RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 SRSF2Q01130 221 aaKnown RBP8.61□□□□□ -1.03
TDP1-211ENST00000555178 SRSF4Q08170 494 aaKnown RBP8.61□□□□□ -1.03
TDP1-211ENST00000555178 HES1Q14469 280 aa8.61□□□□□ -1.03
TDP1-211ENST00000555178 DHRS7BQ6IAN0 325 aaPredicted RBP8.61□□□□□ -1.03
TDP1-211ENST00000555178 TMEM219Q86XT9 240 aa8.61□□□□□ -1.03
TDP1-211ENST00000555178 NMES1Q9C002 83 aa8.61□□□□□ -1.03
TDP1-211ENST00000555178 SH2D7A6NKC9 451 aaPredicted RBP8.6□□□□□ -1.03
TDP1-211ENST00000555178 PITX3O75364 302 aa8.6□□□□□ -1.03
TDP1-211ENST00000555178 IGHV4-59P01825 116 aa8.6□□□□□ -1.03
TDP1-211ENST00000555178 HNRNPCP07910 306 aaKnown RBP eCLIP8.6□□□□□ -1.03
TDP1-211ENST00000555178 FOSL1P15407 271 aa8.6□□□□□ -1.03
TDP1-211ENST00000555178 MC5RP33032 325 aa8.6□□□□□ -1.03
TDP1-211ENST00000555178 RAP2BP61225 183 aa8.6□□□□□ -1.03
TDP1-211ENST00000555178 ERVK-16P61578 105 aa8.6□□□□□ -1.03
TDP1-211ENST00000555178 PJVKQ0ZLH3 352 aa8.6□□□□□ -1.03
TDP1-211ENST00000555178 SMCO1Q147U7 214 aa8.6□□□□□ -1.03
TDP1-211ENST00000555178 LY6EQ16553 131 aa8.6□□□□□ -1.03
TDP1-211ENST00000555178 OSR1Q8TAX0 266 aaPredicted RBP8.6□□□□□ -1.03
TDP1-211ENST00000555178 EAF1Q96JC9 268 aaPredicted RBP8.6□□□□□ -1.03
TDP1-211ENST00000555178 QTRT1Q9BXR0 403 aaKnown RBP8.6□□□□□ -1.03
TDP1-211ENST00000555178 OR5AC2Q9NZP5 309 aa8.6□□□□□ -1.03
TDP1-211ENST00000555178 LSM5Q9Y4Y9 91 aaKnown RBP8.6□□□□□ -1.03
TDP1-211ENST00000555178 OPN1MWP04001 364 aa8.6□□□□□ -1.03
TDP1-211ENST00000555178 OPN1MW2P0DN77 364 aa8.6□□□□□ -1.03
TDP1-211ENST00000555178 OPN1MW3P0DN78 364 aa8.6□□□□□ -1.03
TDP1-211ENST00000555178 RRASP10301 218 aa8.6□□□□□ -1.03
TDP1-211ENST00000555178 POLR2GP62487 172 aaKnown RBP eCLIP8.6□□□□□ -1.03
TDP1-211ENST00000555178 RELBQ01201 579 aa8.6□□□□□ -1.03
TDP1-211ENST00000555178 MRGPRG-AS1Q2M3A8 158 aa8.6□□□□□ -1.03
TDP1-211ENST00000555178 TUSC1Q2TAM9 212 aa8.6□□□□□ -1.03
TDP1-211ENST00000555178 THOC7Q6I9Y2 204 aaKnown RBP8.6□□□□□ -1.03
TDP1-211ENST00000555178 CCDC144NLQ6NUI1 221 aa8.6□□□□□ -1.03
TDP1-211ENST00000555178 SIGLECL1Q8N7X8 197 aa8.6□□□□□ -1.03
TDP1-211ENST00000555178 OR1S1Q8NH92 325 aa8.6□□□□□ -1.03
TDP1-211ENST00000555178 SSX3Q99909 188 aa8.6□□□□□ -1.03
TDP1-211ENST00000555178 MEGF9Q9H1U4 602 aa8.6□□□□□ -1.03
TDP1-211ENST00000555178 MBD2Q9UBB5 411 aa8.6□□□□□ -1.03
TDP1-211ENST00000555178 RCL1Q9Y2P8 373 aaKnown RBP8.6□□□□□ -1.03
TDP1-211ENST00000555178 A0A1B0GU03 582 aa8.59□□□□□ -1.03
TDP1-211ENST00000555178 FAM90A9PA6NNJ1 464 aa8.59□□□□□ -1.03
TDP1-211ENST00000555178 H3BUX3 64 aa8.59□□□□□ -1.03
TDP1-211ENST00000555178 K7EPK0 472 aa8.59□□□□□ -1.03
TDP1-211ENST00000555178 RBMXL2O75526 392 aaKnown RBP8.59□□□□□ -1.03
TDP1-211ENST00000555178 MPC2O95563 127 aa8.59□□□□□ -1.03
TDP1-211ENST00000555178 HRASP01112 189 aa8.59□□□□□ -1.03
TDP1-211ENST00000555178 CD1BP29016 333 aa8.59□□□□□ -1.03
TDP1-211ENST00000555178 SRP14P37108 136 aaKnown RBP8.59□□□□□ -1.03
TDP1-211ENST00000555178 POU2AF1Q16633 256 aa8.59□□□□□ -1.03
TDP1-211ENST00000555178 ZFP69Q49AA0 526 aa8.59□□□□□ -1.03
TDP1-211ENST00000555178 C10orf55Q5SWW7 151 aa8.59□□□□□ -1.03
TDP1-211ENST00000555178 PUSL1Q8N0Z8 303 aaKnown RBP8.59□□□□□ -1.03
TDP1-211ENST00000555178 FAM71E2Q8N5Q1 922 aa8.59□□□□□ -1.03
TDP1-211ENST00000555178 ZDHHC16Q969W1 377 aa8.59□□□□□ -1.03
TDP1-211ENST00000555178 CLCC1Q96S66 551 aa8.59□□□□□ -1.03
TDP1-211ENST00000555178 FAM96BQ9Y3D0 163 aa8.59□□□□□ -1.03
TDP1-211ENST00000555178 JMJD1CQ15652 2540 aa8.59□□□□□ -1.04
TDP1-211ENST00000555178 FXYD6-FXYD2A0A087WZ82 144 aa8.58□□□□□ -1.04
TDP1-211ENST00000555178 OOSP1A8MZH6 123 aa8.58□□□□□ -1.04
TDP1-211ENST00000555178 ST8SIA3O43173 380 aa8.58□□□□□ -1.04
TDP1-211ENST00000555178 KBTBD11O94819 623 aa8.58□□□□□ -1.04
TDP1-211ENST00000555178 OR2F2O95006 317 aa8.58□□□□□ -1.04
TDP1-211ENST00000555178 MOSP00540 346 aa8.58□□□□□ -1.04
TDP1-211ENST00000555178 PSG5Q15238 335 aa8.58□□□□□ -1.04
TDP1-211ENST00000555178 MMDQ15546 238 aa8.58□□□□□ -1.04
TDP1-211ENST00000555178 C9orf139Q6ZV77 190 aa8.58□□□□□ -1.04
TDP1-211ENST00000555178 SPIN2AQ99865 258 aa8.58□□□□□ -1.04
TDP1-211ENST00000555178 SPIN2BQ9BPZ2 258 aa8.58□□□□□ -1.04
TDP1-211ENST00000555178 RNF126Q9BV68 326 aa8.58□□□□□ -1.04
TDP1-211ENST00000555178 FBXL15Q9H469 300 aa8.58□□□□□ -1.04
TDP1-211ENST00000555178 ESM1Q9NQ30 184 aa8.58□□□□□ -1.04
TDP1-211ENST00000555178 PLSCR3Q9NRY6 295 aa8.58□□□□□ -1.04
TDP1-211ENST00000555178 CHST1O43916 411 aa8.58□□□□□ -1.04
TDP1-211ENST00000555178 SSSCA1O60232 199 aa8.58□□□□□ -1.04
TDP1-211ENST00000555178 TMEM50AO95807 157 aa8.58□□□□□ -1.04
TDP1-211ENST00000555178 C1QBP02746 253 aa8.58□□□□□ -1.04
TDP1-211ENST00000555178 IL6RP08887 468 aaPredicted RBP8.58□□□□□ -1.04
TDP1-211ENST00000555178 PSMB6P28072 239 aa8.58□□□□□ -1.04
TDP1-211ENST00000555178 NKX2-1P43699 371 aaPredicted RBP8.58□□□□□ -1.04
TDP1-211ENST00000555178 Q8N6K4 173 aa8.58□□□□□ -1.04
TDP1-211ENST00000555178 ZNF430Q9H8G1 570 aaPredicted RBP8.58□□□□□ -1.04
TDP1-211ENST00000555178 C15orf61A6NNL5 157 aa8.57□□□□□ -1.04
TDP1-211ENST00000555178 E7EUB6 86 aa8.57□□□□□ -1.04
TDP1-211ENST00000555178 UPK2O00526 184 aa8.57□□□□□ -1.04
TDP1-211ENST00000555178 FCN1O00602 326 aa8.57□□□□□ -1.04
TDP1-211ENST00000555178 HOXA3O43365 443 aaPredicted RBP8.57□□□□□ -1.04
TDP1-211ENST00000555178 ATG12O94817 140 aa8.57□□□□□ -1.04
TDP1-211ENST00000555178 FBP1P09467 338 aa8.57□□□□□ -1.04
TDP1-211ENST00000555178 IAPPP10997 89 aa8.57□□□□□ -1.04
TDP1-211ENST00000555178 TMEM11P17152 192 aa8.57□□□□□ -1.04
TDP1-211ENST00000555178 IER3P46695 156 aa8.57□□□□□ -1.04
TDP1-211ENST00000555178 EIF2B2P49770 351 aaKnown RBP8.57□□□□□ -1.04
TDP1-211ENST00000555178 UBE2KP61086 200 aa8.57□□□□□ -1.04
TDP1-211ENST00000555178 Q6ZS46 218 aa8.57□□□□□ -1.04
TDP1-211ENST00000555178 OR4A16Q8NH70 328 aa8.57□□□□□ -1.04
TDP1-211ENST00000555178 METTL1Q9UBP6 276 aaKnown RBP8.57□□□□□ -1.04
TDP1-211ENST00000555178 H3BP45 60 aa8.57□□□□□ -1.04
TDP1-211ENST00000555178 CRYGBP07316 175 aa8.57□□□□□ -1.04
TDP1-211ENST00000555178 SLC25A6P12236 298 aa8.57□□□□□ -1.04
TDP1-211ENST00000555178 SSBP2P81877 361 aaPredicted RBP8.57□□□□□ -1.04
TDP1-211ENST00000555178 CYCSP99999 105 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms