RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 ZNF140P52738 457 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-225ENST00000554214 HIST1H2BDP58876 126 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 RAB10P61026 200 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 RHOBP62745 196 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 HIST1H2BCP62807 126 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 PAFAH1B2P68402 229 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 HSD52Q0P140 79 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 SMAGPQ0VAQ4 97 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 EDDM3AQ14507 147 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 SSX1Q16384 188 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 HIST3H3Q16695 136 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 HIST2H2BEQ16778 126 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 CDO1Q16878 200 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 GSG1Q2KHT4 349 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 TMEM97Q5BJF2 176 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 LRRC10Q5BKY1 277 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-225ENST00000554214 DCST2Q5T1A1 773 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 DCAF12Q5T6F0 453 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 C1orf189Q5VU69 101 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 ASPHD2Q6ICH7 369 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 C22orf39Q6P5X5 142 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 ZNF621Q6ZSS3 439 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 FAM71E2Q8N5Q1 922 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 FAM24BQ8N5W8 94 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 OCC1Q8TAD7 63 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 NEIL3Q8TAT5 605 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 Q8WTZ3 238 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 HIST1H2BHQ93079 126 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 SLC25A46Q96AG3 418 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 C8orf44Q96CB5 159 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 WDR34Q96EX3 536 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 IMP4Q96G21 291 aaKnown RBP3.54□□□□□ -1.84
ATXN3-225ENST00000554214 OR10C1Q96KK4 312 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 DNAJC30Q96LL9 226 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 TSSK2Q96PF2 358 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 GPER1Q99527 375 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 HIST1H2BNQ99877 126 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 HIST1H2BMQ99879 126 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 HSPB9Q9BQS6 159 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 DOHHQ9BU89 302 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 TAPBPLQ9BX59 468 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 OR11A1Q9GZK7 315 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 SIRPDQ9H106 197 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 NXF5Q9H1B4 397 aaKnown RBP3.54□□□□□ -1.84
ATXN3-225ENST00000554214 LPAR5Q9H1C0 372 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 OR51I1Q9H343 314 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 RNF167Q9H6Y7 350 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 ELL3Q9HB65 397 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-225ENST00000554214 ACP6Q9NPH0 428 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 EXOSC3Q9NQT5 275 aaKnown RBP3.54□□□□□ -1.84
ATXN3-225ENST00000554214 TMEM100Q9NV29 134 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 DMAC2Q9NW81 257 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 OR1A1Q9P1Q5 309 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 MARCOQ9UEW3 520 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-225ENST00000554214 CACFD1Q9UGQ2 172 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 TNFSF18Q9UNG2 199 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 NTNG1Q9Y2I2 539 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 LAMTOR2Q9Y2Q5 125 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 VPS13CQ709C8 3753 aa3.54□□□□□ -1.84
ATXN3-225ENST00000554214 A0A0G2JMM0 328 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 A0A1B0GTH9 108 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 A0A1W2PPB8 328 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 A0A1W2PRD5 423 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 LRP5LA4QPB2 252 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 MAP1LC3B2A6NCE7 125 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 KIR3DP1A8MWS1 328 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 B4DEV8 164 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 ZNF732B4DXR9 585 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 C15orf65H3BRN8 121 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 M0R2Z0 102 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 DCTN6O00399 190 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 HMGB3O15347 200 aaKnown RBP3.53□□□□□ -1.84
ATXN3-225ENST00000554214 CREBL2O60519 120 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-225ENST00000554214 EIF4E2O60573 245 aaKnown RBP3.53□□□□□ -1.84
ATXN3-225ENST00000554214 FCGR3BO75015 233 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 OR2J3O76001 311 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 CD160O95971 181 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 TNFP01375 233 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 FGF1P05230 155 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 MMP7P09237 267 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-225ENST00000554214 LAMP1P11279 417 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 TPT1P13693 172 aaKnown RBP3.53□□□□□ -1.84
ATXN3-225ENST00000554214 CXCL3P19876 107 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 KLK2P20151 261 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 GABRA3P34903 492 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 GUCA1AP43080 201 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-225ENST00000554214 DAP3P51398 398 aaKnown RBP3.53□□□□□ -1.84
ATXN3-225ENST00000554214 GPM6AP51674 278 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 HNRNPA3P51991 378 aaKnown RBP3.53□□□□□ -1.84
ATXN3-225ENST00000554214 DLX6P56179 175 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 RHOAP61586 193 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 PLCXD2Q0VAA5 305 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 TMEM267Q0VDI3 215 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-225ENST00000554214 PMVKQ15126 192 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 ELOCQ15369 112 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 OR1Q1Q15612 314 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 SLC25A52Q3SY17 297 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 ATP6AP1LQ52LC2 224 aa3.53□□□□□ -1.84
ATXN3-225ENST00000554214 SPANXN3Q5MJ09 141 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms