RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, human

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF1-210	ENST00000547374	TRAV1-1	A0A0B4J248	108 aa		10.84	□□□□□ -0.67
BRF1-210	ENST00000547374		M0R1B8	84 aa		10.84	□□□□□ -0.67
BRF1-210	ENST00000547374	MLNR	O43193	412 aa		10.84	□□□□□ -0.67
BRF1-210	ENST00000547374	NUPR1	O60356	82 aa		10.84	□□□□□ -0.67
BRF1-210	ENST00000547374	CD82	P27701	267 aa		10.84	□□□□□ -0.67
BRF1-210	ENST00000547374	KRTAP27-1	Q3LI81	207 aa		10.84	□□□□□ -0.67
BRF1-210	ENST00000547374	MRPL54	Q6P161	138 aa	Known RBP	10.84	□□□□□ -0.67
BRF1-210	ENST00000547374	TMEM14EP	Q6UXP3	125 aa		10.84	□□□□□ -0.67
BRF1-210	ENST00000547374	MOB3B	Q86TA1	216 aa		10.84	□□□□□ -0.67
BRF1-210	ENST00000547374	OPN3	Q9H1Y3	402 aa	Predicted RBP	10.84	□□□□□ -0.67
BRF1-210	ENST00000547374	MS4A5	Q9H3V2	200 aa		10.84	□□□□□ -0.67
BRF1-210	ENST00000547374		B4E171	279 aa		10.84	□□□□□ -0.67
BRF1-210	ENST00000547374	TSPAN7	P41732	249 aa		10.84	□□□□□ -0.67
BRF1-210	ENST00000547374	REG1B	P48304	166 aa		10.84	□□□□□ -0.67
BRF1-210	ENST00000547374	FOXF2	Q12947	444 aa		10.84	□□□□□ -0.67
BRF1-210	ENST00000547374	CIB3	Q96Q77	187 aa	Predicted RBP	10.84	□□□□□ -0.67
BRF1-210	ENST00000547374	HCFC1	P51610	2035 aa		10.84	□□□□□ -0.67
BRF1-210	ENST00000547374	FOXH1	O75593	365 aa		10.83	□□□□□ -0.68
BRF1-210	ENST00000547374	FRMD6-AS1	P0C7T7	363 aa		10.83	□□□□□ -0.68
BRF1-210	ENST00000547374	JOSD1	Q15040	202 aa	Predicted RBP	10.83	□□□□□ -0.68
BRF1-210	ENST00000547374	DOLPP1	Q86YN1	238 aa		10.83	□□□□□ -0.68
BRF1-210	ENST00000547374	CLDN14	O95500	239 aa		10.83	□□□□□ -0.68
BRF1-210	ENST00000547374	PRDX2	P32119	198 aa		10.83	□□□□□ -0.68
BRF1-210	ENST00000547374	SMIM21	Q3B7S5	101 aa		10.83	□□□□□ -0.68
BRF1-210	ENST00000547374	UTF1	Q5T230	341 aa		10.83	□□□□□ -0.68
BRF1-210	ENST00000547374	FER1L6-AS2	Q96M78	137 aa		10.83	□□□□□ -0.68
BRF1-210	ENST00000547374	PARD6A	Q9NPB6	346 aa		10.83	□□□□□ -0.68
BRF1-210	ENST00000547374	HSPB7	Q9UBY9	170 aa		10.83	□□□□□ -0.68
BRF1-210	ENST00000547374	PIGBOS1	A0A0B4J2F0	54 aa		10.83	□□□□□ -0.68
BRF1-210	ENST00000547374		A6NNC1	897 aa		10.83	□□□□□ -0.68
BRF1-210	ENST00000547374	RND2	P52198	227 aa		10.83	□□□□□ -0.68
BRF1-210	ENST00000547374	PRB3	Q04118	309 aa	Predicted RBP	10.83	□□□□□ -0.68
BRF1-210	ENST00000547374	PSG5	Q15238	335 aa		10.83	□□□□□ -0.68
BRF1-210	ENST00000547374		Q6ZS49	121 aa		10.83	□□□□□ -0.68
BRF1-210	ENST00000547374	OR10G8	Q8NGN5	311 aa		10.83	□□□□□ -0.68
BRF1-210	ENST00000547374	ACY3	Q96HD9	319 aa		10.83	□□□□□ -0.68
BRF1-210	ENST00000547374	BTF3L4	Q96K17	158 aa		10.83	□□□□□ -0.68
BRF1-210	ENST00000547374	COLQ	Q9Y215	455 aa	Predicted RBP	10.83	□□□□□ -0.68
BRF1-210	ENST00000547374	RBFOX2	O43251	390 aa	Known RBP eCLIP	10.82	□□□□□ -0.68	1e-8	■■■■□ 22.2
BRF1-210	ENST00000547374	TOX4	O94842	621 aa		10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	PLAU	P00749	431 aa		10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	COX5B	P10606	129 aa		10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	RPL31	P62899	125 aa	Known RBP	10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	MLANA	Q16655	118 aa		10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	ZNF718	Q3SXZ3	478 aa		10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	OCC1	Q8TAD7	63 aa		10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	CMTM2	Q8TAZ6	248 aa		10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	TAAR6	Q96RI8	345 aa		10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	HSPB9	Q9BQS6	159 aa		10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	OR6C3	Q9NZP0	311 aa		10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	NAV3	Q8IVL0	2385 aa		10.82	□□□□□ -0.68
BRF1-210	ENST00000547374		A0A1W2PNU3	283 aa	Predicted RBP	10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	SLC31A2	O15432	143 aa		10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	ZNF25	P17030	456 aa	Predicted RBP	10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	IQCJ	Q1A5X6	159 aa		10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	LINC00596	Q86U02	117 aa		10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	OR8I2	Q8N0Y5	310 aa		10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	SEPSECS	Q9HD40	501 aa	Known RBP	10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	NAT8B	Q9UHF3	227 aa		10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	SNURFL	B1AK76	121 aa		10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	LINC01551	Q86U37	167 aa		10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	ATOH7	Q8N100	152 aa		10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	ZCCHC24	Q8N2G6	241 aa	Known RBP	10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	UHRF2	Q96PU4	802 aa		10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	CEP295	Q9C0D2	2601 aa		10.82	□□□□□ -0.68
BRF1-210	ENST00000547374	TMEM250	H0YL14	139 aa		10.81	□□□□□ -0.68
BRF1-210	ENST00000547374	CGA	P01215	116 aa		10.81	□□□□□ -0.68
BRF1-210	ENST00000547374	TEX38	Q6PEX7	206 aa		10.81	□□□□□ -0.68
BRF1-210	ENST00000547374		Q8NFD4	153 aa		10.81	□□□□□ -0.68
BRF1-210	ENST00000547374	CA1	P00915	261 aa	Predicted RBP	10.81	□□□□□ -0.68
BRF1-210	ENST00000547374	CRISP2	P16562	243 aa		10.81	□□□□□ -0.68
BRF1-210	ENST00000547374	ADM	P35318	185 aa		10.81	□□□□□ -0.68
BRF1-210	ENST00000547374	ACP7	Q6ZNF0	438 aa		10.81	□□□□□ -0.68
BRF1-210	ENST00000547374	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	10.81	□□□□□ -0.68
BRF1-210	ENST00000547374	TGOLN2	O43493	480 aa		10.81	□□□□□ -0.68
BRF1-210	ENST00000547374	CYC1	P08574	325 aa		10.81	□□□□□ -0.68
BRF1-210	ENST00000547374	CECR9	P0C854	216 aa		10.81	□□□□□ -0.68
BRF1-210	ENST00000547374	CRYBB3	P26998	211 aa		10.81	□□□□□ -0.68
BRF1-210	ENST00000547374	ATP6V1F	Q16864	119 aa		10.81	□□□□□ -0.68
BRF1-210	ENST00000547374	WDR82	Q6UXN9	313 aa		10.81	□□□□□ -0.68
BRF1-210	ENST00000547374	DEFB123	Q8N688	67 aa		10.81	□□□□□ -0.68
BRF1-210	ENST00000547374	TMEM178A	Q8NBL3	297 aa		10.81	□□□□□ -0.68
BRF1-210	ENST00000547374	ANAPC16	Q96DE5	110 aa		10.81	□□□□□ -0.68
BRF1-210	ENST00000547374	SFRP2	Q96HF1	295 aa		10.81	□□□□□ -0.68
BRF1-210	ENST00000547374	TMEM140	Q9NV12	185 aa		10.81	□□□□□ -0.68
BRF1-210	ENST00000547374	IGHV3-21	A0A0B4J1V1	117 aa		10.8	□□□□□ -0.68
BRF1-210	ENST00000547374	C15orf62	A8K5M9	175 aa		10.8	□□□□□ -0.68
BRF1-210	ENST00000547374	MAS1L	P35410	378 aa		10.8	□□□□□ -0.68
BRF1-210	ENST00000547374	HLA-DRB5	Q30154	266 aa		10.8	□□□□□ -0.68
BRF1-210	ENST00000547374	TDRG1	Q3Y452	100 aa		10.8	□□□□□ -0.68
BRF1-210	ENST00000547374	DUX4L9	Q6RFH8	374 aa	Predicted RBP	10.8	□□□□□ -0.68
BRF1-210	ENST00000547374	SSBP3	Q9BWW4	388 aa	Predicted RBP	10.8	□□□□□ -0.68
BRF1-210	ENST00000547374	KIAA1549	Q9HCM3	1950 aa		10.8	□□□□□ -0.68
BRF1-210	ENST00000547374	BRWD1-AS2	P59051	145 aa		10.8	□□□□□ -0.68
BRF1-210	ENST00000547374	SUMO1	P63165	101 aa	Known RBP	10.8	□□□□□ -0.68
BRF1-210	ENST00000547374	UBALD2	Q8IYN6	164 aa		10.8	□□□□□ -0.68
BRF1-210	ENST00000547374	CXXC4	Q9H2H0	198 aa		10.8	□□□□□ -0.68
BRF1-210	ENST00000547374	IGFBP2	P18065	325 aa		10.8	□□□□□ -0.68
BRF1-210	ENST00000547374	DBX2	Q6ZNG2	339 aa		10.8	□□□□□ -0.68
BRF1-210	ENST00000547374	OR1L6	Q8NGR2	347 aa		10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms