RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 LEPROTL1O95214 131 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 CD8AP01732 235 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 UBE2V2Q15819 145 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 DEGS2Q6QHC5 323 aa5.93□□□□□ -1.46
SYNE2-216ENST00000555002 LAMB2P55268 1798 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 A0A0U1RRA0 63 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 APOMO95445 188 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 CRHP06850 196 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 FBXL7Q9UJT9 491 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 OTOGLQ3ZCN5 2332 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 TRBV5-4A0A0C4DH59 114 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 A0A1B0GWB2 263 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 GRIFINA4D1Z8 144 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 RPL32P62910 135 aaKnown RBP5.92□□□□□ -1.46
SYNE2-216ENST00000555002 ZNF645Q8N7E2 425 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 FAM60AQ9NP50 221 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 TMEM127O75204 238 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 RPL35AP18077 110 aaKnown RBP5.92□□□□□ -1.46
SYNE2-216ENST00000555002 HOXD3P31249 432 aaPredicted RBP5.92□□□□□ -1.46
SYNE2-216ENST00000555002 ZNF385CQ66K41 422 aaPredicted RBP5.92□□□□□ -1.46
SYNE2-216ENST00000555002 CUL9Q8IWT3 2517 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 GBF1Q92538 1859 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 INS-IGF2F8WCM5 200 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 EDIL3O43854 480 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 INSP01308 110 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 LEPP41159 167 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 ACSF3Q4G176 576 aaPredicted RBP5.92□□□□□ -1.46
SYNE2-216ENST00000555002 TUBD1Q9UJT1 453 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 DOCK4Q8N1I0 1966 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 ATP6V0CP27449 155 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 NPC2P61916 151 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 OR11H4Q8NGC9 324 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 CTSSP25774 331 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 WDR82Q6UXN9 313 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 ABHD12Q8N2K0 398 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 C10orf111Q8N326 155 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 MGST3O14880 152 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 GPR183P32249 361 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 LSM6P62312 80 aaKnown RBP5.92□□□□□ -1.46
SYNE2-216ENST00000555002 LINC01555Q8NAE3 123 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 WFDC12Q8WWY7 111 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 SSBP3Q9BWW4 388 aaPredicted RBP5.92□□□□□ -1.46
SYNE2-216ENST00000555002 CHST5Q9GZS9 411 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 TMEM74BQ9NUR3 256 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 ARHGAP21Q5T5U3 1957 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 ODAMA1E959 279 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 FOXH1O75593 365 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 CTGFP29279 349 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 UCP2P55851 309 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 ERVK11-1P61568 191 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 ZNF48Q96MX3 618 aaPredicted RBP5.92□□□□□ -1.46
SYNE2-216ENST00000555002 DNAJC4Q9NNZ3 241 aa5.92□□□□□ -1.46
SYNE2-216ENST00000555002 PTPN13Q12923 2485 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 SUMO4Q6EEV6 95 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 LRTM2Q8N967 370 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 MS4A3Q96HJ5 214 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 GPHA2Q96T91 129 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 TRAF4Q9BUZ4 470 aaPredicted RBP5.91□□□□□ -1.46
SYNE2-216ENST00000555002 SLC25A2Q9BXI2 301 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.91□□□□□ -1.46
SYNE2-216ENST00000555002 PRR33A8MZF0 331 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 PLPP2O43688 288 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 TNFSF18Q9UNG2 199 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 USP54Q70EL1 1684 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 CDC42EP2O14613 210 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 OR2H2O95918 312 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 SMIM6P0DI80 62 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 C10orf35Q96D05 121 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 CHCHD5Q9BSY4 110 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 PTPRDP23468 1912 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 LIPFP07098 398 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 LINC00158P58513 81 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 LDLRAD2Q5SZI1 272 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 RTN4RL2Q86UN3 420 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 ZPLD1Q8TCW7 415 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 IGHV3-64A0A075B6Q5 118 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 HLA-DQA1P01909 254 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 GZMBP10144 247 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 P2RY6Q15077 328 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 FOXA2Q9Y261 457 aaPredicted RBP5.91□□□□□ -1.46
SYNE2-216ENST00000555002 MPV17P39210 176 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 SURF2Q15527 256 aaPredicted RBP5.91□□□□□ -1.46
SYNE2-216ENST00000555002 COLCA1Q6ZS62 124 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 PPP1R27Q86WC6 154 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 IGHV1-69-2A0A0G2JMI3 117 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 HMSDA8MTL9 139 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 SCTP09683 121 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 CLEC19AQ6UXS0 136 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 TMEM30AQ9NV96 361 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 KLK13Q9UKR3 277 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 SCN7AQ01118 1682 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 HOXD4P09016 255 aaPredicted RBP5.91□□□□□ -1.46
SYNE2-216ENST00000555002 CLPPQ16740 277 aaPredicted RBP5.91□□□□□ -1.46
SYNE2-216ENST00000555002 OR51G1Q8NGK1 321 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 CLDND2Q8NHS1 167 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 SLC25A15Q9Y619 301 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 IFNL4K9M1U5 179 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 PRB4P10163 310 aaPredicted RBP5.91□□□□□ -1.46
SYNE2-216ENST00000555002 ZNF562Q6V9R5 426 aa5.91□□□□□ -1.46
SYNE2-216ENST00000555002 CRYGNQ8WXF5 182 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms