RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 UBE2KP61086 200 aa9.43□□□□□ -0.9
NEK9-202ENST00000553823 RAB32Q13637 225 aa9.43□□□□□ -0.9
NEK9-202ENST00000553823 EBI3Q14213 229 aa9.43□□□□□ -0.9
NEK9-202ENST00000553823 HNF4GQ14541 408 aa9.43□□□□□ -0.9
NEK9-202ENST00000553823 VMA21Q3ZAQ7 101 aa9.43□□□□□ -0.9
NEK9-202ENST00000553823 CXorf66Q5JRM2 361 aaPredicted RBP9.43□□□□□ -0.9
NEK9-202ENST00000553823 THNSL2Q86YJ6 484 aa9.43□□□□□ -0.9
NEK9-202ENST00000553823 PUSL1Q8N0Z8 303 aaKnown RBP9.43□□□□□ -0.9
NEK9-202ENST00000553823 OR4A16Q8NH70 328 aa9.43□□□□□ -0.9
NEK9-202ENST00000553823 VSTM2AQ8TAG5 236 aa9.43□□□□□ -0.9
NEK9-202ENST00000553823 EAF1Q96JC9 268 aaPredicted RBP9.43□□□□□ -0.9
NEK9-202ENST00000553823 NSG2Q9Y328 171 aa9.43□□□□□ -0.9
NEK9-202ENST00000553823 HIVEP2P31629 2446 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 TRAV14DV4A0A0A6YYC5 116 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 TRAV3A0A0B4J244 114 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 FAM90A26D6RGX4 464 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 BOLA2-SMG1P6H3BVE0 249 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 UPK2O00526 184 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 ST8SIA3O43173 380 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 SLC25A17O43808 307 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 KBTBD11O94819 623 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 SPDEFO95238 335 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 PET100P0DJ07 73 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 CNTFRP26992 372 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 DYNLT3P51808 116 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 RELBQ01201 579 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 ID3Q02535 119 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 PSG5Q15238 335 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 FAM120AOSQ5T036 256 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 SPNS3Q6ZMD2 512 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 NOXA1Q86UR1 476 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 FOXRED2Q8IWF2 684 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 TEX45Q8NA69 505 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 OR4A5Q8NH83 315 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 THAP6Q8TBB0 222 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 TMEM167AQ8TBQ9 72 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 YAE1D1Q9NRH1 226 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 CACFD1Q9UGQ2 172 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 PRNDQ9UKY0 176 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 LSM5Q9Y4Y9 91 aaKnown RBP9.42□□□□□ -0.9
NEK9-202ENST00000553823 SOX21Q9Y651 276 aaPredicted RBP9.42□□□□□ -0.9
NEK9-202ENST00000553823 POMT1Q9Y6A1 747 aa9.42□□□□□ -0.9
NEK9-202ENST00000553823 C15orf61A6NNL5 157 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 K7EPK0 472 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 WRBO00258 174 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 NXPH3O95157 252 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 RLN2P04090 185 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 CRYGBP07316 175 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 SLC25A4P12235 298 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 TMEM11P17152 192 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 OR2B8PP59922 312 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 MMDQ15546 238 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 AANATQ16613 207 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 LRRC75BQ2VPJ9 315 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 AARDQ4LEZ3 155 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 C11orf87Q6NUJ2 197 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 C9orf139Q6ZV77 190 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 ZNF429Q86V71 674 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 BCL6BQ8N143 479 aaPredicted RBP9.41□□□□□ -0.9
NEK9-202ENST00000553823 FAM71E2Q8N5Q1 922 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 Q8N6K4 173 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 NPBQ8NG41 125 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 HYLS1Q96M11 299 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 SSX3Q99909 188 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 QTRT1Q9BXR0 403 aaKnown RBP9.41□□□□□ -0.9
NEK9-202ENST00000553823 FKBP11Q9NYL4 201 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 KIAA1456Q9P272 454 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 FOXA2Q9Y261 457 aaPredicted RBP9.41□□□□□ -0.9
NEK9-202ENST00000553823 MTORP42345 2549 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 OTOGQ6ZRI0 2925 aa9.41□□□□□ -0.9
NEK9-202ENST00000553823 FXYD6-FXYD2A0A087WZ82 144 aa9.4□□□□□ -0.9
NEK9-202ENST00000553823 H0YIZ8 118 aa9.4□□□□□ -0.9
NEK9-202ENST00000553823 RRHO14718 337 aa9.4□□□□□ -0.9
NEK9-202ENST00000553823 NBR2O15453 112 aa9.4□□□□□ -0.9
NEK9-202ENST00000553823 MED6O75586 246 aa9.4□□□□□ -0.9
NEK9-202ENST00000553823 DEDDO75618 318 aa9.4□□□□□ -0.9
NEK9-202ENST00000553823 NDUFA3O95167 84 aa9.4□□□□□ -0.9
NEK9-202ENST00000553823 LYL1P12980 280 aa9.4□□□□□ -0.9
NEK9-202ENST00000553823 EIF2B2P49770 351 aaKnown RBP9.4□□□□□ -0.9
NEK9-202ENST00000553823 F2RL1P55085 397 aa9.4□□□□□ -0.9
NEK9-202ENST00000553823 POLR2GP62487 172 aaKnown RBP eCLIP9.4□□□□□ -0.9
NEK9-202ENST00000553823 RPL8P62917 257 aaKnown RBP9.4□□□□□ -0.9
NEK9-202ENST00000553823 TNFRSF9Q07011 255 aa9.4□□□□□ -0.9
NEK9-202ENST00000553823 DEFB112Q30KQ8 113 aa9.4□□□□□ -0.9
NEK9-202ENST00000553823 FBLN7Q53RD9 439 aa9.4□□□□□ -0.9
NEK9-202ENST00000553823 PRSS54Q6PEW0 395 aa9.4□□□□□ -0.9
NEK9-202ENST00000553823 OR11H4Q8NGC9 324 aa9.4□□□□□ -0.9
NEK9-202ENST00000553823 OR52E5Q8NH55 327 aa9.4□□□□□ -0.9
NEK9-202ENST00000553823 RNF126Q9BV68 326 aa9.4□□□□□ -0.9
NEK9-202ENST00000553823 MAGT1Q9H0U3 335 aa9.4□□□□□ -0.9
NEK9-202ENST00000553823 FBXL15Q9H469 300 aa9.4□□□□□ -0.9
NEK9-202ENST00000553823 TMEM14BQ9NUH8 114 aa9.4□□□□□ -0.9
NEK9-202ENST00000553823 MBD2Q9UBB5 411 aa9.4□□□□□ -0.9
NEK9-202ENST00000553823 METTL1Q9UBP6 276 aaKnown RBP9.4□□□□□ -0.9
NEK9-202ENST00000553823 HSPB7Q9UBY9 170 aa9.4□□□□□ -0.9
NEK9-202ENST00000553823 RCL1Q9Y2P8 373 aaKnown RBP9.4□□□□□ -0.9
NEK9-202ENST00000553823 SIGLEC9Q9Y336 463 aa9.4□□□□□ -0.9
NEK9-202ENST00000553823 NCBP2LA6PVI3 153 aaKnown RBP9.39□□□□□ -0.91
NEK9-202ENST00000553823 HMSDA8MTL9 139 aa9.39□□□□□ -0.91
NEK9-202ENST00000553823 SYNGR2O43760 224 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 195.5 ms