RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 IL15RAQ13261 267 aa8.34□□□□□ -1.07
NEK3-203ENST00000551355 PSG5Q15238 335 aa8.34□□□□□ -1.07
NEK3-203ENST00000551355 MMDQ15546 238 aa8.34□□□□□ -1.07
NEK3-203ENST00000551355 PDLIM3Q53GG5 364 aaPredicted RBP8.34□□□□□ -1.07
NEK3-203ENST00000551355 SSX9Q7RTT3 188 aa8.34□□□□□ -1.07
NEK3-203ENST00000551355 C16orf82Q7Z2V1 217 aa8.34□□□□□ -1.07
NEK3-203ENST00000551355 MMD2Q8IY49 270 aa8.34□□□□□ -1.07
NEK3-203ENST00000551355 Q8N6K4 173 aa8.34□□□□□ -1.07
NEK3-203ENST00000551355 OR4D5Q8NGN0 318 aa8.34□□□□□ -1.07
NEK3-203ENST00000551355 OR5B3Q8NH48 314 aa8.34□□□□□ -1.07
NEK3-203ENST00000551355 PPP1R1CQ8WVI7 109 aa8.34□□□□□ -1.07
NEK3-203ENST00000551355 SSX3Q99909 188 aa8.34□□□□□ -1.07
NEK3-203ENST00000551355 CDC42EP3Q9UKI2 254 aa8.34□□□□□ -1.07
NEK3-203ENST00000551355 FOXA2Q9Y261 457 aaPredicted RBP8.34□□□□□ -1.07
NEK3-203ENST00000551355 ZNF257Q9Y2Q1 563 aa8.34□□□□□ -1.07
NEK3-203ENST00000551355 ARHGAP32A7KAX9 2087 aa8.33□□□□□ -1.08
NEK3-203ENST00000551355 MED13LQ71F56 2210 aa8.33□□□□□ -1.08
NEK3-203ENST00000551355 A0A0G2JRQ6 117 aa8.33□□□□□ -1.08
NEK3-203ENST00000551355 C15orf61A6NNL5 157 aa8.33□□□□□ -1.08
NEK3-203ENST00000551355 WRBO00258 174 aa8.33□□□□□ -1.08
NEK3-203ENST00000551355 SLC25A17O43808 307 aa8.33□□□□□ -1.08
NEK3-203ENST00000551355 ACTL6BO94805 426 aa8.33□□□□□ -1.08
NEK3-203ENST00000551355 CRYGBP07316 175 aa8.33□□□□□ -1.08
NEK3-203ENST00000551355 PVALBP20472 110 aaPredicted RBP8.33□□□□□ -1.08
NEK3-203ENST00000551355 SPCS3P61009 180 aa8.33□□□□□ -1.08
NEK3-203ENST00000551355 RPL8P62917 257 aaKnown RBP8.33□□□□□ -1.08
NEK3-203ENST00000551355 RELBQ01201 579 aa8.33□□□□□ -1.08
NEK3-203ENST00000551355 PLGLAQ15195 96 aa8.33□□□□□ -1.08
NEK3-203ENST00000551355 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.33□□□□□ -1.085e-7■■■■□ 23.5
NEK3-203ENST00000551355 Q6ZRM9 215 aa8.33□□□□□ -1.08
NEK3-203ENST00000551355 PPP1R27Q86WC6 154 aa8.33□□□□□ -1.08
NEK3-203ENST00000551355 MRPL41Q8IXM3 137 aaKnown RBP8.33□□□□□ -1.08
NEK3-203ENST00000551355 VKORC1L1Q8N0U8 176 aa8.33□□□□□ -1.08
NEK3-203ENST00000551355 THAP6Q8TBB0 222 aa8.33□□□□□ -1.08
NEK3-203ENST00000551355 SSMEM1Q8WWF3 244 aa8.33□□□□□ -1.08
NEK3-203ENST00000551355 CIB3Q96Q77 187 aaPredicted RBP8.33□□□□□ -1.08
NEK3-203ENST00000551355 CLCC1Q96S66 551 aa8.33□□□□□ -1.08
NEK3-203ENST00000551355 COMMD5Q9GZQ3 224 aa8.33□□□□□ -1.08
NEK3-203ENST00000551355 TMEM14BQ9NUH8 114 aa8.33□□□□□ -1.08
NEK3-203ENST00000551355 METTL1Q9UBP6 276 aaKnown RBP8.33□□□□□ -1.08
NEK3-203ENST00000551355 HSPB7Q9UBY9 170 aa8.33□□□□□ -1.08
NEK3-203ENST00000551355 SIGLEC9Q9Y336 463 aa8.33□□□□□ -1.08
NEK3-203ENST00000551355 POMT1Q9Y6A1 747 aa8.33□□□□□ -1.08
NEK3-203ENST00000551355 NOTCH2Q04721 2471 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 CR1P17927 2039 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 ABCA2Q9BZC7 2435 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 NCBP2LA6PVI3 153 aaKnown RBP8.32□□□□□ -1.08
NEK3-203ENST00000551355 FGF16O43320 207 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 OR2F2O95006 317 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 MPC2O95563 127 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 IFNA17P01571 189 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 C1QBP02746 253 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 OR9G9P0C7N8 305 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 SLC25A4P12235 298 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 TAS2R30P59541 319 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 HSPE1P61604 102 aaKnown RBP8.32□□□□□ -1.08
NEK3-203ENST00000551355 TNFRSF9Q07011 255 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 HNF4GQ14541 408 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 PRSS8Q16651 343 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 C5orf64Q2M2E5 130 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 DEFB112Q30KQ8 113 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 ZFP69Q49AA0 526 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 CLEC9AQ6UXN8 241 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 RBMS3Q6XE24 437 aaKnown RBP8.32□□□□□ -1.08
NEK3-203ENST00000551355 Q6YL49 198 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 TMEM86BQ8N661 226 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 RITA1Q96K30 269 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 HYLS1Q96M11 299 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 RBM14Q96PK6 669 aaKnown RBP8.32□□□□□ -1.08
NEK3-203ENST00000551355 RAB40CQ96S21 281 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 TCF19Q9Y242 345 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 MOB4Q9Y3A3 225 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 OR51B2Q9Y5P1 312 aa8.32□□□□□ -1.08
NEK3-203ENST00000551355 A6NDX4 124 aa8.31□□□□□ -1.08
NEK3-203ENST00000551355 E5RGE8 158 aa8.31□□□□□ -1.08
NEK3-203ENST00000551355 H3BUX3 64 aa8.31□□□□□ -1.08
NEK3-203ENST00000551355 SYNGR2O43760 224 aa8.31□□□□□ -1.08
NEK3-203ENST00000551355 GPR137BO60478 399 aa8.31□□□□□ -1.08
NEK3-203ENST00000551355 DEDDO75618 318 aa8.31□□□□□ -1.08
NEK3-203ENST00000551355 SCAF4O95104 1147 aaKnown RBP8.31□□□□□ -1.08
NEK3-203ENST00000551355 LY6G6DO95868 133 aa8.31□□□□□ -1.08
NEK3-203ENST00000551355 SCGB1D2O95969 90 aa8.31□□□□□ -1.08
NEK3-203ENST00000551355 MBPP02686 304 aaPredicted RBP8.31□□□□□ -1.08
NEK3-203ENST00000551355 IER3P46695 156 aa8.31□□□□□ -1.08
NEK3-203ENST00000551355 F2RL1P55085 397 aa8.31□□□□□ -1.08
NEK3-203ENST00000551355 ATP5IP56385 69 aaPredicted RBP8.31□□□□□ -1.08
NEK3-203ENST00000551355 S100A10P60903 97 aa8.31□□□□□ -1.08
NEK3-203ENST00000551355 RPP30P78346 268 aaKnown RBP8.31□□□□□ -1.08
NEK3-203ENST00000551355 RAB32Q13637 225 aa8.31□□□□□ -1.08
NEK3-203ENST00000551355 CXorf66Q5JRM2 361 aaPredicted RBP8.31□□□□□ -1.08
NEK3-203ENST00000551355 C11orf87Q6NUJ2 197 aa8.31□□□□□ -1.08
NEK3-203ENST00000551355 PRSS54Q6PEW0 395 aa8.31□□□□□ -1.08
NEK3-203ENST00000551355 TMEM65Q6PI78 240 aa8.31□□□□□ -1.08
NEK3-203ENST00000551355 HSD17B13Q7Z5P4 300 aaPredicted RBP8.31□□□□□ -1.08
NEK3-203ENST00000551355 OR1L8Q8NGR8 309 aa8.31□□□□□ -1.08
NEK3-203ENST00000551355 PIFOQ8TCI5 191 aa8.31□□□□□ -1.08
NEK3-203ENST00000551355 RASL11BQ9BPW5 248 aa8.31□□□□□ -1.08
NEK3-203ENST00000551355 SRSF8Q9BRL6 282 aaKnown RBP8.31□□□□□ -1.08
NEK3-203ENST00000551355 ZNF430Q9H8G1 570 aaPredicted RBP8.31□□□□□ -1.08
NEK3-203ENST00000551355 ENY2Q9NPA8 101 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms