RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 KIR2DS2P43631 304 aa12.45□□□□□ -0.42
VPS29-207ENST00000549970 LSM3P62310 102 aaKnown RBP12.45□□□□□ -0.42
VPS29-207ENST00000549970 SLC25A42Q86VD7 318 aa12.45□□□□□ -0.42
VPS29-207ENST00000549970 Q8N1Y9 231 aa12.45□□□□□ -0.42
VPS29-207ENST00000549970 SLC5A7Q9GZV3 580 aa12.45□□□□□ -0.42
VPS29-207ENST00000549970 H0Y980 276 aa12.44□□□□□ -0.42
VPS29-207ENST00000549970 BMPR1BO00238 502 aa12.44□□□□□ -0.42
VPS29-207ENST00000549970 CSN3P07498 182 aa12.44□□□□□ -0.42
VPS29-207ENST00000549970 IL6RP08887 468 aaPredicted RBP12.44□□□□□ -0.42
VPS29-207ENST00000549970 IGHV4-30-4P0DP06 118 aa12.44□□□□□ -0.42
VPS29-207ENST00000549970 CBX5P45973 191 aa12.44□□□□□ -0.42
VPS29-207ENST00000549970 MSMO1Q15800 293 aa12.44□□□□□ -0.42
VPS29-207ENST00000549970 C15orf32Q32M92 178 aa12.44□□□□□ -0.42
VPS29-207ENST00000549970 TMEM17Q86X19 198 aa12.44□□□□□ -0.42
VPS29-207ENST00000549970 CROCCP3Q8IVE0 287 aa12.44□□□□□ -0.42
VPS29-207ENST00000549970 SPAG16Q8N0X2 631 aa12.44□□□□□ -0.42
VPS29-207ENST00000549970 NECAP1Q8NC96 275 aa12.44□□□□□ -0.42
VPS29-207ENST00000549970 S100A16Q96FQ6 103 aaKnown RBP12.44□□□□□ -0.42
VPS29-207ENST00000549970 VCX3AQ9NNX9 186 aa12.44□□□□□ -0.42
VPS29-207ENST00000549970 IFT46Q9NQC8 304 aa12.44□□□□□ -0.42
VPS29-207ENST00000549970 ZNF257Q9Y2Q1 563 aa12.44□□□□□ -0.42
VPS29-207ENST00000549970 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.43□□□□□ -0.42
VPS29-207ENST00000549970 A0A1B0GW64 132 aa12.43□□□□□ -0.42
VPS29-207ENST00000549970 SULT1C2O00338 296 aa12.43□□□□□ -0.42
VPS29-207ENST00000549970 XRCC3O43542 346 aa12.43□□□□□ -0.42
VPS29-207ENST00000549970 TMEM127O75204 238 aa12.43□□□□□ -0.42
VPS29-207ENST00000549970 MYOD1P15172 320 aa12.43□□□□□ -0.42
VPS29-207ENST00000549970 MAS1LP35410 378 aa12.43□□□□□ -0.42
VPS29-207ENST00000549970 RPS19P39019 145 aaKnown RBP12.43□□□□□ -0.42
VPS29-207ENST00000549970 RPL8P62917 257 aaKnown RBP12.43□□□□□ -0.42
VPS29-207ENST00000549970 UBE2NLQ5JXB2 153 aa12.43□□□□□ -0.42
VPS29-207ENST00000549970 SGPP2Q8IWX5 399 aa12.43□□□□□ -0.42
VPS29-207ENST00000549970 ZBTB34Q8NCN2 500 aa12.43□□□□□ -0.42
VPS29-207ENST00000549970 TSPAN14Q8NG11 270 aa12.43□□□□□ -0.42
VPS29-207ENST00000549970 OR5AP2Q8NGF4 316 aa12.43□□□□□ -0.42
VPS29-207ENST00000549970 YIPF6Q96EC8 236 aa12.43□□□□□ -0.42
VPS29-207ENST00000549970 ZMAT4Q9H898 229 aa12.43□□□□□ -0.42
VPS29-207ENST00000549970 HRASLSQ9HDD0 168 aa12.43□□□□□ -0.42
VPS29-207ENST00000549970 PEMTQ9UBM1 199 aa12.43□□□□□ -0.42
VPS29-207ENST00000549970 A0A087WXM4 84 aa12.42□□□□□ -0.42
VPS29-207ENST00000549970 NPIPB5A8MRT5 1133 aa12.42□□□□□ -0.42
VPS29-207ENST00000549970 PPP5D1E7EU14 171 aa12.42□□□□□ -0.42
VPS29-207ENST00000549970 ZNF735P0CB33 412 aa12.42□□□□□ -0.42
VPS29-207ENST00000549970 AREGP15514 252 aa12.42□□□□□ -0.42
VPS29-207ENST00000549970 HERV-K104P61576 105 aa12.42□□□□□ -0.42
VPS29-207ENST00000549970 CATR1Q13166 79 aa12.42□□□□□ -0.42
VPS29-207ENST00000549970 TMEM69Q5SWH9 247 aa12.42□□□□□ -0.42
VPS29-207ENST00000549970 OR4A47Q6IF82 309 aa12.42□□□□□ -0.42
VPS29-207ENST00000549970 LCN12Q6JVE5 192 aa12.42□□□□□ -0.42
VPS29-207ENST00000549970 ZNF818PQ6ZRF7 136 aa12.42□□□□□ -0.42
VPS29-207ENST00000549970 SAMD12Q8N8I0 201 aa12.42□□□□□ -0.42
VPS29-207ENST00000549970 OR51H1Q8NH63 302 aa12.42□□□□□ -0.42
VPS29-207ENST00000549970 GIMAP1Q8WWP7 306 aa12.42□□□□□ -0.42
VPS29-207ENST00000549970 SLC2A9Q9NRM0 540 aa12.42□□□□□ -0.42
VPS29-207ENST00000549970 BET1LQ9NYM9 111 aa12.42□□□□□ -0.42
VPS29-207ENST00000549970 SIGLEC8Q9NYZ4 499 aa12.42□□□□□ -0.42
VPS29-207ENST00000549970 EHFQ9NZC4 300 aa12.42□□□□□ -0.42
VPS29-207ENST00000549970 FBXL7Q9UJT9 491 aa12.42□□□□□ -0.42
VPS29-207ENST00000549970 IZUMO1RA6ND01 250 aa12.41□□□□□ -0.42
VPS29-207ENST00000549970 TNFAIP8O95379 198 aa12.41□□□□□ -0.42
VPS29-207ENST00000549970 IGHV3-23P01764 117 aa12.41□□□□□ -0.42
VPS29-207ENST00000549970 REG1AP05451 166 aa12.41□□□□□ -0.42
VPS29-207ENST00000549970 HLA-GP17693 338 aa12.41□□□□□ -0.42
VPS29-207ENST00000549970 TAS2R20P59543 309 aa12.41□□□□□ -0.42
VPS29-207ENST00000549970 AADACL3Q5VUY0 350 aa12.41□□□□□ -0.42
VPS29-207ENST00000549970 Q8N402 240 aa12.41□□□□□ -0.42
VPS29-207ENST00000549970 S4R3C0 116 aa12.41□□□□□ -0.42
VPS29-207ENST00000549970 RBFOX2O43251 390 aaKnown RBP eCLIP12.4□□□□□ -0.42
VPS29-207ENST00000549970 HPRT1P00492 218 aa12.4□□□□□ -0.42
VPS29-207ENST00000549970 HLA-AP01891 365 aaKnown RBP12.4□□□□□ -0.42
VPS29-207ENST00000549970 CRYGCP07315 174 aa12.4□□□□□ -0.42
VPS29-207ENST00000549970 PSMB6P28072 239 aa12.4□□□□□ -0.42
VPS29-207ENST00000549970 RFX2P48378 723 aa12.4□□□□□ -0.42
VPS29-207ENST00000549970 TAS2R31P59538 309 aa12.4□□□□□ -0.42
VPS29-207ENST00000549970 GTSCR1Q86UQ5 136 aa12.4□□□□□ -0.42
VPS29-207ENST00000549970 OR4A5Q8NH83 315 aa12.4□□□□□ -0.42
VPS29-207ENST00000549970 FANCD2OSQ96PS1 177 aa12.4□□□□□ -0.42
VPS29-207ENST00000549970 AIFM2Q9BRQ8 373 aa12.4□□□□□ -0.42
VPS29-207ENST00000549970 C19orf73Q9NVV2 129 aa12.4□□□□□ -0.42
VPS29-207ENST00000549970 TRAV3A0A0B4J244 114 aa12.39□□□□□ -0.43
VPS29-207ENST00000549970 CGB1A6NKQ9 187 aa12.39□□□□□ -0.43
VPS29-207ENST00000549970 A8MZ25 164 aa12.39□□□□□ -0.43
VPS29-207ENST00000549970 C3orf84H3BNL1 204 aa12.39□□□□□ -0.43
VPS29-207ENST00000549970 S1PR2O95136 353 aa12.39□□□□□ -0.43
VPS29-207ENST00000549970 NDUFB8O95169 186 aa12.39□□□□□ -0.43
VPS29-207ENST00000549970 DHFRP00374 187 aa12.39□□□□□ -0.43
VPS29-207ENST00000549970 PMP2P02689 132 aa12.39□□□□□ -0.43
VPS29-207ENST00000549970 DEFA4P12838 97 aa12.39□□□□□ -0.43
VPS29-207ENST00000549970 RPA2P15927 270 aa12.39□□□□□ -0.43
VPS29-207ENST00000549970 NQO2P16083 231 aa12.39□□□□□ -0.43
VPS29-207ENST00000549970 CTRB1P17538 263 aa12.39□□□□□ -0.43
VPS29-207ENST00000549970 GNRHRP30968 328 aa12.39□□□□□ -0.43
VPS29-207ENST00000549970 FAM209BQ5JX69 171 aa12.39□□□□□ -0.43
VPS29-207ENST00000549970 CTRB2Q6GPI1 263 aa12.39□□□□□ -0.43
VPS29-207ENST00000549970 DMBX1Q8NFW5 382 aa12.39□□□□□ -0.43
VPS29-207ENST00000549970 KCTD12Q96CX2 325 aaKnown RBP12.39□□□□□ -0.43
VPS29-207ENST00000549970 TM2D3Q9BRN9 247 aa12.39□□□□□ -0.43
VPS29-207ENST00000549970 ZNF2Q9BSG1 426 aaPredicted RBP12.39□□□□□ -0.43
VPS29-207ENST00000549970 THAP7Q9BT49 309 aaPredicted RBP12.39□□□□□ -0.43
VPS29-207ENST00000549970 DMRT1Q9Y5R6 373 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms