RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 H0YJW9 148 aa17.05■□□□□ 0.32
RITA1-201ENST00000548278 SERF2P84101 59 aa17.05■□□□□ 0.32
RITA1-201ENST00000548278 FAM71F2Q6NXP2 309 aa17.05■□□□□ 0.32
RITA1-201ENST00000548278 DTX2Q86UW9 622 aa17.05■□□□□ 0.32
RITA1-201ENST00000548278 SVBPQ8N300 66 aa17.05■□□□□ 0.32
RITA1-201ENST00000548278 CLCC1Q96S66 551 aa17.05■□□□□ 0.32
RITA1-201ENST00000548278 TLE4Q04727 773 aa17.05■□□□□ 0.32
RITA1-201ENST00000548278 CENPVQ7Z7K6 275 aaPredicted RBP17.05■□□□□ 0.32
RITA1-201ENST00000548278 ABHD12Q8N2K0 398 aa17.05■□□□□ 0.32
RITA1-201ENST00000548278 OR9G1Q8NH87 305 aa17.05■□□□□ 0.32
RITA1-201ENST00000548278 NEU4Q8WWR8 484 aaPredicted RBP17.05■□□□□ 0.32
RITA1-201ENST00000548278 TMEM186Q96B77 213 aa17.05■□□□□ 0.32
RITA1-201ENST00000548278 HEYLQ9NQ87 328 aaPredicted RBP17.05■□□□□ 0.32
RITA1-201ENST00000548278 RPRMQ9NS64 109 aa17.05■□□□□ 0.32
RITA1-201ENST00000548278 TIMM9Q9Y5J7 89 aa17.05■□□□□ 0.32
RITA1-201ENST00000548278 A0A1B0GW64 132 aa17.04■□□□□ 0.32
RITA1-201ENST00000548278 BTBD17A6NE02 478 aa17.04■□□□□ 0.32
RITA1-201ENST00000548278 F12P00748 615 aaPredicted RBP17.04■□□□□ 0.32
RITA1-201ENST00000548278 ZNF137PP52743 207 aa17.04■□□□□ 0.32
RITA1-201ENST00000548278 HSPE1P61604 102 aaKnown RBP17.04■□□□□ 0.32
RITA1-201ENST00000548278 DIAPH2-AS1Q14236 149 aa17.04■□□□□ 0.32
RITA1-201ENST00000548278 PEA15Q15121 130 aa17.04■□□□□ 0.32
RITA1-201ENST00000548278 PUSL1Q8N0Z8 303 aaKnown RBP17.04■□□□□ 0.32
RITA1-201ENST00000548278 TMEM133Q9H2Q1 129 aa17.04■□□□□ 0.32
RITA1-201ENST00000548278 VSIRQ9H7M9 311 aa17.04■□□□□ 0.32
RITA1-201ENST00000548278 SCAF4O95104 1147 aaKnown RBP17.03■□□□□ 0.32
RITA1-201ENST00000548278 APOA2P02652 100 aa17.03■□□□□ 0.32
RITA1-201ENST00000548278 REG1BP48304 166 aa17.03■□□□□ 0.32
RITA1-201ENST00000548278 RPP30P78346 268 aaKnown RBP17.03■□□□□ 0.32
RITA1-201ENST00000548278 TAGLNQ01995 201 aaKnown RBP17.03■□□□□ 0.32
RITA1-201ENST00000548278 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.03■□□□□ 0.32
RITA1-201ENST00000548278 SFT2D1Q8WV19 159 aa17.03■□□□□ 0.32
RITA1-201ENST00000548278 NKX6-2Q9C056 277 aaPredicted RBP17.03■□□□□ 0.32
RITA1-201ENST00000548278 EIF5A2Q9GZV4 153 aaKnown RBP17.03■□□□□ 0.32
RITA1-201ENST00000548278 UPK2O00526 184 aa17.03■□□□□ 0.32
RITA1-201ENST00000548278 IFNA10P01566 189 aa17.03■□□□□ 0.32
RITA1-201ENST00000548278 MDKP21741 143 aaPredicted RBP17.03■□□□□ 0.32
RITA1-201ENST00000548278 OSR1Q8TAX0 266 aaPredicted RBP17.03■□□□□ 0.32
RITA1-201ENST00000548278 NABP2Q9BQ15 211 aa17.03■□□□□ 0.32
RITA1-201ENST00000548278 PBDC1Q9BVG4 233 aa17.03■□□□□ 0.32
RITA1-201ENST00000548278 MIOXQ9UGB7 285 aa17.03■□□□□ 0.32
RITA1-201ENST00000548278 PRNDQ9UKY0 176 aa17.03■□□□□ 0.32
RITA1-201ENST00000548278 TNCP24821 2201 aa17.02■□□□□ 0.32
RITA1-201ENST00000548278 HOXA1P49639 335 aaPredicted RBP17.02■□□□□ 0.32
RITA1-201ENST00000548278 C8orf46Q8TAG6 207 aa17.02■□□□□ 0.32
RITA1-201ENST00000548278 TMEM170AQ8WVE7 144 aa17.02■□□□□ 0.32
RITA1-201ENST00000548278 PRELID1Q9Y255 219 aa17.02■□□□□ 0.32
RITA1-201ENST00000548278 DCHS2Q6V1P9 2916 aa17.02■□□□□ 0.31
RITA1-201ENST00000548278 TRAV1-1A0A0B4J248 108 aa17.01■□□□□ 0.31
RITA1-201ENST00000548278 RRHO14718 337 aa17.01■□□□□ 0.31
RITA1-201ENST00000548278 TMEM177Q53S58 311 aa17.01■□□□□ 0.31
RITA1-201ENST00000548278 WDR25Q64LD2 544 aaPredicted RBP17.01■□□□□ 0.31
RITA1-201ENST00000548278 OR8B3Q8NGG8 313 aa17.01■□□□□ 0.31
RITA1-201ENST00000548278 NEIL1Q96FI4 390 aaPredicted RBP17.01■□□□□ 0.31
RITA1-201ENST00000548278 OR8B2Q96RD0 313 aa17.01■□□□□ 0.31
RITA1-201ENST00000548278 AIFM2Q9BRQ8 373 aa17.01■□□□□ 0.31
RITA1-201ENST00000548278 BET1LQ9NYM9 111 aa17.01■□□□□ 0.31
RITA1-201ENST00000548278 OR51B2Q9Y5P1 312 aa17.01■□□□□ 0.31
RITA1-201ENST00000548278 H7C2Y5 167 aa17.01■□□□□ 0.31
RITA1-201ENST00000548278 SAA1P0DJI8 122 aaPredicted RBP17.01■□□□□ 0.31
RITA1-201ENST00000548278 MYOD1P15172 320 aa17.01■□□□□ 0.31
RITA1-201ENST00000548278 FGF7P21781 194 aa17.01■□□□□ 0.31
RITA1-201ENST00000548278 PPT1P50897 306 aa17.01■□□□□ 0.31
RITA1-201ENST00000548278 RAB1CQ92928 201 aa17.01■□□□□ 0.31
RITA1-201ENST00000548278 KIAA1456Q9P272 454 aa17.01■□□□□ 0.31
RITA1-201ENST00000548278 PRSS46E5RG02 174 aa17■□□□□ 0.31
RITA1-201ENST00000548278 C19orf84I3L1E1 186 aa17■□□□□ 0.31
RITA1-201ENST00000548278 HBE1P02100 147 aa17■□□□□ 0.31
RITA1-201ENST00000548278 ZNF726P1Q15940 193 aa17■□□□□ 0.31
RITA1-201ENST00000548278 TMEM41BQ5BJD5 291 aa17■□□□□ 0.31
RITA1-201ENST00000548278 ETV3LQ6ZN32 361 aa17■□□□□ 0.31
RITA1-201ENST00000548278 TIMD4Q96H15 378 aa17■□□□□ 0.31
RITA1-201ENST00000548278 ZNF257Q9Y2Q1 563 aa17■□□□□ 0.31
RITA1-201ENST00000548278 PPIAL4CA0A0B4J2A2 164 aa17■□□□□ 0.31
RITA1-201ENST00000548278 PPIAL4GP0DN37 164 aa17■□□□□ 0.31
RITA1-201ENST00000548278 LHX4Q969G2 390 aa17■□□□□ 0.31
RITA1-201ENST00000548278 HARBI1Q96MB7 349 aa17■□□□□ 0.31
RITA1-201ENST00000548278 RARRES2Q99969 163 aa17■□□□□ 0.31
RITA1-201ENST00000548278 RBFOX3A6NFN3 312 aa16.99■□□□□ 0.31
RITA1-201ENST00000548278 KBTBD11O94819 623 aa16.99■□□□□ 0.31
RITA1-201ENST00000548278 RBP4P02753 201 aa16.99■□□□□ 0.31
RITA1-201ENST00000548278 ELLP55199 621 aaPredicted RBP16.99■□□□□ 0.31
RITA1-201ENST00000548278 HNF4GQ14541 408 aa16.99■□□□□ 0.31
RITA1-201ENST00000548278 PDPNQ86YL7 162 aa16.99■□□□□ 0.31
RITA1-201ENST00000548278 MBD3L1Q8WWY6 194 aa16.99■□□□□ 0.31
RITA1-201ENST00000548278 TNFRSF14Q92956 283 aa16.99■□□□□ 0.31
RITA1-201ENST00000548278 FLYWCH2Q96CP2 140 aaKnown RBP16.99■□□□□ 0.31
RITA1-201ENST00000548278 RCC1LQ96I51 464 aaKnown RBP16.99■□□□□ 0.31
RITA1-201ENST00000548278 PCGF1Q9BSM1 259 aa16.99■□□□□ 0.31
RITA1-201ENST00000548278 NPCDR1Q9BY65 106 aa16.99■□□□□ 0.31
RITA1-201ENST00000548278 ACACBO00763 2458 aa16.99■□□□□ 0.31
RITA1-201ENST00000548278 IGHV2-26A0A0B4J1V2 119 aa16.98■□□□□ 0.31
RITA1-201ENST00000548278 A0A1W2PPH5 198 aa16.98■□□□□ 0.31
RITA1-201ENST00000548278 DNASE2O00115 360 aaPredicted RBP16.98■□□□□ 0.31
RITA1-201ENST00000548278 DLX1P56177 255 aa16.98■□□□□ 0.31
RITA1-201ENST00000548278 ACSM6Q6P461 480 aa16.98■□□□□ 0.31
RITA1-201ENST00000548278 SSX7Q7RTT5 188 aa16.98■□□□□ 0.31
RITA1-201ENST00000548278 TGIF2LXQ8IUE1 241 aa16.98■□□□□ 0.31
RITA1-201ENST00000548278 SMDT1Q9H4I9 107 aa16.98■□□□□ 0.31
RITA1-201ENST00000548278 SNAPINO95295 136 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms