RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 SLC2A9Q9NRM0 540 aa9.66□□□□□ -0.86
PTCH1-221ENST00000550914 FBXL7Q9UJT9 491 aa9.66□□□□□ -0.86
PTCH1-221ENST00000550914 RBMX2Q9Y388 322 aaKnown RBP9.66□□□□□ -0.86
PTCH1-221ENST00000550914 DPPA5A6NC42 116 aa9.65□□□□□ -0.86
PTCH1-221ENST00000550914 OR2C1O95371 312 aa9.65□□□□□ -0.86
PTCH1-221ENST00000550914 IGLV2-14P01704 120 aa9.65□□□□□ -0.86
PTCH1-221ENST00000550914 CRYGCP07315 174 aa9.65□□□□□ -0.86
PTCH1-221ENST00000550914 IL6RP08887 468 aaPredicted RBP9.65□□□□□ -0.86
PTCH1-221ENST00000550914 ZNF735P0CB33 412 aa9.65□□□□□ -0.86
PTCH1-221ENST00000550914 HIST1H1BP16401 226 aaKnown RBP9.65□□□□□ -0.86
PTCH1-221ENST00000550914 RAB3BP20337 219 aa9.65□□□□□ -0.86
PTCH1-221ENST00000550914 ARL3P36405 182 aa9.65□□□□□ -0.86
PTCH1-221ENST00000550914 RPL27AP46776 148 aaKnown RBP9.65□□□□□ -0.86
PTCH1-221ENST00000550914 AQP4P55087 323 aa9.65□□□□□ -0.86
PTCH1-221ENST00000550914 ANKRD55Q3KP44 614 aa9.65□□□□□ -0.86
PTCH1-221ENST00000550914 CDNFQ49AH0 187 aa9.65□□□□□ -0.86
PTCH1-221ENST00000550914 HACD4Q5VWC8 232 aa9.65□□□□□ -0.86
PTCH1-221ENST00000550914 ZNF57Q68EA5 555 aaPredicted RBP9.65□□□□□ -0.86
PTCH1-221ENST00000550914 OR4A47Q6IF82 309 aa9.65□□□□□ -0.86
PTCH1-221ENST00000550914 ZNF367Q7RTV3 350 aa9.65□□□□□ -0.86
PTCH1-221ENST00000550914 WDR89Q96FK6 387 aaPredicted RBP9.65□□□□□ -0.86
PTCH1-221ENST00000550914 FANCD2OSQ96PS1 177 aa9.65□□□□□ -0.86
PTCH1-221ENST00000550914 FYTTD1Q96QD9 318 aaKnown RBP9.65□□□□□ -0.86
PTCH1-221ENST00000550914 NDUFB11Q9NX14 153 aa9.65□□□□□ -0.86
PTCH1-221ENST00000550914 TRDV1A0A1B0GX56 115 aa9.64□□□□□ -0.87
PTCH1-221ENST00000550914 TMEM213A2RRL7 107 aa9.64□□□□□ -0.87
PTCH1-221ENST00000550914 HMX3A6NHT5 357 aa9.64□□□□□ -0.87
PTCH1-221ENST00000550914 SCGNO76038 276 aa9.64□□□□□ -0.87
PTCH1-221ENST00000550914 HLA-AP01891 365 aaKnown RBP9.64□□□□□ -0.87
PTCH1-221ENST00000550914 RPL30P62888 115 aaKnown RBP9.64□□□□□ -0.87
PTCH1-221ENST00000550914 EIF4EBP1Q13541 118 aaPredicted RBP9.64□□□□□ -0.87
PTCH1-221ENST00000550914 CNIH2Q6PI25 160 aa9.64□□□□□ -0.87
PTCH1-221ENST00000550914 TMEM61Q8N0U2 210 aa9.64□□□□□ -0.87
PTCH1-221ENST00000550914 VKORC1L1Q8N0U8 176 aa9.64□□□□□ -0.87
PTCH1-221ENST00000550914 MARC2Q969Z3 335 aa9.64□□□□□ -0.87
PTCH1-221ENST00000550914 EEF1AKMT3Q96AZ1 226 aa9.64□□□□□ -0.87
PTCH1-221ENST00000550914 CCDC140Q96MF4 163 aa9.64□□□□□ -0.87
PTCH1-221ENST00000550914 AIFM2Q9BRQ8 373 aa9.64□□□□□ -0.87
PTCH1-221ENST00000550914 ST6GALNAC5Q9BVH7 336 aa9.64□□□□□ -0.87
PTCH1-221ENST00000550914 GGTLC1Q9BX51 225 aa9.64□□□□□ -0.87
PTCH1-221ENST00000550914 ATG5Q9H1Y0 275 aa9.64□□□□□ -0.87
PTCH1-221ENST00000550914 TRBV7-1A0A0A6YYK4 115 aa9.63□□□□□ -0.87
PTCH1-221ENST00000550914 TRAV25A0A0B4J276 109 aa9.63□□□□□ -0.87
PTCH1-221ENST00000550914 NDUFB8O95169 186 aa9.63□□□□□ -0.87
PTCH1-221ENST00000550914 HRASP01112 189 aa9.63□□□□□ -0.87
PTCH1-221ENST00000550914 CTRB1P17538 263 aa9.63□□□□□ -0.87
PTCH1-221ENST00000550914 EDN2P20800 178 aa9.63□□□□□ -0.87
PTCH1-221ENST00000550914 NFYAP23511 347 aaPredicted RBP9.63□□□□□ -0.87
PTCH1-221ENST00000550914 PSMB6P28072 239 aa9.63□□□□□ -0.87
PTCH1-221ENST00000550914 MSMO1Q15800 293 aa9.63□□□□□ -0.87
PTCH1-221ENST00000550914 OR2B11Q5JQS5 317 aa9.63□□□□□ -0.87
PTCH1-221ENST00000550914 CTRB2Q6GPI1 263 aa9.63□□□□□ -0.87
PTCH1-221ENST00000550914 CLEC19AQ6UXS0 136 aa9.63□□□□□ -0.87
PTCH1-221ENST00000550914 ZNF66Q6ZN08 573 aa9.63□□□□□ -0.87
PTCH1-221ENST00000550914 OR52B4Q8NGK2 314 aa9.63□□□□□ -0.87
PTCH1-221ENST00000550914 TCTEX1D2Q8WW35 142 aa9.63□□□□□ -0.87
PTCH1-221ENST00000550914 CXorf58Q96LI9 332 aa9.63□□□□□ -0.87
PTCH1-221ENST00000550914 ELF5Q9UKW6 265 aaPredicted RBP9.63□□□□□ -0.87
PTCH1-221ENST00000550914 FRAS1Q86XX4 4008 aa9.63□□□□□ -0.87
PTCH1-221ENST00000550914 LOC102724200A0A096LPH7 203 aaPredicted RBP9.62□□□□□ -0.87
PTCH1-221ENST00000550914 IGKV1D-13A0A0B4J2D9 117 aa9.62□□□□□ -0.87
PTCH1-221ENST00000550914 A0A1B0GW64 132 aa9.62□□□□□ -0.87
PTCH1-221ENST00000550914 E7EUB6 86 aa9.62□□□□□ -0.87
PTCH1-221ENST00000550914 J3QRK9 145 aa9.62□□□□□ -0.87
PTCH1-221ENST00000550914 IGKV1-13P0DP09 117 aa9.62□□□□□ -0.87
PTCH1-221ENST00000550914 AREGP15514 252 aa9.62□□□□□ -0.87
PTCH1-221ENST00000550914 BRWD1-AS2P59051 145 aa9.62□□□□□ -0.87
PTCH1-221ENST00000550914 RPL8P62917 257 aaKnown RBP9.62□□□□□ -0.87
PTCH1-221ENST00000550914 NR2C2APQ86WQ0 139 aa9.62□□□□□ -0.87
PTCH1-221ENST00000550914 MFSD4AQ8N468 514 aa9.62□□□□□ -0.87
PTCH1-221ENST00000550914 UXS1Q8NBZ7 420 aa9.62□□□□□ -0.87
PTCH1-221ENST00000550914 OR4A5Q8NH83 315 aa9.62□□□□□ -0.87
PTCH1-221ENST00000550914 CACNG8Q8WXS5 425 aa9.62□□□□□ -0.87
PTCH1-221ENST00000550914 LINC00476Q8WZB0 136 aa9.62□□□□□ -0.87
PTCH1-221ENST00000550914 OVOL2Q9BRP0 275 aa9.62□□□□□ -0.87
PTCH1-221ENST00000550914 MLXQ9UH92 298 aa9.62□□□□□ -0.87
PTCH1-221ENST00000550914 ANXA10Q9UJ72 324 aa9.62□□□□□ -0.87
PTCH1-221ENST00000550914 BLOC1S6Q9UL45 172 aa9.62□□□□□ -0.87
PTCH1-221ENST00000550914 IGLV11-55A0A075B6I3 123 aa9.61□□□□□ -0.87
PTCH1-221ENST00000550914 ZNF320A2RRD8 509 aa9.61□□□□□ -0.87
PTCH1-221ENST00000550914 RBFOX2O43251 390 aaKnown RBP eCLIP9.61□□□□□ -0.87
PTCH1-221ENST00000550914 FGF2P09038 288 aa9.61□□□□□ -0.87
PTCH1-221ENST00000550914 C8orf88P0DMB2 117 aa9.61□□□□□ -0.87
PTCH1-221ENST00000550914 DEFA4P12838 97 aa9.61□□□□□ -0.87
PTCH1-221ENST00000550914 HLA-GP17693 338 aa9.61□□□□□ -0.87
PTCH1-221ENST00000550914 ELLP55199 621 aaPredicted RBP9.61□□□□□ -0.87
PTCH1-221ENST00000550914 C19orf35Q6ZS72 473 aa9.61□□□□□ -0.87
PTCH1-221ENST00000550914 WFDC3Q8IUB2 231 aa9.61□□□□□ -0.87
PTCH1-221ENST00000550914 NRG4Q8WWG1 115 aa9.61□□□□□ -0.87
PTCH1-221ENST00000550914 BET1LQ9NYM9 111 aa9.61□□□□□ -0.87
PTCH1-221ENST00000550914 SPATA2Q9UM82 520 aa9.61□□□□□ -0.87
PTCH1-221ENST00000550914 TP53TG1Q9Y2A0 90 aa9.61□□□□□ -0.87
PTCH1-221ENST00000550914 KMT2AQ03164 3969 aa9.61□□□□□ -0.87
PTCH1-221ENST00000550914 TMEM235A6NFC5 223 aa9.6□□□□□ -0.87
PTCH1-221ENST00000550914 NOTOA8MTQ0 251 aa9.6□□□□□ -0.87
PTCH1-221ENST00000550914 IGHV3-23P01764 117 aa9.6□□□□□ -0.87
PTCH1-221ENST00000550914 CLEC3BP05452 202 aa9.6□□□□□ -0.87
PTCH1-221ENST00000550914 FGF9P31371 208 aaPredicted RBP9.6□□□□□ -0.87
PTCH1-221ENST00000550914 GNG2P59768 71 aa9.6□□□□□ -0.87
PTCH1-221ENST00000550914 C22orf42Q6IC83 251 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms