RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 MS4A6AQ9H2W1 248 aa0.67□□□□□ -2.3
GPN3-209ENST00000551079 EURLQ9NYK6 297 aa0.67□□□□□ -2.3
GPN3-209ENST00000551079 FLT4P35916 1363 aa0.67□□□□□ -2.3
GPN3-209ENST00000551079 ARFGEF3Q5TH69 2177 aa0.66□□□□□ -2.3
GPN3-209ENST00000551079 MEIS3P1A6NDR6 274 aa0.66□□□□□ -2.3
GPN3-209ENST00000551079 COX7A2LO14548 114 aa0.66□□□□□ -2.3
GPN3-209ENST00000551079 ATP8B1O43520 1251 aa0.66□□□□□ -2.3
GPN3-209ENST00000551079 CCL5P13501 91 aa0.66□□□□□ -2.3
GPN3-209ENST00000551079 CD40LGP29965 261 aa0.66□□□□□ -2.3
GPN3-209ENST00000551079 EMX1Q04741 257 aaPredicted RBP0.66□□□□□ -2.3
GPN3-209ENST00000551079 JOSD1Q15040 202 aaPredicted RBP0.66□□□□□ -2.3
GPN3-209ENST00000551079 SURF2Q15527 256 aaPredicted RBP0.66□□□□□ -2.3
GPN3-209ENST00000551079 C9orf64Q5T6V5 341 aa0.66□□□□□ -2.3
GPN3-209ENST00000551079 GNPNAT1Q96EK6 184 aaPredicted RBP0.66□□□□□ -2.3
GPN3-209ENST00000551079 ODF3Q96PU9 254 aa0.66□□□□□ -2.3
GPN3-209ENST00000551079 XAGE1AQ9HD64 81 aa0.66□□□□□ -2.3
GPN3-209ENST00000551079 POLEQ07864 2286 aa0.66□□□□□ -2.3
GPN3-209ENST00000551079 TRPC5OSA6NMA1 111 aa0.65□□□□□ -2.31
GPN3-209ENST00000551079 HSBP1L1C9JCN9 74 aa0.65□□□□□ -2.31
GPN3-209ENST00000551079 PPBPP02775 128 aa0.65□□□□□ -2.31
GPN3-209ENST00000551079 PET100P0DJ07 73 aa0.65□□□□□ -2.31
GPN3-209ENST00000551079 HIST1H1CP16403 213 aaKnown RBP0.65□□□□□ -2.31
GPN3-209ENST00000551079 DDTP30046 118 aa0.65□□□□□ -2.31
GPN3-209ENST00000551079 CXCR4P61073 352 aa0.65□□□□□ -2.31
GPN3-209ENST00000551079 DEFB115Q30KQ5 88 aa0.65□□□□□ -2.31
GPN3-209ENST00000551079 SDHAF4Q5VUM1 108 aa0.65□□□□□ -2.31
GPN3-209ENST00000551079 CD302Q8IX05 232 aa0.65□□□□□ -2.31
GPN3-209ENST00000551079 C9orf163Q8N9P6 203 aa0.65□□□□□ -2.31
GPN3-209ENST00000551079 UPF3BQ9BZI7 483 aaKnown RBP0.65□□□□□ -2.31
GPN3-209ENST00000551079 SPANXB1Q9NS25 103 aaPredicted RBP0.65□□□□□ -2.31
GPN3-209ENST00000551079 CFAP45Q9UL16 551 aa0.65□□□□□ -2.31
GPN3-209ENST00000551079 CACNA1BQ00975 2339 aa0.64□□□□□ -2.31
GPN3-209ENST00000551079 TINCRA0A1B0GVN0 87 aa0.64□□□□□ -2.31
GPN3-209ENST00000551079 TMEM269A0A1B0GVZ9 245 aa0.64□□□□□ -2.31
GPN3-209ENST00000551079 ERICH2A1L162 156 aa0.64□□□□□ -2.31
GPN3-209ENST00000551079 IBA57-AS1B1ANH7 110 aa0.64□□□□□ -2.31
GPN3-209ENST00000551079 HCRTO43612 131 aa0.64□□□□□ -2.31
GPN3-209ENST00000551079 KRT75O95678 551 aa0.64□□□□□ -2.31
GPN3-209ENST00000551079 TFPTP0C1Z6 253 aa0.64□□□□□ -2.31
GPN3-209ENST00000551079 TRGC1P0CF51 173 aa0.64□□□□□ -2.31
GPN3-209ENST00000551079 SBSNQ6UWP8 590 aa0.64□□□□□ -2.31
GPN3-209ENST00000551079 HAVCR2Q8TDQ0 301 aa0.64□□□□□ -2.31
GPN3-209ENST00000551079 ZNF514Q96K75 400 aaPredicted RBP0.64□□□□□ -2.31
GPN3-209ENST00000551079 DHRS9Q9BPW9 319 aa0.64□□□□□ -2.31
GPN3-209ENST00000551079 DERL2Q9GZP9 239 aa0.64□□□□□ -2.31
GPN3-209ENST00000551079 WDR54Q9H977 334 aa0.64□□□□□ -2.31
GPN3-209ENST00000551079 HRASLSQ9HDD0 168 aa0.64□□□□□ -2.31
GPN3-209ENST00000551079 CD300AQ9UGN4 299 aa0.64□□□□□ -2.31
GPN3-209ENST00000551079 NAT8Q9UHE5 227 aa0.64□□□□□ -2.31
GPN3-209ENST00000551079 PRELID1Q9Y255 219 aa0.64□□□□□ -2.31
GPN3-209ENST00000551079 NCOA6Q14686 2063 aaPredicted RBP0.64□□□□□ -2.31
GPN3-209ENST00000551079 MAST2Q6P0Q8 1798 aa0.63□□□□□ -2.31
GPN3-209ENST00000551079 GOLGA6L10A6NI86 522 aa0.63□□□□□ -2.31
GPN3-209ENST00000551079 HPGDSO60760 199 aa0.63□□□□□ -2.31
GPN3-209ENST00000551079 MSMBP08118 114 aa0.63□□□□□ -2.31
GPN3-209ENST00000551079 MSNP26038 577 aaKnown RBP0.63□□□□□ -2.31
GPN3-209ENST00000551079 RPL30P62888 115 aaKnown RBP0.63□□□□□ -2.31
GPN3-209ENST00000551079 MGAT3Q09327 533 aa0.63□□□□□ -2.31
GPN3-209ENST00000551079 FAM27BQ5VT28 67 aa0.63□□□□□ -2.31
GPN3-209ENST00000551079 CLEC6AQ6EIG7 209 aa0.63□□□□□ -2.31
GPN3-209ENST00000551079 UMODL1-AS1Q8N2C9 162 aa0.63□□□□□ -2.31
GPN3-209ENST00000551079 UBL4BQ8N7F7 174 aa0.63□□□□□ -2.31
GPN3-209ENST00000551079 JOSD2Q8TAC2 188 aa0.63□□□□□ -2.31
GPN3-209ENST00000551079 ACOT12Q8WYK0 555 aa0.63□□□□□ -2.31
GPN3-209ENST00000551079 TESCQ96BS2 214 aa0.63□□□□□ -2.31
GPN3-209ENST00000551079 CHMP4BQ9H444 224 aaKnown RBP0.63□□□□□ -2.31
GPN3-209ENST00000551079 C22orf24Q9Y442 160 aa0.63□□□□□ -2.31
GPN3-209ENST00000551079 RAD50Q92878 1312 aa0.63□□□□□ -2.31
GPN3-209ENST00000551079 SYNRGQ9UMZ2 1314 aa0.63□□□□□ -2.31
GPN3-209ENST00000551079 TRAPPC2LH3BP13 241 aa0.62□□□□□ -2.31
GPN3-209ENST00000551079 COCHO43405 550 aa0.62□□□□□ -2.31
GPN3-209ENST00000551079 NSA2O95478 260 aaKnown RBP0.62□□□□□ -2.31
GPN3-209ENST00000551079 NPPAP01160 153 aa0.62□□□□□ -2.31
GPN3-209ENST00000551079 FUNDC1Q8IVP5 155 aa0.62□□□□□ -2.31
GPN3-209ENST00000551079 OR8B3Q8NGG8 313 aa0.62□□□□□ -2.31
GPN3-209ENST00000551079 OR2T27Q8NH04 317 aa0.62□□□□□ -2.31
GPN3-209ENST00000551079 SGMS2Q8NHU3 365 aa0.62□□□□□ -2.31
GPN3-209ENST00000551079 EEF1AKMT1Q8WVE0 214 aa0.62□□□□□ -2.31
GPN3-209ENST00000551079 SMIM19Q96E16 107 aa0.62□□□□□ -2.31
GPN3-209ENST00000551079 SPACA1Q9HBV2 294 aa0.62□□□□□ -2.31
GPN3-209ENST00000551079 GPR84Q9NQS5 396 aa0.62□□□□□ -2.31
GPN3-209ENST00000551079 GMEB1Q9Y692 573 aa0.62□□□□□ -2.31
GPN3-209ENST00000551079 LHFPL6Q9Y693 200 aa0.62□□□□□ -2.31
GPN3-209ENST00000551079 RALGAPA2Q2PPJ7 1873 aa0.62□□□□□ -2.31
GPN3-209ENST00000551079 GLI3P10071 1580 aa0.62□□□□□ -2.31
GPN3-209ENST00000551079 TONSLQ96HA7 1378 aa0.61□□□□□ -2.31
GPN3-209ENST00000551079 LINC00854A0A1B0GVQ3 168 aa0.61□□□□□ -2.31
GPN3-209ENST00000551079 BIRC5O15392 142 aa0.61□□□□□ -2.31
GPN3-209ENST00000551079 HAAOP46952 286 aa0.61□□□□□ -2.31
GPN3-209ENST00000551079 REG1BP48304 166 aa0.61□□□□□ -2.31
GPN3-209ENST00000551079 C10orf55Q5SWW7 151 aa0.61□□□□□ -2.31
GPN3-209ENST00000551079 C5orf46Q6UWT4 87 aa0.61□□□□□ -2.31
GPN3-209ENST00000551079 SSX8Q7RTT4 187 aa0.61□□□□□ -2.31
GPN3-209ENST00000551079 DHFR2Q86XF0 187 aa0.61□□□□□ -2.31
GPN3-209ENST00000551079 OR7G1Q8NGA0 311 aa0.61□□□□□ -2.31
GPN3-209ENST00000551079 DCUN1D5Q9BTE7 237 aa0.61□□□□□ -2.31
GPN3-209ENST00000551079 REG4Q9BYZ8 158 aa0.61□□□□□ -2.31
GPN3-209ENST00000551079 NDEL1Q9GZM8 345 aa0.61□□□□□ -2.31
GPN3-209ENST00000551079 COQ4Q9Y3A0 265 aa0.61□□□□□ -2.31
GPN3-209ENST00000551079 TIMM22Q9Y584 194 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms