RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 TRGV10A0A0A0MS01 117 aa13.95□□□□□ -0.18
PCNX1-209ENST00000554879 SPATA45Q537H7 98 aa13.95□□□□□ -0.18
PCNX1-209ENST00000554879 MIEN1Q9BRT3 115 aa13.95□□□□□ -0.18
PCNX1-209ENST00000554879 OR2W1Q9Y3N9 320 aa13.95□□□□□ -0.18
PCNX1-209ENST00000554879 ARL2-SNX15V9GYD0 113 aa13.95□□□□□ -0.18
PCNX1-209ENST00000554879 FAM90A10PA6NDY2 464 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 FAM90A18PA6NE21 464 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 FAM90A16PA6NEW6 464 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 FAM90A20PA6NIJ5 464 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 FAM90A8PA6NJQ4 464 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 FAM90A7PA6NKC0 464 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 FAM90A22PA8MWA6 464 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 FAM90A12PA8MX19 464 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 FAM90A5PA8MXJ8 464 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 FAM90A23PA8MXZ1 464 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 FAM90A15PP0C7V4 464 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 FAM90A13PP0C7W8 464 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 FAM90A14PP0C7W9 464 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 FAM90A24PP0C7X0 464 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 BSXQ3C1V8 233 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 KLHDC1Q8N7A1 406 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 OR5C1Q8NGR4 320 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 PROB1E7EW31 1015 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 ITGB1BP1O14713 200 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 CLDN1O95832 211 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 SEC11BP0C7V7 166 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 IAPPP10997 89 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 ATP6V0CP27449 155 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 TMEM241Q24JQ0 296 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 C16orf54Q6UWD8 224 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 DCTN5Q9BTE1 182 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 ENY2Q9NPA8 101 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 RFNGQ9Y644 331 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 DIRC3C9JPN6 131 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 IGKV3-15P01624 115 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 CFPP27918 469 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 MRPS11P82912 194 aaKnown RBP13.94□□□□□ -0.18
PCNX1-209ENST00000554879 LINC00596Q86U02 117 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 OR5AU1Q8NGC0 362 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 VAX2Q9UIW0 290 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 WASHC3Q9Y3C0 194 aa13.94□□□□□ -0.18
PCNX1-209ENST00000554879 TRAV24A0A0B4J272 114 aa13.93□□□□□ -0.18
PCNX1-209ENST00000554879 DANCRP0C864 163 aa13.93□□□□□ -0.18
PCNX1-209ENST00000554879 COX5AP20674 150 aa13.93□□□□□ -0.18
PCNX1-209ENST00000554879 CISD1Q9NZ45 108 aaKnown RBP13.93□□□□□ -0.18
PCNX1-209ENST00000554879 M0R1X1 148 aa13.93□□□□□ -0.18
PCNX1-209ENST00000554879 LIAT1Q6ZQX7 453 aa13.93□□□□□ -0.18
PCNX1-209ENST00000554879 KIAA1324LA8MWY0 1029 aaPredicted RBP13.93□□□□□ -0.18
PCNX1-209ENST00000554879 BRS3P32247 399 aa13.93□□□□□ -0.18
PCNX1-209ENST00000554879 PLPPR1Q8TBJ4 325 aa13.93□□□□□ -0.18
PCNX1-209ENST00000554879 RTBDNQ9BSG5 229 aaPredicted RBP13.93□□□□□ -0.18
PCNX1-209ENST00000554879 MEGF9Q9H1U4 602 aa13.93□□□□□ -0.18
PCNX1-209ENST00000554879 HBZP02008 142 aa13.92□□□□□ -0.18
PCNX1-209ENST00000554879 RPS16P62249 146 aaKnown RBP13.92□□□□□ -0.18
PCNX1-209ENST00000554879 ZNF90Q03938 601 aa13.92□□□□□ -0.18
PCNX1-209ENST00000554879 MSMO1Q15800 293 aa13.92□□□□□ -0.18
PCNX1-209ENST00000554879 LIN7CQ9NUP9 197 aaKnown RBP13.92□□□□□ -0.18
PCNX1-209ENST00000554879 MLNRO43193 412 aa13.92□□□□□ -0.18
PCNX1-209ENST00000554879 SSTR5P35346 364 aa13.92□□□□□ -0.18
PCNX1-209ENST00000554879 FBLN7Q53RD9 439 aa13.92□□□□□ -0.18
PCNX1-209ENST00000554879 OOEPA6NGQ2 149 aa13.92□□□□□ -0.18
PCNX1-209ENST00000554879 GOSR1O95249 250 aa13.92□□□□□ -0.18
PCNX1-209ENST00000554879 MOB3AQ96BX8 217 aa13.92□□□□□ -0.18
PCNX1-209ENST00000554879 SERTAD4Q9NUC0 356 aa13.92□□□□□ -0.18
PCNX1-209ENST00000554879 C1orf194Q5T5A4 169 aa13.91□□□□□ -0.18
PCNX1-209ENST00000554879 ACP7Q6ZNF0 438 aa13.91□□□□□ -0.18
PCNX1-209ENST00000554879 C1orf174Q8IYL3 243 aa13.91□□□□□ -0.18
PCNX1-209ENST00000554879 LYG1Q8N1E2 194 aa13.91□□□□□ -0.18
PCNX1-209ENST00000554879 ABHD14BQ96IU4 210 aa13.91□□□□□ -0.18
PCNX1-209ENST00000554879 ELOVL5Q9NYP7 299 aa13.91□□□□□ -0.18
PCNX1-209ENST00000554879 OR8G2PQ6IF36 304 aa13.91□□□□□ -0.18
PCNX1-209ENST00000554879 WDR82Q6UXN9 313 aa13.91□□□□□ -0.18
PCNX1-209ENST00000554879 SEM1Q6ZVN7 128 aa13.91□□□□□ -0.18
PCNX1-209ENST00000554879 H2BFWTQ7Z2G1 175 aa13.91□□□□□ -0.18
PCNX1-209ENST00000554879 ENSAO43768 121 aaKnown RBP13.91□□□□□ -0.18
PCNX1-209ENST00000554879 MT-CO2P00403 227 aa13.91□□□□□ -0.18
PCNX1-209ENST00000554879 LYPD6Q86Y78 171 aa13.91□□□□□ -0.18
PCNX1-209ENST00000554879 WNT10AQ9GZT5 417 aa13.91□□□□□ -0.18
PCNX1-209ENST00000554879 ZNF665Q9H7R5 613 aa13.91□□□□□ -0.18
PCNX1-209ENST00000554879 SLC35D1Q9NTN3 355 aa13.91□□□□□ -0.18
PCNX1-209ENST00000554879 TMEM238C9JI98 176 aa13.91□□□□□ -0.18
PCNX1-209ENST00000554879 NDUFB3O43676 98 aa13.91□□□□□ -0.18
PCNX1-209ENST00000554879 CRISP2P16562 243 aa13.91□□□□□ -0.18
PCNX1-209ENST00000554879 PSMB3P49720 205 aa13.91□□□□□ -0.18
PCNX1-209ENST00000554879 UBE2G2P60604 165 aa13.91□□□□□ -0.18
PCNX1-209ENST00000554879 SPANXN5Q5MJ07 72 aa13.91□□□□□ -0.18
PCNX1-209ENST00000554879 ZNF818PQ6ZRF7 136 aa13.91□□□□□ -0.18
PCNX1-209ENST00000554879 LEAP2Q969E1 77 aa13.91□□□□□ -0.18
PCNX1-209ENST00000554879 ACTR3CQ9C0K3 210 aaPredicted RBP13.91□□□□□ -0.18
PCNX1-209ENST00000554879 PIGBOS1A0A0B4J2F0 54 aa13.9□□□□□ -0.18
PCNX1-209ENST00000554879 PSG2P11465 335 aa13.9□□□□□ -0.18
PCNX1-209ENST00000554879 IZUMO4Q1ZYL8 232 aa13.9□□□□□ -0.18
PCNX1-209ENST00000554879 TPTE2P1Q5T6R2 138 aa13.9□□□□□ -0.18
PCNX1-209ENST00000554879 MS4A5Q9H3V2 200 aa13.9□□□□□ -0.18
PCNX1-209ENST00000554879 NCOR1P1Q9H4R4 102 aa13.9□□□□□ -0.18
PCNX1-209ENST00000554879 MDFIC2A0A1B0GVS7 189 aa13.9□□□□□ -0.18
PCNX1-209ENST00000554879 P2RY1P47900 373 aa13.9□□□□□ -0.18
PCNX1-209ENST00000554879 TCTEX1D1Q8N7M0 179 aa13.9□□□□□ -0.18
PCNX1-209ENST00000554879 MRGPRFQ96AM1 343 aa13.9□□□□□ -0.18
PCNX1-209ENST00000554879 ZFYVE26Q68DK2 2539 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms