RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 OPN1MW2P0DN77 364 aa13.62□□□□□ -0.23
KRT4-201ENST00000548097 OPN1MW3P0DN78 364 aa13.62□□□□□ -0.23
KRT4-201ENST00000548097 OR2B8PP59922 312 aa13.62□□□□□ -0.23
KRT4-201ENST00000548097 UBE2KP61086 200 aa13.62□□□□□ -0.23
KRT4-201ENST00000548097 ERVK-16P61578 105 aa13.62□□□□□ -0.23
KRT4-201ENST00000548097 UBA52P62987 128 aaKnown RBP13.62□□□□□ -0.23
KRT4-201ENST00000548097 C5orf64Q2M2E5 130 aa13.62□□□□□ -0.23
KRT4-201ENST00000548097 VMA21Q3ZAQ7 101 aa13.62□□□□□ -0.23
KRT4-201ENST00000548097 C9orf152Q5JTZ5 239 aa13.62□□□□□ -0.23
KRT4-201ENST00000548097 Q6ZRM9 215 aa13.62□□□□□ -0.23
KRT4-201ENST00000548097 PUSL1Q8N0Z8 303 aaKnown RBP13.62□□□□□ -0.23
KRT4-201ENST00000548097 MINDY2Q8NBR6 621 aa13.62□□□□□ -0.23
KRT4-201ENST00000548097 OR2A7Q96R45 310 aa13.62□□□□□ -0.23
KRT4-201ENST00000548097 RNF5Q99942 180 aa13.62□□□□□ -0.23
KRT4-201ENST00000548097 RANBP3Q9H6Z4 567 aaPredicted RBP13.62□□□□□ -0.23
KRT4-201ENST00000548097 GPN1Q9HCN4 374 aaPredicted RBP13.62□□□□□ -0.23
KRT4-201ENST00000548097 DBX1A6NMT0 343 aa13.61□□□□□ -0.23
KRT4-201ENST00000548097 NXPH3O95157 252 aa13.61□□□□□ -0.23
KRT4-201ENST00000548097 GNB1P62873 340 aa13.61□□□□□ -0.23
KRT4-201ENST00000548097 H2BFWTQ7Z2G1 175 aa13.61□□□□□ -0.23
KRT4-201ENST00000548097 FAM219AQ8IW50 185 aa13.61□□□□□ -0.23
KRT4-201ENST00000548097 TMEM86BQ8N661 226 aa13.61□□□□□ -0.23
KRT4-201ENST00000548097 GPR146Q96CH1 333 aa13.61□□□□□ -0.23
KRT4-201ENST00000548097 RASL11BQ9BPW5 248 aa13.61□□□□□ -0.23
KRT4-201ENST00000548097 HSPB9Q9BQS6 159 aa13.61□□□□□ -0.23
KRT4-201ENST00000548097 C7orf66A4D0T2 115 aa13.6□□□□□ -0.23
KRT4-201ENST00000548097 LINC01548A6NM66 108 aa13.6□□□□□ -0.23
KRT4-201ENST00000548097 KBTBD11O94819 623 aa13.6□□□□□ -0.23
KRT4-201ENST00000548097 CA2P00918 260 aa13.6□□□□□ -0.23
KRT4-201ENST00000548097 C10orf55Q5SWW7 151 aa13.6□□□□□ -0.23
KRT4-201ENST00000548097 GGNBP1Q5YKI7 109 aa13.6□□□□□ -0.23
KRT4-201ENST00000548097 PPP1R27Q86WC6 154 aa13.6□□□□□ -0.23
KRT4-201ENST00000548097 LRTM2Q8N967 370 aa13.6□□□□□ -0.23
KRT4-201ENST00000548097 RRNAD1Q96FB5 475 aaKnown RBP13.6□□□□□ -0.23
KRT4-201ENST00000548097 OR51J1Q9H342 316 aa13.6□□□□□ -0.23
KRT4-201ENST00000548097 ZNF430Q9H8G1 570 aaPredicted RBP13.6□□□□□ -0.23
KRT4-201ENST00000548097 C1RLQ9NZP8 487 aa13.6□□□□□ -0.23
KRT4-201ENST00000548097 A0A0B4J2A0 478 aa13.6□□□□□ -0.23
KRT4-201ENST00000548097 SSNA1O43805 119 aa13.6□□□□□ -0.23
KRT4-201ENST00000548097 P0C879 139 aa13.6□□□□□ -0.23
KRT4-201ENST00000548097 SRPXP78539 464 aa13.6□□□□□ -0.23
KRT4-201ENST00000548097 POU2AF1Q16633 256 aa13.6□□□□□ -0.23
KRT4-201ENST00000548097 IL22RA2Q969J5 263 aa13.6□□□□□ -0.23
KRT4-201ENST00000548097 SHPKQ9UHJ6 478 aa13.6□□□□□ -0.23
KRT4-201ENST00000548097 hCG_2014768A0A024R1R8 64 aa13.59□□□□□ -0.23
KRT4-201ENST00000548097 SNRPGP15A8MWD9 76 aa13.59□□□□□ -0.23
KRT4-201ENST00000548097 SPDEFO95238 335 aa13.59□□□□□ -0.23
KRT4-201ENST00000548097 SIX6O95475 246 aa13.59□□□□□ -0.23
KRT4-201ENST00000548097 RNASE1P07998 156 aaKnown RBP13.59□□□□□ -0.23
KRT4-201ENST00000548097 SSBP2P81877 361 aaPredicted RBP13.59□□□□□ -0.23
KRT4-201ENST00000548097 NMSQ5H8A3 153 aa13.59□□□□□ -0.23
KRT4-201ENST00000548097 TEX45Q8NA69 505 aa13.59□□□□□ -0.23
KRT4-201ENST00000548097 OR8H1Q8NGG4 311 aa13.59□□□□□ -0.23
KRT4-201ENST00000548097 FAM103A1Q9BTL3 118 aaKnown RBP13.59□□□□□ -0.23
KRT4-201ENST00000548097 BET1LQ9NYM9 111 aa13.59□□□□□ -0.23
KRT4-201ENST00000548097 MMP24Q9Y5R2 645 aa13.59□□□□□ -0.23
KRT4-201ENST00000548097 TNCP24821 2201 aa13.59□□□□□ -0.23
KRT4-201ENST00000548097 JMJD1CQ15652 2540 aa13.58□□□□□ -0.24
KRT4-201ENST00000548097 FAM25EA8MYX2 175 aa13.58□□□□□ -0.24
KRT4-201ENST00000548097 E7EUB6 86 aa13.58□□□□□ -0.24
KRT4-201ENST00000548097 CLDN34H7C241 214 aa13.58□□□□□ -0.24
KRT4-201ENST00000548097 UPK2O00526 184 aa13.58□□□□□ -0.24
KRT4-201ENST00000548097 IL6RP08887 468 aaPredicted RBP13.58□□□□□ -0.24
KRT4-201ENST00000548097 APELAP0DMC3 54 aa13.58□□□□□ -0.24
KRT4-201ENST00000548097 VDAC1P21796 283 aa13.58□□□□□ -0.24
KRT4-201ENST00000548097 RELBQ01201 579 aa13.58□□□□□ -0.24
KRT4-201ENST00000548097 TNXAQ16473 311 aa13.58□□□□□ -0.24
KRT4-201ENST00000548097 PRSS8Q16651 343 aa13.58□□□□□ -0.24
KRT4-201ENST00000548097 TMEM95Q3KNT9 176 aa13.58□□□□□ -0.24
KRT4-201ENST00000548097 Q6ZNX1 250 aa13.58□□□□□ -0.24
KRT4-201ENST00000548097 TMEM167AQ8TBQ9 72 aa13.58□□□□□ -0.24
KRT4-201ENST00000548097 OR10C1Q96KK4 312 aa13.58□□□□□ -0.24
KRT4-201ENST00000548097 CACNG5Q9UF02 275 aa13.58□□□□□ -0.24
KRT4-201ENST00000548097 LINC00527Q9UJ94 153 aa13.58□□□□□ -0.24
KRT4-201ENST00000548097 SETD2Q9BYW2 2564 aaPredicted RBP13.58□□□□□ -0.24
KRT4-201ENST00000548097 TET2Q6N021 2002 aaPredicted RBP13.57□□□□□ -0.24
KRT4-201ENST00000548097 C13orf42A0A1B0GVH6 325 aa13.57□□□□□ -0.24
KRT4-201ENST00000548097 GOSR2O14653 212 aa13.57□□□□□ -0.24
KRT4-201ENST00000548097 FGF16O43320 207 aa13.57□□□□□ -0.24
KRT4-201ENST00000548097 RBMXL2O75526 392 aaKnown RBP13.57□□□□□ -0.24
KRT4-201ENST00000548097 NDPQ00604 133 aa13.57□□□□□ -0.24
KRT4-201ENST00000548097 SPINK9Q5DT21 86 aa13.57□□□□□ -0.24
KRT4-201ENST00000548097 C16orf82Q7Z2V1 217 aa13.57□□□□□ -0.24
KRT4-201ENST00000548097 LURAP1LQ8IV03 231 aa13.57□□□□□ -0.24
KRT4-201ENST00000548097 VSTM2AQ8TAG5 236 aa13.57□□□□□ -0.24
KRT4-201ENST00000548097 WDR89Q96FK6 387 aaPredicted RBP13.57□□□□□ -0.24
KRT4-201ENST00000548097 JMJD8Q96S16 334 aa13.57□□□□□ -0.24
KRT4-201ENST00000548097 QTRT1Q9BXR0 403 aaKnown RBP13.57□□□□□ -0.24
KRT4-201ENST00000548097 IGHV7-81A0A0B4J1V7 117 aa13.57□□□□□ -0.24
KRT4-201ENST00000548097 ATG12O94817 140 aa13.57□□□□□ -0.24
KRT4-201ENST00000548097 CX3CL1P78423 397 aa13.57□□□□□ -0.24
KRT4-201ENST00000548097 LSM10Q969L4 123 aaKnown RBP13.57□□□□□ -0.24
KRT4-201ENST00000548097 AIFM2Q9BRQ8 373 aa13.57□□□□□ -0.24
KRT4-201ENST00000548097 FBXO7Q9Y3I1 522 aa13.57□□□□□ -0.24
KRT4-201ENST00000548097 TRIM77I1YAP6 450 aa13.56□□□□□ -0.24
KRT4-201ENST00000548097 RPL8P62917 257 aaKnown RBP13.56□□□□□ -0.24
KRT4-201ENST00000548097 PRIMA1Q86XR5 153 aa13.56□□□□□ -0.24
KRT4-201ENST00000548097 OR4A16Q8NH70 328 aa13.56□□□□□ -0.24
KRT4-201ENST00000548097 TMED3Q9Y3Q3 217 aa13.56□□□□□ -0.24
KRT4-201ENST00000548097 CNIH1O95406 144 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms