RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 ANKRD55Q3KP44 614 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 RPL39P5Q59GN2 51 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 TPTE2P1Q5T6R2 138 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 GGNBP1Q5YKI7 109 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 H2BFWTQ7Z2G1 175 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 MOB3BQ86TA1 216 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 THNSL2Q86YJ6 484 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 PDPNQ86YL7 162 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 ODF3L1Q8IXM7 274 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 DMBX1Q8NFW5 382 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 VSTM2AQ8TAG5 236 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 OSR1Q8TAX0 266 aaPredicted RBP4.05□□□□□ -1.76
VTI1B-202ENST00000553619 THAP6Q8TBB0 222 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 NANPQ8TBE9 248 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 ST6GALNAC6Q969X2 333 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 MSI2Q96DH6 328 aaKnown RBP4.05□□□□□ -1.76
VTI1B-202ENST00000553619 C18orf12Q96KH6 178 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 OR2A7Q96R45 310 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 TP53RKQ96S44 253 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 TBX15Q96SF7 602 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 PARP12Q9H0J9 701 aaKnown RBP4.05□□□□□ -1.76
VTI1B-202ENST00000553619 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.05□□□□□ -1.76
VTI1B-202ENST00000553619 FKBP11Q9NYL4 201 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 C1RLQ9NZP8 487 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 WASHC3Q9Y3C0 194 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 FAM96BQ9Y3D0 163 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 MMP24Q9Y5R2 645 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 NAV2Q8IVL1 2488 aa4.05□□□□□ -1.76
VTI1B-202ENST00000553619 USP9XQ93008 2570 aaPredicted RBP4.05□□□□□ -1.76
VTI1B-202ENST00000553619 BOD1L1Q8NFC6 3051 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 A0A096LNT2 108 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 A0A0B4J293 547 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 IGHV1-69DA0A0B4J2H0 117 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 IGHV1-3A0A0C4DH29 117 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 CENPVL3A0A0U1RRI6 287 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 LOC105371267A0A1B0GV96 52 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 LINC00473A8K010 186 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 ODF3BA8MYP8 253 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 FAM90A26D6RGX4 464 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 RNASEK-C17orf49H0YIS7 233 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 LY6LH3BQJ8 138 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 WRBO00258 174 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 NPFFO15130 113 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 PROP1O75360 226 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 RBMXL2O75526 392 aaKnown RBP4.04□□□□□ -1.76
VTI1B-202ENST00000553619 CRYZL1O95825 349 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 KRASP01116 189 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 IGHV1-69P01742 117 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 FAM106CPP0CH98 169 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 BTF3P20290 206 aaKnown RBP4.04□□□□□ -1.76
VTI1B-202ENST00000553619 C4BPBP20851 252 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 RPL30P62888 115 aaKnown RBP4.04□□□□□ -1.76
VTI1B-202ENST00000553619 RPP30P78346 268 aaKnown RBP4.04□□□□□ -1.76
VTI1B-202ENST00000553619 RELQ04864 619 aaPredicted RBP4.04□□□□□ -1.76
VTI1B-202ENST00000553619 SCGB2A2Q13296 93 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 IAH1Q2TAA2 248 aaPredicted RBP4.04□□□□□ -1.76
VTI1B-202ENST00000553619 VMA21Q3ZAQ7 101 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 ZNF585BQ52M93 769 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 FAM53AQ6NSI3 398 aaPredicted RBP4.04□□□□□ -1.76
VTI1B-202ENST00000553619 LYZL2Q7Z4W2 148 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 TCTE3Q8IZS6 198 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 SLC35G3Q8N808 338 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 ZNF383Q8NA42 475 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 CLRN3Q8NCR9 226 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 OR4P4Q8NGL7 312 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 OR5M8Q8NGP6 311 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 OR2T10Q8NGZ9 312 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 OR4A16Q8NH70 328 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 OR4A5Q8NH83 315 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 OR1S1Q8NH92 325 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 DDB2Q92466 427 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 R3HDM4Q96D70 268 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 HYLS1Q96M11 299 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 CLCC1Q96S66 551 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 TSNAXQ99598 290 aaKnown RBP4.04□□□□□ -1.76
VTI1B-202ENST00000553619 NABP2Q9BQ15 211 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 ZNF251Q9BRH9 671 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 MS4A7Q9GZW8 240 aaPredicted RBP4.04□□□□□ -1.76
VTI1B-202ENST00000553619 TMEM140Q9NV12 185 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 COA4Q9NYJ1 87 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 GSKIPQ9P0R6 139 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 KIAA1456Q9P272 454 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 SPG11Q96JI7 2443 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 ZZEF1O43149 2961 aa4.04□□□□□ -1.76
VTI1B-202ENST00000553619 MED13LQ71F56 2210 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 PRRC2AP48634 2157 aaKnown RBP4.03□□□□□ -1.76
VTI1B-202ENST00000553619 SPENQ96T58 3664 aaKnown RBP4.03□□□□□ -1.76
VTI1B-202ENST00000553619 MARCH11A6NNE9 402 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 H0YJW9 148 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 L7N2F9 121 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 ST8SIA3O43173 380 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 ADAP1O75689 374 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 SIX6O95475 246 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 MOSP00540 346 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 C1QBP02746 253 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 SNRNP70P08621 437 aaKnown RBP4.03□□□□□ -1.76
VTI1B-202ENST00000553619 FGF2P09038 288 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 FBP1P09467 338 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 HNF1AP20823 631 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 PSMB6P28072 239 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms