RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 OSTCQ9NRP0 149 aa3.16□□□□□ -1.9
RAB5B-207ENST00000549915 FGF21Q9NSA1 209 aa3.16□□□□□ -1.9
RAB5B-207ENST00000549915 C11orf21Q9P2W6 132 aa3.16□□□□□ -1.9
RAB5B-207ENST00000549915 ERRFI1Q9UJM3 462 aaPredicted RBP3.16□□□□□ -1.9
RAB5B-207ENST00000549915 MPC1Q9Y5U8 109 aa3.16□□□□□ -1.9
RAB5B-207ENST00000549915 CHCHD2Q9Y6H1 151 aaPredicted RBP3.16□□□□□ -1.9
RAB5B-207ENST00000549915 DOCK9Q9BZ29 2069 aa3.16□□□□□ -1.9
RAB5B-207ENST00000549915 GOLGA4Q13439 2230 aaKnown RBP3.15□□□□□ -1.9
RAB5B-207ENST00000549915 TRBV20OR9-2A0A075B6H5 130 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 TRAV9-2A0A087WT02 112 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 A0A1W2PR77 199 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 GRIFINA4D1Z8 144 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 DPRXA6NFQ7 191 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 ZNF716A6NP11 495 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 J3QT63 122 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 K7ERU9 68 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 ISLRO14498 428 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 CCL25O15444 150 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 RBFOX2O43251 390 aaKnown RBP eCLIP3.15□□□□□ -1.91
RAB5B-207ENST00000549915 TNFSF12O43508 249 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 RAMP3O60896 148 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 SS18L1O75177 396 aaPredicted RBP3.15□□□□□ -1.91
RAB5B-207ENST00000549915 HLA-DRB1P01911 266 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 AMY1AP04745 511 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 LIFP15018 202 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 EN2P19622 333 aaPredicted RBP3.15□□□□□ -1.91
RAB5B-207ENST00000549915 NPY1RP25929 384 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 CD27P26842 260 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 CD38P28907 300 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 SRD5A2P31213 254 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 APOBEC3AP31941 199 aaPredicted RBP3.15□□□□□ -1.91
RAB5B-207ENST00000549915 GABRA2P47869 451 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 ATP5G3P48201 142 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 REG1BP48304 166 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 SELENOVP59797 346 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 GNG3P63215 75 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 CX3CL1P78423 397 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 HTD2P86397 168 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 PSG4Q00888 419 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 PMP22Q01453 160 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 PLGLB1Q02325 96 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 TFF3Q07654 80 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 TRA2AQ13595 282 aaKnown RBP eCLIP3.15□□□□□ -1.91
RAB5B-207ENST00000549915 PDCD1Q15116 288 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 MMDQ15546 238 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 RAB30Q15771 203 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 CLEC12BQ2HXU8 276 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 HLA-BQ31612 363 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 ZNF718Q3SXZ3 478 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 PDLIM3Q53GG5 364 aaPredicted RBP3.15□□□□□ -1.91
RAB5B-207ENST00000549915 DMRTC1Q5HYR2 192 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 TMEM240Q5SV17 173 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 ABHD17BQ5VST6 288 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 PRAMEF20Q5VT98 475 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 RAET1LQ5VY80 246 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 ZNF497Q6ZNH5 498 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 C16orf47Q6ZP98 133 aaPredicted RBP3.15□□□□□ -1.91
RAB5B-207ENST00000549915 TCF23Q7RTU1 214 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 AAED1Q7RTV5 226 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 MYPOPQ86VE0 399 aaPredicted RBP3.15□□□□□ -1.91
RAB5B-207ENST00000549915 MCEMP1Q8IX19 187 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 MMD2Q8IY49 270 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 PRSS58Q8IYP2 241 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 FAM58AQ8N1B3 248 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 MUC15Q8N387 334 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 FGFRL1Q8N441 504 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 DRAM1Q8N682 238 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 ZNF645Q8N7E2 425 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 STPG4Q8N801 248 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 SCCPDHQ8NBX0 429 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 CPEB3Q8NE35 698 aaKnown RBP3.15□□□□□ -1.91
RAB5B-207ENST00000549915 OR2M7Q8NG81 312 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 OR52E5Q8NH55 327 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 RNASE8Q8TDE3 154 aaKnown RBP3.15□□□□□ -1.91
RAB5B-207ENST00000549915 WIPF2Q8TF74 440 aaPredicted RBP3.15□□□□□ -1.91
RAB5B-207ENST00000549915 BORCS7Q96B45 105 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 LRFN3Q9BTN0 628 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 CHRDL1Q9BU40 450 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 DEFB126Q9BYW3 111 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 COMMD5Q9GZQ3 224 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 SAP30LQ9HAJ7 183 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 GNB4Q9HAV0 340 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 ST20Q9HBF5 79 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 TMEM167BQ9NRX6 74 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 DLL3Q9NYJ7 618 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 MTCH1Q9NZJ7 389 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 SLC25A10Q9UBX3 287 aaPredicted RBP3.15□□□□□ -1.91
RAB5B-207ENST00000549915 KCNS2Q9ULS6 477 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 POLDIP2Q9Y2S7 368 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 CHTOPQ9Y3Y2 248 aaKnown RBP3.15□□□□□ -1.91
RAB5B-207ENST00000549915 RBM7Q9Y580 266 aaKnown RBP3.15□□□□□ -1.91
RAB5B-207ENST00000549915 ARHGEF17Q96PE2 2063 aaPredicted RBP3.15□□□□□ -1.91
RAB5B-207ENST00000549915 CUL9Q8IWT3 2517 aa3.15□□□□□ -1.91
RAB5B-207ENST00000549915 CHD8Q9HCK8 2581 aa3.14□□□□□ -1.91
RAB5B-207ENST00000549915 LOC105371242A0A075B767 164 aa3.14□□□□□ -1.91
RAB5B-207ENST00000549915 IGKV3D-15A0A087WSY6 115 aa3.14□□□□□ -1.91
RAB5B-207ENST00000549915 LOC102723996A0A087X1L8 192 aa3.14□□□□□ -1.91
RAB5B-207ENST00000549915 TRAV24A0A0B4J272 114 aa3.14□□□□□ -1.91
RAB5B-207ENST00000549915 TRGV8A0A0C4DH27 118 aa3.14□□□□□ -1.91
RAB5B-207ENST00000549915 IGHV3-20A0A0C4DH32 117 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms