RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 FAM120AOSQ5T036 256 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 GPR157Q5UAW9 335 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 TMEM268Q5VZI3 342 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 FAM71F2Q6NXP2 309 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 LPCAT3Q6P1A2 487 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 BRD3OSQ6XYD6 125 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 ZNF833PQ6ZTB9 187 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 IL17RELQ6ZVW7 336 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 SLC38A6Q8IZM9 456 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-212ENST00000554486 ADAD2Q8NCV1 583 aaKnown RBP5.04□□□□□ -1.6
SCFD1-212ENST00000554486 NANPQ8TBE9 248 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 ENKURQ8TC29 256 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 ZFAND1Q8TCF1 268 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 TMEM230Q96A57 120 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 RNF125Q96EQ8 232 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 MRPL20Q9BYC9 149 aaKnown RBP5.04□□□□□ -1.6
SCFD1-212ENST00000554486 C20orf85Q9H1P6 137 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 DPAGT1Q9H3H5 408 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 C5orf66Q9H5L9 145 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 PIPOXQ9P0Z9 390 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 NUP50Q9UKX7 468 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 TBL2Q9Y4P3 447 aaKnown RBP5.04□□□□□ -1.6
SCFD1-212ENST00000554486 AMMECR1Q9Y4X0 333 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-212ENST00000554486 NIPBLQ6KC79 2804 aaeCLIP5.03□□□□□ -1.6
SCFD1-212ENST00000554486 TNCP24821 2201 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 TRAV6A0A075B6T7 132 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 A0A0U1RQK1 487 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 A0A1W2PPI3 338 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 LEUTXA8MZ59 168 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 J3KRW8 73 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 M0R1X1 148 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 TNFSF12O43508 249 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 IFNA2P01563 188 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 RLN1P04808 185 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 CT45A6P0DMU7 189 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 CT45A5P0DMU8 189 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 CT45A7P0DMV0 189 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 DUTP33316 252 aaKnown RBP5.03□□□□□ -1.6
SCFD1-212ENST00000554486 PIGPP57054 158 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 BRWD1-AS2P59051 145 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 ZNF816Q0VGE8 651 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-212ENST00000554486 OXA1LQ15070 435 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 RGS21Q2M5E4 152 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 CCBE1Q6UXH8 406 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-212ENST00000554486 GLDNQ6ZMI3 551 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-212ENST00000554486 C9orf139Q6ZV77 190 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 TMED4Q7Z7H5 227 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 TBC1D26Q86UD7 250 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 SLC25A42Q86VD7 318 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 ZNF383Q8NA42 475 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 DRAXINQ8NBI3 349 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-212ENST00000554486 CHPT1Q8WUD6 406 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 CAPSLQ8WWF8 208 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 RTN4IP1Q8WWV3 396 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-212ENST00000554486 RPEQ96AT9 228 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 RBMXL1Q96E39 390 aaKnown RBP5.03□□□□□ -1.6
SCFD1-212ENST00000554486 MALSU1Q96EH3 234 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 ZNF486Q96H40 463 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-212ENST00000554486 AKR1E2Q96JD6 320 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 SCGB3A2Q96PL1 93 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 NABP2Q9BQ15 211 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 MARVELD1Q9BSK0 173 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 GHITMQ9H3K2 345 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 SLC2A9Q9NRM0 540 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 NUDT15Q9NV35 164 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 COPZ2Q9P299 210 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 C14orf166Q9Y224 244 aaKnown RBP5.03□□□□□ -1.6
SCFD1-212ENST00000554486 HILPDAQ9Y5L2 63 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 NUBP2Q9Y5Y2 271 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 PLXNB1O43157 2135 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 NF1P21359 2839 aa5.03□□□□□ -1.6
SCFD1-212ENST00000554486 IGHV3-72A0A0B4J1Y9 119 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 IGHV1-3A0A0C4DH29 117 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 MDFIC2A0A1B0GVS7 189 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 CBY3A6NI87 242 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 CRYM-AS1A6NIL9 109 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 OOSP1A8MZH6 123 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 H0YJW9 148 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 TIMM23O14925 209 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 GAPDHP04406 335 aaKnown RBP5.02□□□□□ -1.61
SCFD1-212ENST00000554486 AKR1C4P17516 323 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 ANXA7P20073 488 aaKnown RBP5.02□□□□□ -1.61
SCFD1-212ENST00000554486 CEACAM3P40198 252 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 RAG2P55895 527 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 RAB25P57735 213 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 BPIFB3P59826 476 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 SUPT4H1P63272 117 aaKnown RBP5.02□□□□□ -1.61
SCFD1-212ENST00000554486 DHODHQ02127 395 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 PPP1R1AQ13522 171 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 SSX2Q16385 188 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 DEFB112Q30KQ8 113 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 ABCA11PQ4W5N1 156 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 PXDC1Q5TGL8 231 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 PLET1Q6UQ28 207 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 Q71RC1 249 aaPredicted RBP5.02□□□□□ -1.61
SCFD1-212ENST00000554486 TGIF2LXQ8IUE1 241 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 CMTM1Q8IZ96 169 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 OR8H3Q8N146 312 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 CENPSQ8N2Z9 138 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms