RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 CD300LFQ8TDQ1 290 aa13.33□□□□□ -0.28
CHMP1A-208ENST00000550102 TINAGL1Q9GZM7 467 aaPredicted RBP13.33□□□□□ -0.28
CHMP1A-208ENST00000550102 CCDC59Q9P031 241 aaKnown RBP13.33□□□□□ -0.28
CHMP1A-208ENST00000550102 IGHV4OR15-8A0A075B7B6 117 aa13.32□□□□□ -0.28
CHMP1A-208ENST00000550102 A0A087WW49 117 aa13.32□□□□□ -0.28
CHMP1A-208ENST00000550102 RGS5O15539 181 aa13.32□□□□□ -0.28
CHMP1A-208ENST00000550102 TPPPO94811 219 aa13.32□□□□□ -0.28
CHMP1A-208ENST00000550102 RLN1P04808 185 aa13.32□□□□□ -0.28
CHMP1A-208ENST00000550102 GNRHRP30968 328 aa13.32□□□□□ -0.28
CHMP1A-208ENST00000550102 MAS1LP35410 378 aa13.32□□□□□ -0.28
CHMP1A-208ENST00000550102 RPL5P46777 297 aaKnown RBP13.32□□□□□ -0.28
CHMP1A-208ENST00000550102 TSPAN5P62079 268 aa13.32□□□□□ -0.28
CHMP1A-208ENST00000550102 RNASE12Q5GAN4 147 aaKnown RBP13.32□□□□□ -0.28
CHMP1A-208ENST00000550102 SSX9Q7RTT3 188 aa13.32□□□□□ -0.28
CHMP1A-208ENST00000550102 CMTM1Q8IZ96 169 aa13.32□□□□□ -0.28
CHMP1A-208ENST00000550102 ADAD2Q8NCV1 583 aaKnown RBP13.32□□□□□ -0.28
CHMP1A-208ENST00000550102 C15orf40Q8WUR7 153 aa13.32□□□□□ -0.28
CHMP1A-208ENST00000550102 COMMD9Q9P000 198 aa13.32□□□□□ -0.28
CHMP1A-208ENST00000550102 HSPB1P04792 205 aaKnown RBP13.31□□□□□ -0.28
CHMP1A-208ENST00000550102 RPL27AP46776 148 aaKnown RBP13.31□□□□□ -0.28
CHMP1A-208ENST00000550102 SLURP1P55000 103 aa13.31□□□□□ -0.28
CHMP1A-208ENST00000550102 TAS2R31P59538 309 aa13.31□□□□□ -0.28
CHMP1A-208ENST00000550102 DGCR2P98153 550 aa13.31□□□□□ -0.28
CHMP1A-208ENST00000550102 LAX1Q8IWV1 398 aa13.31□□□□□ -0.28
CHMP1A-208ENST00000550102 OR4A5Q8NH83 315 aa13.31□□□□□ -0.28
CHMP1A-208ENST00000550102 BET1LQ9NYM9 111 aa13.31□□□□□ -0.28
CHMP1A-208ENST00000550102 GPR31O00270 319 aa13.3□□□□□ -0.28
CHMP1A-208ENST00000550102 OVOL1O14753 267 aa13.3□□□□□ -0.28
CHMP1A-208ENST00000550102 HPRT1P00492 218 aa13.3□□□□□ -0.28
CHMP1A-208ENST00000550102 NQO2P16083 231 aa13.3□□□□□ -0.28
CHMP1A-208ENST00000550102 S100GP29377 79 aa13.3□□□□□ -0.28
CHMP1A-208ENST00000550102 RPL8P62917 257 aaKnown RBP13.3□□□□□ -0.28
CHMP1A-208ENST00000550102 POU2AF1Q16633 256 aa13.3□□□□□ -0.28
CHMP1A-208ENST00000550102 VAX1Q5SQQ9 334 aa13.3□□□□□ -0.28
CHMP1A-208ENST00000550102 OR4A47Q6IF82 309 aa13.3□□□□□ -0.28
CHMP1A-208ENST00000550102 SLC25A42Q86VD7 318 aa13.3□□□□□ -0.28
CHMP1A-208ENST00000550102 DYNC2LI1Q8TCX1 351 aa13.3□□□□□ -0.28
CHMP1A-208ENST00000550102 DCUN1D4Q92564 292 aa13.3□□□□□ -0.28
CHMP1A-208ENST00000550102 MIXL1Q9H2W2 232 aa13.3□□□□□ -0.28
CHMP1A-208ENST00000550102 PLEKHA2Q9HB19 425 aa13.3□□□□□ -0.28
CHMP1A-208ENST00000550102 HRASLSQ9HDD0 168 aa13.3□□□□□ -0.28
CHMP1A-208ENST00000550102 WI2-2373I1.2A0A1W2PRP0 233 aa13.29□□□□□ -0.28
CHMP1A-208ENST00000550102 FAM223BA6NKX1 122 aa13.29□□□□□ -0.28
CHMP1A-208ENST00000550102 K7EIL1 84 aa13.29□□□□□ -0.28
CHMP1A-208ENST00000550102 PGLYRP1O75594 196 aaPredicted RBP13.29□□□□□ -0.28
CHMP1A-208ENST00000550102 S1PR2O95136 353 aa13.29□□□□□ -0.28
CHMP1A-208ENST00000550102 HLA-GP17693 338 aa13.29□□□□□ -0.28
CHMP1A-208ENST00000550102 TBPP20226 339 aa13.29□□□□□ -0.28
CHMP1A-208ENST00000550102 INSL3P51460 131 aa13.29□□□□□ -0.28
CHMP1A-208ENST00000550102 ERVK-16P61578 105 aa13.29□□□□□ -0.28
CHMP1A-208ENST00000550102 DEFA5Q01523 94 aa13.29□□□□□ -0.28
CHMP1A-208ENST00000550102 RNASE10Q5GAN6 216 aaKnown RBP13.29□□□□□ -0.28
CHMP1A-208ENST00000550102 LPCAT3Q6P1A2 487 aa13.29□□□□□ -0.28
CHMP1A-208ENST00000550102 FAM223AQ8IWN6 122 aa13.29□□□□□ -0.28
CHMP1A-208ENST00000550102 OR52I2Q8NH67 350 aa13.29□□□□□ -0.28
CHMP1A-208ENST00000550102 DLX4Q92988 240 aaPredicted RBP13.29□□□□□ -0.28
CHMP1A-208ENST00000550102 USMG5Q96IX5 58 aa13.29□□□□□ -0.28
CHMP1A-208ENST00000550102 ZNF257Q9Y2Q1 563 aa13.29□□□□□ -0.28
CHMP1A-208ENST00000550102 SORL1Q92673 2214 aa13.28□□□□□ -0.28
CHMP1A-208ENST00000550102 DPPA5A6NC42 116 aa13.28□□□□□ -0.28
CHMP1A-208ENST00000550102 TEX22C9J3V5 150 aa13.28□□□□□ -0.28
CHMP1A-208ENST00000550102 M0QYG6 137 aa13.28□□□□□ -0.28
CHMP1A-208ENST00000550102 IFNA6P05013 189 aa13.28□□□□□ -0.28
CHMP1A-208ENST00000550102 ZNF735P0CB33 412 aa13.28□□□□□ -0.28
CHMP1A-208ENST00000550102 ZP3P21754 424 aa13.28□□□□□ -0.28
CHMP1A-208ENST00000550102 F2RP25116 425 aa13.28□□□□□ -0.28
CHMP1A-208ENST00000550102 RHOGP84095 191 aa13.28□□□□□ -0.28
CHMP1A-208ENST00000550102 DMBX1Q8NFW5 382 aa13.28□□□□□ -0.28
CHMP1A-208ENST00000550102 FCAMRQ8WWV6 532 aa13.28□□□□□ -0.28
CHMP1A-208ENST00000550102 ISOC1Q96CN7 298 aa13.28□□□□□ -0.28
CHMP1A-208ENST00000550102 FYTTD1Q96QD9 318 aaKnown RBP13.28□□□□□ -0.28
CHMP1A-208ENST00000550102 ABHD1Q96SE0 405 aa13.28□□□□□ -0.28
CHMP1A-208ENST00000550102 RANGRFQ9HD47 186 aaPredicted RBP13.28□□□□□ -0.28
CHMP1A-208ENST00000550102 KLK11Q9UBX7 282 aa13.28□□□□□ -0.28
CHMP1A-208ENST00000550102 MTFP1Q9UDX5 166 aa13.28□□□□□ -0.28
CHMP1A-208ENST00000550102 SCOCQ9UIL1 159 aa13.28□□□□□ -0.28
CHMP1A-208ENST00000550102 ANKRD34BA5PLL1 514 aa13.27□□□□□ -0.29
CHMP1A-208ENST00000550102 HMX3A6NHT5 357 aa13.27□□□□□ -0.29
CHMP1A-208ENST00000550102 H3BMQ9 156 aa13.27□□□□□ -0.29
CHMP1A-208ENST00000550102 IL6RP08887 468 aaPredicted RBP13.27□□□□□ -0.29
CHMP1A-208ENST00000550102 FGF2P09038 288 aa13.27□□□□□ -0.29
CHMP1A-208ENST00000550102 MRPS10P82664 201 aaKnown RBP13.27□□□□□ -0.29
CHMP1A-208ENST00000550102 DCTN2Q13561 401 aaKnown RBP13.27□□□□□ -0.29
CHMP1A-208ENST00000550102 PHLDA2Q53GA4 152 aa13.27□□□□□ -0.29
CHMP1A-208ENST00000550102 ZNF343Q6P1L6 599 aa13.27□□□□□ -0.29
CHMP1A-208ENST00000550102 SLC38A6Q8IZM9 456 aa13.27□□□□□ -0.29
CHMP1A-208ENST00000550102 ARRDC1Q8N5I2 433 aa13.27□□□□□ -0.29
CHMP1A-208ENST00000550102 TTC9CQ8N5M4 171 aa13.27□□□□□ -0.29
CHMP1A-208ENST00000550102 DGCR14Q96DF8 476 aaKnown RBP13.27□□□□□ -0.29
CHMP1A-208ENST00000550102 TMEM140Q9NV12 185 aa13.27□□□□□ -0.29
CHMP1A-208ENST00000550102 MARCH11A6NNE9 402 aa13.26□□□□□ -0.29
CHMP1A-208ENST00000550102 NPIPB5A8MRT5 1133 aa13.26□□□□□ -0.29
CHMP1A-208ENST00000550102 GABARAPH6UMI1 98 aa13.26□□□□□ -0.29
CHMP1A-208ENST00000550102 CTDSP2O14595 271 aa13.26□□□□□ -0.29
CHMP1A-208ENST00000550102 SAP30O75446 220 aa13.26□□□□□ -0.29
CHMP1A-208ENST00000550102 PRH1P02810 166 aa13.26□□□□□ -0.29
CHMP1A-208ENST00000550102 CD3DP04234 171 aa13.26□□□□□ -0.29
CHMP1A-208ENST00000550102 UCP3P55916 312 aa13.26□□□□□ -0.29
CHMP1A-208ENST00000550102 ZNF45Q02386 682 aa13.26□□□□□ -0.29
CHMP1A-208ENST00000550102 EXOSC2Q13868 293 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms