209ENST00000555609 MEGF10Q96KG7 1140 aa13.36□□□□□ -0.27
TUBB3-209ENST00000555609 UHRF2Q96PU4 802 aa13.36□□□□□ -0.27
TUBB3-209ENST00000555609 TMEM14BQ9NUH8 114 aa13.36□□□□□ -0.27
TUBB3-209ENST00000555609 PTPRBP23467 1997 aa13.35□□□□□ -0.27
TUBB3-209ENST00000555609 MBD3L4A6NDZ8 208 aaPredicted RBP13.35□□□□□ -0.27
TUBB3-209ENST00000555609 MBD3L3A6NE82 208 aaPredicted RBP13.35□□□□□ -0.27
TUBB3-209ENST00000555609 MBD3L5A6NJ08 208 aaPredicted RBP13.35□□□□□ -0.27
TUBB3-209ENST00000555609 C9JCJ5 164 aa13.35□□□□□ -0.27
TUBB3-209ENST00000555609 CRYAAP02489 173 aa13.35□□□□□ -0.27
TUBB3-209ENST00000555609 GLRXP35754 106 aa13.35□□□□□ -0.27
TUBB3-209ENST00000555609 GATA4P43694 442 aa13.35□□□□□ -0.27
TUBB3-209ENST00000555609 UBE2G2P60604 165 aa13.35□□□□□ -0.27
TUBB3-209ENST00000555609 LTC4SQ16873 150 aa13.35□□□□□ -0.27
TUBB3-209ENST00000555609 IQCJQ1A5X6 159 aa13.35□□□□□ -0.27
TUBB3-209ENST00000555609 GCSAMLQ5JQS6 135 aa13.35□□□□□ -0.27
TUBB3-209ENST00000555609 SSX9Q7RTT3 188 aa13.35□□□□□ -0.27
TUBB3-209ENST00000555609 GBGT1Q8N5D6 347 aa13.35□□□□□ -0.27
TUBB3-209ENST00000555609 MBD3L2Q8NHZ7 208 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms