RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 CHST1O43916 411 aa9.02□□□□□ -0.97
TMEM116-218ENST00000552839 RAMP3O60896 148 aa9.02□□□□□ -0.97
TMEM116-218ENST00000552839 PROP1O75360 226 aa9.02□□□□□ -0.97
TMEM116-218ENST00000552839 SNAPC5O75971 98 aa9.02□□□□□ -0.97
TMEM116-218ENST00000552839 CNIH1O95406 144 aa9.02□□□□□ -0.97
TMEM116-218ENST00000552839 PTTG1O95997 202 aa9.02□□□□□ -0.97
TMEM116-218ENST00000552839 SLC6A1P30531 599 aa9.02□□□□□ -0.97
TMEM116-218ENST00000552839 BTCP35070 178 aa9.02□□□□□ -0.97
TMEM116-218ENST00000552839 EIF4EBP1Q13541 118 aaPredicted RBP9.02□□□□□ -0.97
TMEM116-218ENST00000552839 EBI3Q14213 229 aa9.02□□□□□ -0.97
TMEM116-218ENST00000552839 NSUN5P1Q3KNT7 163 aa9.02□□□□□ -0.97
TMEM116-218ENST00000552839 SP6Q3SY56 376 aa9.02□□□□□ -0.97
TMEM116-218ENST00000552839 TMEM128Q5BJH2 165 aa9.02□□□□□ -0.97
TMEM116-218ENST00000552839 NRARPQ7Z6K4 114 aa9.02□□□□□ -0.97
TMEM116-218ENST00000552839 COQ8AQ8NI60 647 aa9.02□□□□□ -0.97
TMEM116-218ENST00000552839 PIFOQ8TCI5 191 aa9.02□□□□□ -0.97
TMEM116-218ENST00000552839 MRGPRFQ96AM1 343 aa9.02□□□□□ -0.97
TMEM116-218ENST00000552839 RTBDNQ9BSG5 229 aaPredicted RBP9.02□□□□□ -0.97
TMEM116-218ENST00000552839 RANBP3Q9H6Z4 567 aaPredicted RBP9.02□□□□□ -0.97
TMEM116-218ENST00000552839 PLEKHA2Q9HB19 425 aa9.02□□□□□ -0.97
TMEM116-218ENST00000552839 GPN1Q9HCN4 374 aaPredicted RBP9.02□□□□□ -0.97
TMEM116-218ENST00000552839 FLVCR2Q9UPI3 526 aa9.02□□□□□ -0.97
TMEM116-218ENST00000552839 DNAH3Q8TD57 4116 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 MARCH11A6NNE9 402 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 DHFRP00374 187 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 KRASP01116 189 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 SAA1P0DJI8 122 aaPredicted RBP9.01□□□□□ -0.97
TMEM116-218ENST00000552839 VSIG10L2P0DP72 767 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 ANXA7P20073 488 aaKnown RBP9.01□□□□□ -0.97
TMEM116-218ENST00000552839 CNTFRP26992 372 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 VDAC2P45880 294 aaPredicted RBP9.01□□□□□ -0.97
TMEM116-218ENST00000552839 UBE2KP61086 200 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 IFITM3Q01628 133 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 PSG5Q15238 335 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 C5orf64Q2M2E5 130 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 TMEM268Q5VZI3 342 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 LIN54Q6MZP7 749 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 CCBE1Q6UXH8 406 aaPredicted RBP9.01□□□□□ -0.97
TMEM116-218ENST00000552839 H2BFWTQ7Z2G1 175 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 SLC35E3Q7Z769 313 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 SLC25A42Q86VD7 318 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 FOXRED2Q8IWF2 684 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 VKORC1L1Q8N0U8 176 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 LGI3Q8N145 548 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 Q8N6K4 173 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 C5orf56Q8N8D9 126 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 RHOVQ96L33 236 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 TP53RKQ96S44 253 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 PHB2Q99623 299 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 PDCD10Q9BUL8 212 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 PARP11Q9NR21 331 aa9.01□□□□□ -0.97
TMEM116-218ENST00000552839 FAM212BQ9NTI7 297 aaPredicted RBP9.01□□□□□ -0.97
TMEM116-218ENST00000552839 SH2D7A6NKC9 451 aaPredicted RBP9□□□□□ -0.97
TMEM116-218ENST00000552839 INMT-MINDY4F8WBC2 141 aa9□□□□□ -0.97
TMEM116-218ENST00000552839 K7EIL1 84 aa9□□□□□ -0.97
TMEM116-218ENST00000552839 OR2A4O95047 310 aa9□□□□□ -0.97
TMEM116-218ENST00000552839 SFT2D2O95562 160 aa9□□□□□ -0.97
TMEM116-218ENST00000552839 CA2P00918 260 aa9□□□□□ -0.97
TMEM116-218ENST00000552839 OR4E1P0C645 316 aa9□□□□□ -0.97
TMEM116-218ENST00000552839 G6PCP35575 357 aa9□□□□□ -0.97
TMEM116-218ENST00000552839 F2RL1P55085 397 aa9□□□□□ -0.97
TMEM116-218ENST00000552839 PPP1R1AQ13522 171 aa9□□□□□ -0.97
TMEM116-218ENST00000552839 TNXAQ16473 311 aa9□□□□□ -0.97
TMEM116-218ENST00000552839 THOC7Q6I9Y2 204 aaKnown RBP9□□□□□ -0.97
TMEM116-218ENST00000552839 MMD2Q8IY49 270 aa9□□□□□ -0.97
TMEM116-218ENST00000552839 NPBQ8NG41 125 aa9□□□□□ -0.97
TMEM116-218ENST00000552839 OR4A16Q8NH70 328 aa9□□□□□ -0.97
TMEM116-218ENST00000552839 RBPMSQ93062 196 aaKnown RBP9□□□□□ -0.97
TMEM116-218ENST00000552839 TMEM230Q96A57 120 aa9□□□□□ -0.97
TMEM116-218ENST00000552839 RBMXL1Q96E39 390 aaKnown RBP9□□□□□ -0.97
TMEM116-218ENST00000552839 OR2A7Q96R45 310 aa9□□□□□ -0.97
TMEM116-218ENST00000552839 TMEM222Q9H0R3 208 aa9□□□□□ -0.97
TMEM116-218ENST00000552839 TMEM140Q9NV12 185 aa9□□□□□ -0.97
TMEM116-218ENST00000552839 ADARB2-AS1A8MUL3 147 aa8.99□□□□□ -0.97
TMEM116-218ENST00000552839 PRAF2O60831 178 aa8.99□□□□□ -0.97
TMEM116-218ENST00000552839 FBXO24O75426 580 aa8.99□□□□□ -0.97
TMEM116-218ENST00000552839 KBTBD11O94819 623 aa8.99□□□□□ -0.97
TMEM116-218ENST00000552839 NDUFA3O95167 84 aa8.99□□□□□ -0.97
TMEM116-218ENST00000552839 IFNA21P01568 189 aa8.99□□□□□ -0.97
TMEM116-218ENST00000552839 HLA-DRB1P01911 266 aa8.99□□□□□ -0.97
TMEM116-218ENST00000552839 CD28P10747 220 aa8.99□□□□□ -0.97
TMEM116-218ENST00000552839 UCP1P25874 307 aa8.99□□□□□ -0.97
TMEM116-218ENST00000552839 OR4A47Q6IF82 309 aa8.99□□□□□ -0.97
TMEM116-218ENST00000552839 LYG2Q86SG7 212 aa8.99□□□□□ -0.97
TMEM116-218ENST00000552839 PPP1R27Q86WC6 154 aa8.99□□□□□ -0.97
TMEM116-218ENST00000552839 Q8N9W7 124 aa8.99□□□□□ -0.97
TMEM116-218ENST00000552839 TEX45Q8NA69 505 aa8.99□□□□□ -0.97
TMEM116-218ENST00000552839 UXS1Q8NBZ7 420 aa8.99□□□□□ -0.97
TMEM116-218ENST00000552839 OR4A5Q8NH83 315 aa8.99□□□□□ -0.97
TMEM116-218ENST00000552839 GRPEL2Q8TAA5 225 aa8.99□□□□□ -0.97
TMEM116-218ENST00000552839 GALNT14Q96FL9 552 aa8.99□□□□□ -0.97
TMEM116-218ENST00000552839 RITA1Q96K30 269 aa8.99□□□□□ -0.97
TMEM116-218ENST00000552839 COMMD5Q9GZQ3 224 aa8.99□□□□□ -0.97
TMEM116-218ENST00000552839 C9orf170A2RU37 121 aa8.98□□□□□ -0.97
TMEM116-218ENST00000552839 IGLL1P15814 213 aa8.98□□□□□ -0.97
TMEM116-218ENST00000552839 VDAC1P21796 283 aa8.98□□□□□ -0.97
TMEM116-218ENST00000552839 MECP2P51608 486 aaKnown RBP8.98□□□□□ -0.97
TMEM116-218ENST00000552839 RPL8P62917 257 aaKnown RBP8.98□□□□□ -0.97
TMEM116-218ENST00000552839 SLC35B1P78383 322 aa8.98□□□□□ -0.97
TMEM116-218ENST00000552839 ECSCRQ19T08 205 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms