RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 MAPK14Q16539 360 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 TAL2Q16559 108 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 TAF9Q16594 264 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 KRTAP13-3Q3SY46 172 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 ZNF684Q5T5D7 378 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 MRPL2Q5T653 305 aaKnown RBP2.36□□□□□ -2.03
PTCH1-216ENST00000548379 HMGN2P46Q86SG4 172 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 LRP11Q86VZ4 500 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 CALHM1Q8IU99 346 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 C10orf107Q8IVU9 208 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 C20orf196Q8IYI0 205 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 LRRC34Q8IZ02 419 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 CLECL1Q8IZS7 167 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 TMEM86BQ8N661 226 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 KRTCAP2Q8N6L1 136 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 OR52P1PQ8NH57 321 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 OR51A7Q8NH64 312 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 RCN3Q96D15 328 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 NEURL3Q96EH8 262 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 SPIN2AQ99865 258 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 SPIN2BQ9BPZ2 258 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 UQCC2Q9BRT2 126 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 KRTAP4-3Q9BYR4 195 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 HDHD2Q9H0R4 259 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 OR51B6Q9H340 312 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 REEP1Q9H902 201 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 ANK2Q01484 3957 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 ACANP16112 2415 aa2.36□□□□□ -2.03
PTCH1-216ENST00000548379 IGLV3-9A0A075B6K5 115 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 TRAV8-7A0A075B6U6 113 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 A0A087WUJ7 227 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 TRAV40A0A0B4J280 105 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 LOC102725191A0A1B0GVB3 256 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 ANKRD20A5PA0PJZ0 165 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 C5orf63A6NC05 138 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 GMNCA6NCL1 334 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 PRORSD1PA6NEY8 169 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 SMIM23A6NLE4 172 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 FTCDNL1E5RQL4 147 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 H0YJW9 148 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 HMGN4O00479 90 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 RBFOX2O43251 390 aaKnown RBP eCLIP2.35□□□□□ -2.03
PTCH1-216ENST00000548379 SLC16A7O60669 478 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 SNAP29O95721 258 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 IGHV1-46P01743 117 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 LINC00869P0C866 280 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 PSMB6P28072 239 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 GRPRP30550 384 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 RBM34P42696 430 aaKnown RBP2.35□□□□□ -2.03
PTCH1-216ENST00000548379 KIR3DL2P43630 455 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 GDI2P50395 445 aaKnown RBP2.35□□□□□ -2.03
PTCH1-216ENST00000548379 HCCSP53701 268 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 AQP5P55064 265 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 RPL31P62899 125 aaKnown RBP2.35□□□□□ -2.03
PTCH1-216ENST00000548379 DGCR6Q14129 220 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 WHAMMP3Q1A5X7 153 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 ABCA11PQ4W5N1 156 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 TMEM155Q4W5P6 130 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 SMUG1Q53HV7 270 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 AP1ARQ63HQ0 302 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 KRTAP5-2Q701N4 177 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 OLIG3Q7RTU3 272 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 CYP4Z1Q86W10 505 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 IFT20Q8IY31 132 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 SLC22A24Q8N4F4 322 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 LINC00469Q8N7U9 141 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 DEFB108BQ8NET1 73 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 OR4K5Q8NGD3 323 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 OR8J2Q8NGG1 315 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 C17orf50Q8WW18 174 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 SLC35B4Q969S0 331 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 TESCQ96BS2 214 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 FLYWCH2Q96CP2 140 aaKnown RBP2.35□□□□□ -2.03
PTCH1-216ENST00000548379 SGTBQ96EQ0 304 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 ZNF75AQ96N20 296 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 EMC6Q9BV81 110 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 RSPO3Q9BXY4 272 aaPredicted RBP2.35□□□□□ -2.03
PTCH1-216ENST00000548379 SLC38A1Q9H2H9 487 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 TMEM27Q9HBJ8 222 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 CYTL1Q9NRR1 136 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 TMEM106BQ9NUM4 274 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 VAPAQ9P0L0 249 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 ZNF443Q9Y2A4 671 aaPredicted RBP2.35□□□□□ -2.03
PTCH1-216ENST00000548379 OR51B2Q9Y5P1 312 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 INSIG2Q9Y5U4 225 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 MEGF8Q7Z7M0 2845 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 MXRA5Q9NR99 2828 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 SPTBP11277 2137 aa2.35□□□□□ -2.03
PTCH1-216ENST00000548379 A0A0B4J2E0 115 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 SPRR5A0A1B0GTR4 108 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 A0A1W2PRG6 482 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 C5orf49A4QMS7 147 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 KRBOX1C9JBD0 128 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 H3BSA7 217 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 H7C2Y5 167 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 TOR1AO14656 332 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 GATCO43716 136 aaKnown RBP2.34□□□□□ -2.03
PTCH1-216ENST00000548379 ENSAO43768 121 aaKnown RBP2.34□□□□□ -2.03
PTCH1-216ENST00000548379 SERPINB7O75635 380 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 HLA-DQA1P01909 254 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms