RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 ADTRPQ96IZ2 230 aa7.24□□□□□ -1.25
TDP1-210ENST00000554976 QTRT1Q9BXR0 403 aaKnown RBP7.24□□□□□ -1.25
TDP1-210ENST00000554976 CHODLQ9H9P2 273 aa7.24□□□□□ -1.25
TDP1-210ENST00000554976 H0YJW9 148 aa7.24□□□□□ -1.25
TDP1-210ENST00000554976 RD3LP0DJH9 198 aa7.24□□□□□ -1.25
TDP1-210ENST00000554976 NFYBP25208 207 aa7.24□□□□□ -1.25
TDP1-210ENST00000554976 VDAC2P45880 294 aaPredicted RBP7.24□□□□□ -1.25
TDP1-210ENST00000554976 PAX2Q02962 417 aa7.24□□□□□ -1.25
TDP1-210ENST00000554976 WDR25Q64LD2 544 aaPredicted RBP7.24□□□□□ -1.25
TDP1-210ENST00000554976 LYG1Q8N1E2 194 aa7.24□□□□□ -1.25
TDP1-210ENST00000554976 ZNF843Q8N446 348 aa7.24□□□□□ -1.25
TDP1-210ENST00000554976 RNF141Q8WVD5 230 aa7.24□□□□□ -1.25
TDP1-210ENST00000554976 ZDHHC16Q969W1 377 aa7.24□□□□□ -1.25
TDP1-210ENST00000554976 ATP5SQ99766 215 aa7.24□□□□□ -1.25
TDP1-210ENST00000554976 HIPK2Q9H2X6 1198 aa7.24□□□□□ -1.25
TDP1-210ENST00000554976 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.24□□□□□ -1.25
TDP1-210ENST00000554976 TMEM14BQ9NUH8 114 aa7.24□□□□□ -1.25
TDP1-210ENST00000554976 SRRM4A7MD48 611 aaKnown RBP7.23□□□□□ -1.25
TDP1-210ENST00000554976 PRSS47A8MTI9 375 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 LY6LH3BQJ8 138 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 F12P00748 615 aaPredicted RBP7.23□□□□□ -1.25
TDP1-210ENST00000554976 TMEM267Q0VDI3 215 aaPredicted RBP7.23□□□□□ -1.25
TDP1-210ENST00000554976 ETV3LQ6ZN32 361 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 ZNF525Q8N782 197 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 OR1S2Q8NGQ3 325 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 OR5C1Q8NGR4 320 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 OR4S2Q8NH73 311 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 TMEM170AQ8WVE7 144 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 SAT2Q96F10 170 aaPredicted RBP7.23□□□□□ -1.25
TDP1-210ENST00000554976 SCRT1Q9BWW7 348 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 TMEM133Q9H2Q1 129 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 PSENENQ9NZ42 101 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 FOXA2Q9Y261 457 aaPredicted RBP7.23□□□□□ -1.25
TDP1-210ENST00000554976 RFNGQ9Y644 331 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 USF3Q68DE3 2245 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 C15orf61A6NNL5 157 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 COLCA2A8K830 154 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 C22orf46C9J442 243 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 IGLV2-23P01705 113 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 PRB1P04280 392 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 IGKV1-16P04430 117 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 IAPPP10997 89 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 EIF5AP63241 154 aaKnown RBP7.23□□□□□ -1.25
TDP1-210ENST00000554976 HCP5Q6MZN7 132 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 H2BFWTQ7Z2G1 175 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 THNSL2Q86YJ6 484 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 VKORC1L1Q8N0U8 176 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 H1FXQ92522 213 aaKnown RBP7.23□□□□□ -1.25
TDP1-210ENST00000554976 NEIL1Q96FI4 390 aaPredicted RBP7.23□□□□□ -1.25
TDP1-210ENST00000554976 RHOVQ96L33 236 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 S1PR3Q99500 378 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 NABP2Q9BQ15 211 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 MRPL20Q9BYC9 149 aaKnown RBP7.23□□□□□ -1.25
TDP1-210ENST00000554976 PATZ1Q9HBE1 687 aaKnown RBP7.23□□□□□ -1.25
TDP1-210ENST00000554976 TMEM140Q9NV12 185 aa7.23□□□□□ -1.25
TDP1-210ENST00000554976 OR8U8P0C7N1 319 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 NQO2P16083 231 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 ADCYAP1P18509 176 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 CAV2P51636 162 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 NUTF2P61970 127 aaKnown RBP7.22□□□□□ -1.25
TDP1-210ENST00000554976 RPP30P78346 268 aaKnown RBP7.22□□□□□ -1.25
TDP1-210ENST00000554976 PEA15Q15121 130 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 TMEM177Q53S58 311 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 CYB5R2Q6BCY4 276 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 OR4A47Q6IF82 309 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 TGIF2LXQ8IUE1 241 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 TNFRSF14Q92956 283 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 PCGF1Q9BSM1 259 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 PARP11Q9NR21 331 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 BTBD17A6NE02 478 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 C15orf62A8K5M9 175 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 FAM157AC9JC47 383 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 NDUFS7O75251 213 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 CST7O76096 145 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 PAX1P15863 534 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 RPL23AP62750 156 aaKnown RBP7.22□□□□□ -1.25
TDP1-210ENST00000554976 VAMP2P63027 116 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 TLE4Q04727 773 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 SAPCD1Q5SSQ6 148 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 C15orf54Q8N8G6 183 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 BEND2Q8NDZ0 799 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 OR9G1Q8NH87 305 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 PRDM13Q9H4Q3 707 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 CACFD1Q9UGQ2 172 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 IGHV2-26A0A0B4J1V2 119 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 H3BP45 60 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 CDKN1AP38936 164 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 CENPVQ7Z7K6 275 aaPredicted RBP7.22□□□□□ -1.25
TDP1-210ENST00000554976 OR8B3Q8NGG8 313 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 TMEM186Q96B77 213 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 OR8B2Q96RD0 313 aa7.22□□□□□ -1.25
TDP1-210ENST00000554976 UBR5O95071 2799 aaPredicted RBP7.21□□□□□ -1.25
TDP1-210ENST00000554976 ODF3BA8MYP8 253 aa7.21□□□□□ -1.25
TDP1-210ENST00000554976 MED6O75586 246 aa7.21□□□□□ -1.25
TDP1-210ENST00000554976 ATP6V0CP27449 155 aa7.21□□□□□ -1.25
TDP1-210ENST00000554976 DDTP30046 118 aa7.21□□□□□ -1.25
TDP1-210ENST00000554976 RAB5CP51148 216 aa7.21□□□□□ -1.25
TDP1-210ENST00000554976 OR2B8PP59922 312 aa7.21□□□□□ -1.25
TDP1-210ENST00000554976 ZNF266Q14584 549 aa7.21□□□□□ -1.25
TDP1-210ENST00000554976 BSXQ3C1V8 233 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms