RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 FOLR2P14207 255 aa12.12□□□□□ -0.47
CALCOCO1-220ENST00000552282 FGF9P31371 208 aaPredicted RBP12.12□□□□□ -0.47
CALCOCO1-220ENST00000552282 BRWD1-AS2P59051 145 aa12.12□□□□□ -0.47
CALCOCO1-220ENST00000552282 CCDC140Q96MF4 163 aa12.12□□□□□ -0.47
CALCOCO1-220ENST00000552282 FYTTD1Q96QD9 318 aaKnown RBP12.12□□□□□ -0.47
CALCOCO1-220ENST00000552282 OR2A7Q96R45 310 aa12.12□□□□□ -0.47
CALCOCO1-220ENST00000552282 ELF5Q9UKW6 265 aaPredicted RBP12.12□□□□□ -0.47
CALCOCO1-220ENST00000552282 A0A075B6Q4 140 aa12.11□□□□□ -0.47
CALCOCO1-220ENST00000552282 IGKV1D-13A0A0B4J2D9 117 aa12.11□□□□□ -0.47
CALCOCO1-220ENST00000552282 A0A1B0GW64 132 aa12.11□□□□□ -0.47
CALCOCO1-220ENST00000552282 OR2J3O76001 311 aa12.11□□□□□ -0.47
CALCOCO1-220ENST00000552282 IGKV1-13P0DP09 117 aa12.11□□□□□ -0.47
CALCOCO1-220ENST00000552282 CTRB1P17538 263 aa12.11□□□□□ -0.47
CALCOCO1-220ENST00000552282 RPL27AP46776 148 aaKnown RBP12.11□□□□□ -0.47
CALCOCO1-220ENST00000552282 CDNFQ49AH0 187 aa12.11□□□□□ -0.47
CALCOCO1-220ENST00000552282 CTRB2Q6GPI1 263 aa12.11□□□□□ -0.47
CALCOCO1-220ENST00000552282 ZNF66Q6ZN08 573 aa12.11□□□□□ -0.47
CALCOCO1-220ENST00000552282 DYNLRB2Q8TF09 96 aa12.11□□□□□ -0.47
CALCOCO1-220ENST00000552282 RETNQ9HD89 108 aa12.11□□□□□ -0.47
CALCOCO1-220ENST00000552282 TMEM213A2RRL7 107 aa12.1□□□□□ -0.47
CALCOCO1-220ENST00000552282 NOTOA8MTQ0 251 aa12.1□□□□□ -0.47
CALCOCO1-220ENST00000552282 OR11H12B2RN74 326 aa12.1□□□□□ -0.47
CALCOCO1-220ENST00000552282 E7EUB6 86 aa12.1□□□□□ -0.47
CALCOCO1-220ENST00000552282 RBFOX2O43251 390 aaKnown RBP eCLIP12.1□□□□□ -0.47
CALCOCO1-220ENST00000552282 HIST1H1BP16401 226 aaKnown RBP12.1□□□□□ -0.47
CALCOCO1-220ENST00000552282 HSPA13P48723 471 aa12.1□□□□□ -0.47
CALCOCO1-220ENST00000552282 DEFB125Q8N687 156 aa12.1□□□□□ -0.47
CALCOCO1-220ENST00000552282 ATG5Q9H1Y0 275 aa12.1□□□□□ -0.47
CALCOCO1-220ENST00000552282 SRD5A3Q9H8P0 318 aa12.1□□□□□ -0.47
CALCOCO1-220ENST00000552282 BET1LQ9NYM9 111 aa12.1□□□□□ -0.47
CALCOCO1-220ENST00000552282 ANXA10Q9UJ72 324 aa12.1□□□□□ -0.47
CALCOCO1-220ENST00000552282 HMX3A6NHT5 357 aa12.09□□□□□ -0.47
CALCOCO1-220ENST00000552282 PPP5D1E7EU14 171 aa12.09□□□□□ -0.47
CALCOCO1-220ENST00000552282 DHFRP00374 187 aa12.09□□□□□ -0.47
CALCOCO1-220ENST00000552282 CBLN1P23435 193 aa12.09□□□□□ -0.47
CALCOCO1-220ENST00000552282 NFYAP23511 347 aaPredicted RBP12.09□□□□□ -0.47
CALCOCO1-220ENST00000552282 PSMB6P28072 239 aa12.09□□□□□ -0.47
CALCOCO1-220ENST00000552282 SCAND1P57086 179 aa12.09□□□□□ -0.47
CALCOCO1-220ENST00000552282 GABARAPL2P60520 117 aa12.09□□□□□ -0.47
CALCOCO1-220ENST00000552282 POU2AF1Q16633 256 aa12.09□□□□□ -0.47
CALCOCO1-220ENST00000552282 UBE2UQ5VVX9 321 aa12.09□□□□□ -0.47
CALCOCO1-220ENST00000552282 OR4A47Q6IF82 309 aa12.09□□□□□ -0.47
CALCOCO1-220ENST00000552282 SLC16A13Q7RTY0 426 aa12.09□□□□□ -0.47
CALCOCO1-220ENST00000552282 OR4A5Q8NH83 315 aa12.09□□□□□ -0.47
CALCOCO1-220ENST00000552282 SRSF8Q9BRL6 282 aaKnown RBP12.09□□□□□ -0.47
CALCOCO1-220ENST00000552282 WFDC10AQ9H1F0 79 aa12.09□□□□□ -0.47
CALCOCO1-220ENST00000552282 FBXL7Q9UJT9 491 aa12.09□□□□□ -0.47
CALCOCO1-220ENST00000552282 IGLV11-55A0A075B6I3 123 aa12.08□□□□□ -0.48
CALCOCO1-220ENST00000552282 TRAV25A0A0B4J276 109 aa12.08□□□□□ -0.48
CALCOCO1-220ENST00000552282 SSX5O60225 188 aa12.08□□□□□ -0.48
CALCOCO1-220ENST00000552282 HRASP01112 189 aa12.08□□□□□ -0.48
CALCOCO1-220ENST00000552282 C8orf88P0DMB2 117 aa12.08□□□□□ -0.48
CALCOCO1-220ENST00000552282 EDN2P20800 178 aa12.08□□□□□ -0.48
CALCOCO1-220ENST00000552282 C22orf42Q6IC83 251 aa12.08□□□□□ -0.48
CALCOCO1-220ENST00000552282 TPRA1Q86W33 373 aa12.08□□□□□ -0.48
CALCOCO1-220ENST00000552282 TMEM61Q8N0U2 210 aa12.08□□□□□ -0.48
CALCOCO1-220ENST00000552282 VKORC1L1Q8N0U8 176 aa12.08□□□□□ -0.48
CALCOCO1-220ENST00000552282 MFSD4AQ8N468 514 aa12.08□□□□□ -0.48
CALCOCO1-220ENST00000552282 NUDCD2Q8WVJ2 157 aa12.08□□□□□ -0.48
CALCOCO1-220ENST00000552282 MARC2Q969Z3 335 aa12.08□□□□□ -0.48
CALCOCO1-220ENST00000552282 WDR89Q96FK6 387 aaPredicted RBP12.08□□□□□ -0.48
CALCOCO1-220ENST00000552282 FAM110AQ9BQ89 295 aa12.08□□□□□ -0.48
CALCOCO1-220ENST00000552282 AIFM2Q9BRQ8 373 aa12.08□□□□□ -0.48
CALCOCO1-220ENST00000552282 DCUN1D5Q9BTE7 237 aa12.08□□□□□ -0.48
CALCOCO1-220ENST00000552282 VCX3BQ9H321 246 aa12.08□□□□□ -0.48
CALCOCO1-220ENST00000552282 FRAS1Q86XX4 4008 aa12.08□□□□□ -0.48
CALCOCO1-220ENST00000552282 TRBV7-1A0A0A6YYK4 115 aa12.07□□□□□ -0.48
CALCOCO1-220ENST00000552282 TMEM235A6NFC5 223 aa12.07□□□□□ -0.48
CALCOCO1-220ENST00000552282 CGB1A6NKQ9 187 aa12.07□□□□□ -0.48
CALCOCO1-220ENST00000552282 NDUFB8O95169 186 aa12.07□□□□□ -0.48
CALCOCO1-220ENST00000552282 OR2C1O95371 312 aa12.07□□□□□ -0.48
CALCOCO1-220ENST00000552282 AREGP15514 252 aa12.07□□□□□ -0.48
CALCOCO1-220ENST00000552282 ARL3P36405 182 aa12.07□□□□□ -0.48
CALCOCO1-220ENST00000552282 ELLP55199 621 aaPredicted RBP12.07□□□□□ -0.48
CALCOCO1-220ENST00000552282 RPL8P62917 257 aaKnown RBP12.07□□□□□ -0.48
CALCOCO1-220ENST00000552282 KMT2AQ03164 3969 aa12.07□□□□□ -0.48
CALCOCO1-220ENST00000552282 FAM106AQ4KMX7 169 aa12.07□□□□□ -0.48
CALCOCO1-220ENST00000552282 WFDC3Q8IUB2 231 aa12.07□□□□□ -0.48
CALCOCO1-220ENST00000552282 ZBTB34Q8NCN2 500 aa12.07□□□□□ -0.48
CALCOCO1-220ENST00000552282 TCTEX1D2Q8WW35 142 aa12.07□□□□□ -0.48
CALCOCO1-220ENST00000552282 EEF1AKMT3Q96AZ1 226 aa12.07□□□□□ -0.48
CALCOCO1-220ENST00000552282 CXorf58Q96LI9 332 aa12.07□□□□□ -0.48
CALCOCO1-220ENST00000552282 ST6GALNAC5Q9BVH7 336 aa12.07□□□□□ -0.48
CALCOCO1-220ENST00000552282 MLXQ9UH92 298 aa12.07□□□□□ -0.48
CALCOCO1-220ENST00000552282 HLA-AP01891 365 aaKnown RBP12.06□□□□□ -0.48
CALCOCO1-220ENST00000552282 HLA-GP17693 338 aa12.06□□□□□ -0.48
CALCOCO1-220ENST00000552282 ANKRD55Q3KP44 614 aa12.06□□□□□ -0.48
CALCOCO1-220ENST00000552282 TIMM50Q3ZCQ8 353 aa12.06□□□□□ -0.48
CALCOCO1-220ENST00000552282 OR2B11Q5JQS5 317 aa12.06□□□□□ -0.48
CALCOCO1-220ENST00000552282 ZNF57Q68EA5 555 aaPredicted RBP12.06□□□□□ -0.48
CALCOCO1-220ENST00000552282 C19orf35Q6ZS72 473 aa12.06□□□□□ -0.48
CALCOCO1-220ENST00000552282 ATP6V0BQ99437 205 aa12.06□□□□□ -0.48
CALCOCO1-220ENST00000552282 TXNL4BQ9NX01 149 aaKnown RBP12.06□□□□□ -0.48
CALCOCO1-220ENST00000552282 A0A0A6YYH2 397 aa12.05□□□□□ -0.48
CALCOCO1-220ENST00000552282 DPPA5A6NC42 116 aa12.05□□□□□ -0.48
CALCOCO1-220ENST00000552282 A6NJ64 397 aa12.05□□□□□ -0.48
CALCOCO1-220ENST00000552282 ATF4P18848 351 aaPredicted RBP12.05□□□□□ -0.48
CALCOCO1-220ENST00000552282 TAS2R31P59538 309 aa12.05□□□□□ -0.48
CALCOCO1-220ENST00000552282 GNG2P59768 71 aa12.05□□□□□ -0.48
CALCOCO1-220ENST00000552282 GUCA2BQ16661 112 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms