RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 SETD6Q8TBK2 473 aa5.37□□□□□ -1.55
ATXN3-219ENST00000553488 PYDC1Q8WXC3 89 aa5.37□□□□□ -1.55
ATXN3-219ENST00000553488 RNF183Q96D59 192 aa5.37□□□□□ -1.55
ATXN3-219ENST00000553488 PHB2Q99623 299 aa5.37□□□□□ -1.55
ATXN3-219ENST00000553488 CHMP1AQ9HD42 196 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-219ENST00000553488 Q9N2K0 584 aa5.37□□□□□ -1.55
ATXN3-219ENST00000553488 SDHAF2Q9NX18 166 aa5.37□□□□□ -1.55
ATXN3-219ENST00000553488 RDH8Q9NYR8 311 aa5.37□□□□□ -1.55
ATXN3-219ENST00000553488 AK3Q9UIJ7 227 aa5.37□□□□□ -1.55
ATXN3-219ENST00000553488 ZNF221Q9UK13 617 aa5.37□□□□□ -1.55
ATXN3-219ENST00000553488 DIMT1Q9UNQ2 313 aaKnown RBP5.37□□□□□ -1.55
ATXN3-219ENST00000553488 TMEM14DPA8MWL7 114 aa5.36□□□□□ -1.55
ATXN3-219ENST00000553488 GGCTO75223 188 aaKnown RBP5.36□□□□□ -1.55
ATXN3-219ENST00000553488 OR2J3O76001 311 aa5.36□□□□□ -1.55
ATXN3-219ENST00000553488 OR2C1O95371 312 aa5.36□□□□□ -1.55
ATXN3-219ENST00000553488 APOC4P55056 127 aa5.36□□□□□ -1.55
ATXN3-219ENST00000553488 UBE2KP61086 200 aa5.36□□□□□ -1.55
ATXN3-219ENST00000553488 RAP2BP61225 183 aa5.36□□□□□ -1.55
ATXN3-219ENST00000553488 KLK9Q2XQG4 91 aa5.36□□□□□ -1.55
ATXN3-219ENST00000553488 ODF3L2Q3SX64 289 aa5.36□□□□□ -1.55
ATXN3-219ENST00000553488 C1orf100Q5SVJ3 147 aa5.36□□□□□ -1.55
ATXN3-219ENST00000553488 BTNL8Q6UX41 500 aa5.36□□□□□ -1.55
ATXN3-219ENST00000553488 IDO2Q6ZQW0 420 aa5.36□□□□□ -1.55
ATXN3-219ENST00000553488 CEACAM19Q7Z692 300 aa5.36□□□□□ -1.55
ATXN3-219ENST00000553488 TTC9CQ8N5M4 171 aa5.36□□□□□ -1.55
ATXN3-219ENST00000553488 TEX45Q8NA69 505 aa5.36□□□□□ -1.55
ATXN3-219ENST00000553488 THRSPQ92748 146 aa5.36□□□□□ -1.55
ATXN3-219ENST00000553488 GGHQ92820 318 aa5.36□□□□□ -1.55
ATXN3-219ENST00000553488 LPAR5Q9H1C0 372 aa5.36□□□□□ -1.55
ATXN3-219ENST00000553488 OR2D2Q9H210 308 aa5.36□□□□□ -1.55
ATXN3-219ENST00000553488 RIMS4Q9H426 269 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-219ENST00000553488 KLK9Q9UKQ9 250 aa5.36□□□□□ -1.55
ATXN3-219ENST00000553488 EXOSC1Q9Y3B2 195 aaKnown RBP5.36□□□□□ -1.55
ATXN3-219ENST00000553488 DNAH5Q8TE73 4624 aa5.36□□□□□ -1.55
ATXN3-219ENST00000553488 TRAV25A0A0B4J276 109 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 KIR2DL5BA0A0G2JN68 375 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 KIR2DL5BA0A0G2JPC4 375 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 PNMA8CA0A1B0GUJ8 204 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 LOC100130705A0A1B0GUX0 176 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 A0A1B0GW64 132 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 LINC00473A8K010 186 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 TEX22C9J3V5 150 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 UBE2CO00762 179 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 MPPED1O15442 326 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 SOCS1O15524 211 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 S1PR2O95136 353 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 CD1AP06126 327 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 SAA1P0DJI8 122 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-219ENST00000553488 C8orf88P0DMB2 117 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 CD37P11049 281 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 CTRB1P17538 263 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 SRMP19623 302 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 ARL3P36405 182 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 FOXI1Q12951 378 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 INSL4Q14641 139 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 ANKRD55Q3KP44 614 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 VMA21Q3ZAQ7 101 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 CTRB2Q6GPI1 263 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 UNQ9165/PRO28630Q6UXU0 137 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 LRRTM1Q86UE6 522 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 KIR2DL5AQ8N109 375 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 TMEM217Q8N7C4 229 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 UXS1Q8NBZ7 420 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 OR1L6Q8NGR2 347 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 KIR2DL5BQ8NHK3 375 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 ACOT12Q8WYK0 555 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 CABLES2Q9BTV7 478 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 ZNF430Q9H8G1 570 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-219ENST00000553488 C12orf4Q9NQ89 552 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 PLEKHJ1Q9NW61 149 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 MGAT4AQ9UM21 535 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 ZNF257Q9Y2Q1 563 aa5.35□□□□□ -1.55
ATXN3-219ENST00000553488 NPIPB5A8MRT5 1133 aa5.34□□□□□ -1.55
ATXN3-219ENST00000553488 CRYZL1O95825 349 aa5.34□□□□□ -1.55
ATXN3-219ENST00000553488 IGHV3-23P01764 117 aa5.34□□□□□ -1.55
ATXN3-219ENST00000553488 CD3GP09693 182 aa5.34□□□□□ -1.55
ATXN3-219ENST00000553488 RRASP10301 218 aa5.34□□□□□ -1.55
ATXN3-219ENST00000553488 MYL12AP19105 171 aa5.34□□□□□ -1.55
ATXN3-219ENST00000553488 MAPK3P27361 379 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-219ENST00000553488 FCGR2BP31994 310 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-219ENST00000553488 DUTP33316 252 aaKnown RBP5.34□□□□□ -1.55
ATXN3-219ENST00000553488 TMEM50BP56557 158 aa5.34□□□□□ -1.55
ATXN3-219ENST00000553488 NANOS2P60321 138 aaKnown RBP5.34□□□□□ -1.55
ATXN3-219ENST00000553488 CDK10Q15131 360 aa5.34□□□□□ -1.55
ATXN3-219ENST00000553488 RTL8BQ17RB0 113 aa5.34□□□□□ -1.55
ATXN3-219ENST00000553488 GLT8D1Q68CQ7 371 aa5.34□□□□□ -1.55
ATXN3-219ENST00000553488 CLEC19AQ6UXS0 136 aa5.34□□□□□ -1.55
ATXN3-219ENST00000553488 FAM89BQ8N5H3 189 aa5.34□□□□□ -1.55
ATXN3-219ENST00000553488 OSR1Q8TAX0 266 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-219ENST00000553488 SPIN2AQ99865 258 aa5.34□□□□□ -1.55
ATXN3-219ENST00000553488 SPAG8Q99932 426 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-219ENST00000553488 SPIN2BQ9BPZ2 258 aa5.34□□□□□ -1.55
ATXN3-219ENST00000553488 C11orf68Q9H3H3 251 aaKnown RBP5.34□□□□□ -1.55
ATXN3-219ENST00000553488 UBQLN2Q9UHD9 624 aa5.34□□□□□ -1.55
ATXN3-219ENST00000553488 HSF4Q9ULV5 492 aa5.34□□□□□ -1.55
ATXN3-219ENST00000553488 S4R3C0 116 aa5.34□□□□□ -1.55
ATXN3-219ENST00000553488 AGRNO00468 2067 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 TRBV6-7A0A0A0MS04 114 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 IRGMA1A4Y4 181 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 HMX3A6NHT5 357 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms